RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 USP17L1Q7RTZ2 530 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 CERS3Q8IU89 383 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 SH3RF3Q8TEJ3 882 aaPredicted RBP15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 CBX8Q9HC52 389 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 DCP1AQ9NPI6 582 aaPredicted RBP15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 ST7Q9NRC1 585 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 ZNF446Q9NWS9 450 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 SMC3Q9UQE7 1217 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 NAV1Q8NEY1 1877 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 SLU7O95391 586 aaKnown RBP15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 MB21D2Q8IYB1 491 aaPredicted RBP15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 NCOA7Q8NI08 942 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 LARP6Q9BRS8 491 aaKnown RBP15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 ANAPC4Q9UJX5 808 aa15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 TTF2Q9UNY4 1162 aaKnown RBP15.35■□□□□ 0.05
SFTPA1-202ENST00000419470 H2AFXP16104 143 aaPredicted RBP15.34■□□□□ 0.05
SFTPA1-202ENST00000419470 BTDP43251 543 aa15.34■□□□□ 0.05
SFTPA1-202ENST00000419470 DNM1Q05193 864 aaKnown RBP15.34■□□□□ 0.05
SFTPA1-202ENST00000419470 NLGN2Q8NFZ4 835 aa15.34■□□□□ 0.05
SFTPA1-202ENST00000419470 CLIP2Q9UDT6 1046 aa15.34■□□□□ 0.05
SFTPA1-202ENST00000419470 MKRN1Q9UHC7 482 aaKnown RBP15.34■□□□□ 0.05
SFTPA1-202ENST00000419470 DAGLAQ9Y4D2 1042 aa15.34■□□□□ 0.05
SFTPA1-202ENST00000419470 F8W031 263 aaPredicted RBP15.33■□□□□ 0.05
SFTPA1-202ENST00000419470 KIF2AO00139 706 aaPredicted RBP15.33■□□□□ 0.05
SFTPA1-202ENST00000419470 CTDSPL2Q05D32 466 aa15.33■□□□□ 0.05
SFTPA1-202ENST00000419470 PPARAQ07869 468 aa15.33■□□□□ 0.05
SFTPA1-202ENST00000419470 MUM1L1Q5H9M0 696 aa15.33■□□□□ 0.05
SFTPA1-202ENST00000419470 Q6ZUG5 572 aa15.33■□□□□ 0.05
SFTPA1-202ENST00000419470 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.05
SFTPA1-202ENST00000419470 AGXT2Q9BYV1 514 aa15.33■□□□□ 0.05
SFTPA1-202ENST00000419470 TACC3Q9Y6A5 838 aa15.33■□□□□ 0.05
SFTPA1-202ENST00000419470 NEDD4P46934 1319 aa15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 ECM29Q5VYK3 1845 aa15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 RHBDL3P58872 404 aa15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 AKNAD1Q5T1N1 836 aa15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 CTR9Q6PD62 1173 aa15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 PAXIP1Q6ZW49 1069 aaPredicted RBP15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 RALYLQ86SE5 291 aaKnown RBP15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 FBXL16Q8N461 479 aa15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 STAG1Q8WVM7 1258 aa15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 TPCN1Q9ULQ1 816 aa15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 BCS1LQ9Y276 419 aa15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 DDX60LQ5H9U9 1706 aaKnown RBP15.33■□□□□ 0.04
SFTPA1-202ENST00000419470 ELP1O95163 1332 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 WDR19Q8NEZ3 1342 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 USP17L12C9JPN9 530 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 USP17L21D6R901 530 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 NFKBIEO00221 500 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 LARGE1O95461 756 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 PLCG2P16885 1265 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 IARSP41252 1262 aaKnown RBP15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 TRDNQ13061 729 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 ANO6Q4KMQ2 910 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 TEX35Q5T0J7 233 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 HHIPL2Q6UWX4 724 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 LRRC8AQ8IWT6 810 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 ZSCAN31Q96LW9 406 aaPredicted RBP15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 LRRC2Q9BYS8 371 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 TAOK3Q9H2K8 898 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 YY1AP1Q9H869 796 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 V9GYY5 206 aaPredicted RBP15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 MYH1P12882 1939 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 UTRNP46939 3433 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 MINDY4BA8MYZ0 360 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 ANTXR2P58335 489 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 CHST3Q7LGC8 479 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 TXLNBQ8N3L3 684 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 NKX2-3Q8TAU0 364 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 MRIQ9BWK5 157 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 INCENPQ9NQS7 918 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 SH2B1Q9NRF2 756 aaPredicted RBP15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 KCND1Q9NSA2 647 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 MTMR6Q9Y217 621 aa15.32■□□□□ 0.04
SFTPA1-202ENST00000419470 SMIM22K7EJ46 135 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 CAVIN2O95810 425 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 SCNN1DP51172 638 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 ME3Q16798 604 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 SBK1Q52WX2 424 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 RBM43Q6ZSC3 357 aaKnown RBP15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 MFSD6Q6ZSS7 791 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 KIAA0825Q8IV33 1275 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 CNNM2Q9H8M5 875 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 ARPP21Q9UBL0 812 aaPredicted RBP15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 FHOD1Q9Y613 1164 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 CYP2D7A0A087X1C5 515 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 B4E1Z4 1266 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 USP5P45974 858 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 TEX2Q8IWB9 1127 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 TGFBRAP1Q8WUH2 860 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 TEKT1Q969V4 418 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 TNMDQ9H2S6 317 aa15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 RNF41Q9H4P4 317 aaPredicted RBP15.31■□□□□ 0.04
SFTPA1-202ENST00000419470 PRC1O43663 620 aa15.3■□□□□ 0.04
SFTPA1-202ENST00000419470 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
SFTPA1-202ENST00000419470 HDLBPQ00341 1268 aaKnown RBP15.3■□□□□ 0.04
SFTPA1-202ENST00000419470 CCDC144BQ3MJ40 725 aa15.3■□□□□ 0.04
SFTPA1-202ENST00000419470 CCDC144CPQ8IYA2 1237 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms