RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 BACE1P56817 501 aa19.88■□□□□ 0.77
LINC00404-201ENST00000418660 PABPC4Q13310 644 aaKnown RBP eCLIP19.88■□□□□ 0.77
LINC00404-201ENST00000418660 SHROOM1Q2M3G4 852 aaPredicted RBP19.88■□□□□ 0.77
LINC00404-201ENST00000418660 DCP1AQ9NPI6 582 aaPredicted RBP19.88■□□□□ 0.77
LINC00404-201ENST00000418660 PNMA3Q9UL41 463 aa19.88■□□□□ 0.77
LINC00404-201ENST00000418660 C19orf81C9J6K1 198 aa19.87■□□□□ 0.77
LINC00404-201ENST00000418660 GH2P01242 217 aa19.87■□□□□ 0.77
LINC00404-201ENST00000418660 CHGBP05060 677 aa19.87■□□□□ 0.77
LINC00404-201ENST00000418660 PSMC4P43686 418 aa19.87■□□□□ 0.77
LINC00404-201ENST00000418660 PRMT2P55345 433 aa19.87■□□□□ 0.77
LINC00404-201ENST00000418660 AAMPQ13685 434 aa19.87■□□□□ 0.77
LINC00404-201ENST00000418660 SMCR8Q8TEV9 937 aaPredicted RBP19.87■□□□□ 0.77
LINC00404-201ENST00000418660 ATP8A2Q9NTI2 1148 aa19.87■□□□□ 0.77
LINC00404-201ENST00000418660 PTCH2Q9Y6C5 1203 aa19.87■□□□□ 0.77
LINC00404-201ENST00000418660 DDX60LQ5H9U9 1706 aaKnown RBP19.87■□□□□ 0.77
LINC00404-201ENST00000418660 TTC41PQ6P2S7 1318 aa19.86■□□□□ 0.77
LINC00404-201ENST00000418660 CTGFP29279 349 aa19.86■□□□□ 0.77
LINC00404-201ENST00000418660 GABPAQ06546 454 aa19.86■□□□□ 0.77
LINC00404-201ENST00000418660 MTMR2Q13614 643 aa19.86■□□□□ 0.77
LINC00404-201ENST00000418660 CERKLQ49MI3 558 aaPredicted RBP19.86■□□□□ 0.77
LINC00404-201ENST00000418660 TSHZ3Q63HK5 1081 aa19.86■□□□□ 0.77
LINC00404-201ENST00000418660 KBTBD3Q8NAB2 608 aa19.86■□□□□ 0.77
LINC00404-201ENST00000418660 ARMC5Q96C12 935 aa19.86■□□□□ 0.77
LINC00404-201ENST00000418660 TRIM47Q96LD4 638 aa19.86■□□□□ 0.77
LINC00404-201ENST00000418660 TMOD4Q9NZQ9 345 aa19.86■□□□□ 0.77
LINC00404-201ENST00000418660 LOC285556D6RIA3 1793 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 USP17L10C9JJH3 530 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 PRKAB2O43741 272 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 FMNL1O95466 1100 aaPredicted RBP19.85■□□□□ 0.77
LINC00404-201ENST00000418660 OSBPP22059 807 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 HOXD10P28358 340 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 SHMT1P34896 483 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 HDAC1Q13547 482 aaPredicted RBP19.85■□□□□ 0.77
LINC00404-201ENST00000418660 ABCB5Q2M3G0 1257 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 SRRDQ9UH36 339 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 TAOK2Q9UL54 1235 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 NAV1Q8NEY1 1877 aa19.85■□□□□ 0.77
LINC00404-201ENST00000418660 ZSWIM8A7E2V4 1837 aa19.84■□□□□ 0.77
LINC00404-201ENST00000418660 ERC2O15083 957 aa19.84■□□□□ 0.77
LINC00404-201ENST00000418660 ECM2O94769 699 aaPredicted RBP19.84■□□□□ 0.77
LINC00404-201ENST00000418660 FCGRTP55899 365 aa19.84■□□□□ 0.77
LINC00404-201ENST00000418660 NBPF11Q86T75 865 aa19.84■□□□□ 0.77
LINC00404-201ENST00000418660 GCC1Q96CN9 775 aa19.84■□□□□ 0.77
LINC00404-201ENST00000418660 PUS7LQ9H0K6 701 aaKnown RBP19.84■□□□□ 0.77
LINC00404-201ENST00000418660 CABP5Q9NP86 173 aa19.84■□□□□ 0.77
LINC00404-201ENST00000418660 GLRX3O76003 335 aaKnown RBP19.83■□□□□ 0.77
LINC00404-201ENST00000418660 HOXA7P31268 230 aaPredicted RBP19.83■□□□□ 0.77
LINC00404-201ENST00000418660 GCLCP48506 637 aaPredicted RBP19.83■□□□□ 0.77
LINC00404-201ENST00000418660 EVX2Q03828 476 aa19.83■□□□□ 0.77
LINC00404-201ENST00000418660 SLC9C1Q4G0N8 1177 aa19.83■□□□□ 0.77
LINC00404-201ENST00000418660 ANKRD45Q5TZF3 282 aa19.83■□□□□ 0.77
LINC00404-201ENST00000418660 PI4K2BQ8TCG2 481 aa19.83■□□□□ 0.77
LINC00404-201ENST00000418660 OTUD7AQ8TE49 926 aaPredicted RBP19.83■□□□□ 0.77
LINC00404-201ENST00000418660 ASCC2Q9H1I8 757 aaPredicted RBP19.83■□□□□ 0.77
LINC00404-201ENST00000418660 ZBTB47Q9UFB7 747 aaPredicted RBP19.83■□□□□ 0.77
LINC00404-201ENST00000418660 SLC4A4Q9Y6R1 1079 aa19.83■□□□□ 0.77
LINC00404-201ENST00000418660 MYH7P12883 1935 aa19.82■□□□□ 0.76
LINC00404-201ENST00000418660 RNF113AO15541 343 aaKnown RBP19.82■□□□□ 0.76
LINC00404-201ENST00000418660 ZFYP08048 801 aaPredicted RBP19.82■□□□□ 0.76
LINC00404-201ENST00000418660 CYP2D6P10635 497 aa19.82■□□□□ 0.76
LINC00404-201ENST00000418660 RAB3GAP1Q15042 981 aa19.82■□□□□ 0.76
LINC00404-201ENST00000418660 USP17L2Q6R6M4 530 aa19.82■□□□□ 0.76
LINC00404-201ENST00000418660 DDRGK1Q96HY6 314 aa19.82■□□□□ 0.76
LINC00404-201ENST00000418660 SWAP70Q9UH65 585 aa19.82■□□□□ 0.76
LINC00404-201ENST00000418660 MX1P20591 662 aa19.81■□□□□ 0.76
LINC00404-201ENST00000418660 FAM110CQ1W6H9 321 aa19.81■□□□□ 0.76
LINC00404-201ENST00000418660 LRRFIP1Q32MZ4 808 aaKnown RBP19.81■□□□□ 0.76
LINC00404-201ENST00000418660 C12orf60Q5U649 245 aa19.81■□□□□ 0.76
LINC00404-201ENST00000418660 AMOTL1Q8IY63 956 aa19.81■□□□□ 0.76
LINC00404-201ENST00000418660 ANKRD13CQ8N6S4 541 aa19.81■□□□□ 0.76
LINC00404-201ENST00000418660 APPBP2Q92624 585 aa19.81■□□□□ 0.76
LINC00404-201ENST00000418660 ZNF333Q96JL9 665 aa19.81■□□□□ 0.76
LINC00404-201ENST00000418660 STRBPQ96SI9 672 aaKnown RBP19.81■□□□□ 0.76
LINC00404-201ENST00000418660 EMILIN3Q9NT22 766 aa19.81■□□□□ 0.76
LINC00404-201ENST00000418660 MYPNQ86TC9 1320 aa19.8■□□□□ 0.76
LINC00404-201ENST00000418660 USP17L12C9JPN9 530 aa19.8■□□□□ 0.76
LINC00404-201ENST00000418660 USP17L21D6R901 530 aa19.8■□□□□ 0.76
LINC00404-201ENST00000418660 IRX3P78415 501 aaPredicted RBP19.8■□□□□ 0.76
LINC00404-201ENST00000418660 C12orf42Q96LP6 360 aa19.8■□□□□ 0.76
LINC00404-201ENST00000418660 SALL3Q9BXA9 1300 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 GUCY1A2P33402 732 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 USP14P54578 494 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 SLC44A5Q8NCS7 719 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 RAET1EQ8TD07 263 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 SH3TC2Q8TF17 1288 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 OSBP2Q969R2 916 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 DYNLL2Q96FJ2 89 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 P2RX7Q99572 595 aaKnown RBP19.79■□□□□ 0.76
LINC00404-201ENST00000418660 FEZ1Q99689 392 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 KIAA1683Q9H0B3 1180 aa19.79■□□□□ 0.76
LINC00404-201ENST00000418660 CYP2D7A0A087X1C5 515 aa19.78■□□□□ 0.76
LINC00404-201ENST00000418660 MPHOSPH10O00566 681 aaKnown RBP19.78■□□□□ 0.76
LINC00404-201ENST00000418660 PRKCZQ05513 592 aa19.78■□□□□ 0.76
LINC00404-201ENST00000418660 SEPT2Q15019 361 aa19.78■□□□□ 0.76
LINC00404-201ENST00000418660 CTR9Q6PD62 1173 aa19.78■□□□□ 0.76
LINC00404-201ENST00000418660 ACER1Q8TDN7 264 aa19.78■□□□□ 0.76
LINC00404-201ENST00000418660 TMEM106CQ9BVX2 250 aa19.78■□□□□ 0.76
LINC00404-201ENST00000418660 RWDD1Q9H446 243 aaPredicted RBP19.78■□□□□ 0.76
LINC00404-201ENST00000418660 MORF4L1Q9UBU8 362 aa19.78■□□□□ 0.76
LINC00404-201ENST00000418660 POTEFA5A3E0 1075 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms