RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 FRMD4BQ9Y2L6 1034 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 ADCY7P51828 1080 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 CKAP4Q07065 602 aaKnown RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 ANO6Q4KMQ2 910 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 DCAF15Q66K64 600 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 PRDM10Q9NQV6 1147 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 USP40Q9NVE5 1235 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 IKBKGQ9Y6K9 419 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 TCP10Q12799 353 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 PRKG1Q13976 671 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 CCDC129Q6ZRS4 1044 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 MAPKAPK5Q8IW41 473 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 CCDC117Q8IWD4 279 aaPredicted RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 NEK11Q8NG66 645 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 SRP68Q9UHB9 627 aaKnown RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 EXOC7Q9UPT5 735 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 KDRP35968 1356 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 CHD2O14647 1828 aaKnown RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 FMN2Q9NZ56 1722 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 SLC27A2O14975 620 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 GTF2IP78347 998 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 NKX1-1Q15270 411 aaPredicted RBP9.5□□□□□ -0.89
UBR4-206ENST00000419533 ZSCAN23Q3MJ62 389 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 FAM200AQ8TCP9 573 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 TGFBRAP1Q8WUH2 860 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 LLPHQ9BRT6 129 aaKnown RBP9.5□□□□□ -0.89
UBR4-206ENST00000419533 AZI2Q9H6S1 392 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 TTF2Q9UNY4 1162 aaKnown RBP9.5□□□□□ -0.89
UBR4-206ENST00000419533 CNTNAP4Q9C0A0 1308 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 XRCC6P12956 609 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBR4-206ENST00000419533 MFSD14BQ5SR56 506 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBR4-206ENST00000419533 ZNF532Q9HCE3 1301 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 SHTN1A0MZ66 631 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 MYCLP12524 364 aaPredicted RBP9.5□□□□□ -0.89
UBR4-206ENST00000419533 ZNF174Q15697 407 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 DPH6Q7L8W6 267 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 KRT25Q7Z3Z0 450 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 CDAN1Q8IWY9 1227 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 FNBP1Q96RU3 617 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 TMX1Q9H3N1 280 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 RASAL2Q9UJF2 1139 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 CBX1P83916 185 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 STRN3Q13033 797 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 SMCR8Q8TEV9 937 aaPredicted RBP9.5□□□□□ -0.89
UBR4-206ENST00000419533 USP26Q9BXU7 913 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 CYP19A1P11511 503 aaPredicted RBP9.5□□□□□ -0.89
UBR4-206ENST00000419533 ZAP70P43403 619 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 KRT83P78385 493 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 PABPC4Q13310 644 aaKnown RBP eCLIP9.5□□□□□ -0.89
UBR4-206ENST00000419533 WDR44Q5JSH3 913 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 TTLL7Q6ZT98 887 aa9.5□□□□□ -0.89
UBR4-206ENST00000419533 V9GY48 417 aaPredicted RBP9.5□□□□□ -0.89
UBR4-206ENST00000419533 VWA3AA6NCI4 1184 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 CHMP2AO43633 222 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 EPB41P11171 864 aaKnown RBP9.49□□□□□ -0.89
UBR4-206ENST00000419533 AOPEPQ8N6M6 819 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 RGS22Q8NE09 1264 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 CHURC1Q8WUH1 139 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 XRN1Q8IZH2 1706 aaKnown RBP9.49□□□□□ -0.89
UBR4-206ENST00000419533 PXDNQ92626 1479 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 CCNT1O60563 726 aaKnown RBP9.49□□□□□ -0.89
UBR4-206ENST00000419533 TACC1O75410 805 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 SLC8A3P57103 927 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 KIF22Q14807 665 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 PLEKHF1Q96S99 279 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 BCCIPQ9P287 314 aaKnown RBP eCLIP9.49□□□□□ -0.89
UBR4-206ENST00000419533 ELP1O95163 1332 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 PRDM1O75626 825 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 GNG11P61952 73 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 NONOQ15233 471 aaKnown RBP eCLIP9.49□□□□□ -0.89
UBR4-206ENST00000419533 PIK3AP1Q6ZUJ8 805 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 SREK1Q8WXA9 508 aaKnown RBP9.49□□□□□ -0.89
UBR4-206ENST00000419533 DCPSQ96C86 337 aaKnown RBP9.49□□□□□ -0.89
UBR4-206ENST00000419533 ARHGEF35A5YM69 484 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 M0QZ92 97 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 EEF2P13639 858 aaKnown RBP9.49□□□□□ -0.89
UBR4-206ENST00000419533 PNMA2Q9UL42 364 aa9.49□□□□□ -0.89
UBR4-206ENST00000419533 MED1Q15648 1581 aaPredicted RBP9.48□□□□□ -0.89
UBR4-206ENST00000419533 CCDC169A6NNP5 214 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 DNM2P50570 870 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 TTC16Q8NEE8 873 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 C16orf45Q96MC5 204 aaPredicted RBP9.48□□□□□ -0.89
UBR4-206ENST00000419533 PLEKHG2Q9H7P9 1386 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 ATP5JP18859 108 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 CALRP27797 417 aaKnown RBP9.48□□□□□ -0.89
UBR4-206ENST00000419533 UBXN1Q04323 297 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 AKNAD1Q5T1N1 836 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 NSMFQ6X4W1 530 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 CPXCR1Q8N123 301 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 INCENPQ9NQS7 918 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 CNNM4Q6P4Q7 775 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 PLIN2Q99541 437 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 SPC25Q9HBM1 224 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 CALUO43852 315 aaPredicted RBP9.48□□□□□ -0.89
UBR4-206ENST00000419533 FERP16591 822 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 BIRC3Q13489 604 aa9.48□□□□□ -0.89
UBR4-206ENST00000419533 MCTP2Q6DN12 878 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms