RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 TRIM7Q9C029 511 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 ZSCAN16Q9H4T2 348 aaPredicted RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 SEPT3Q9UH03 358 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 SHTN1A0MZ66 631 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 EIF3CLB5ME19 914 aaKnown RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 SH3BP5O60239 455 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 VDRP11473 427 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 VCAM1P19320 739 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 ELOA2Q8IYF1 753 aaPredicted RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 EIF3CQ99613 913 aaKnown RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 PHAXQ9H814 394 aaKnown RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 PRDM11Q9NQV5 511 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 LAMB2P55268 1798 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 PI4KAP2A4QPH2 592 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 KCNQ3O43525 872 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 MNAT1P51948 309 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 EIF5P55010 431 aaKnown RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 TRIM28Q13263 835 aaKnown RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 PTK7Q13308 1070 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 ACBD5Q5T8D3 534 aaPredicted RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 PI4KAP1Q8N8J0 262 aa10.16□□□□□ -0.78
SP140-204ENST00000417495 CCDC85AQ96PX6 553 aaPredicted RBP10.16□□□□□ -0.78
SP140-204ENST00000417495 GRM8O00222 908 aa10.15□□□□□ -0.78
SP140-204ENST00000417495 FMNL1O95466 1100 aaPredicted RBP10.15□□□□□ -0.78
SP140-204ENST00000417495 AMPD3Q01432 767 aa10.15□□□□□ -0.78
SP140-204ENST00000417495 RAB3GAP1Q15042 981 aa10.15□□□□□ -0.78
SP140-204ENST00000417495 RNF20Q5VTR2 975 aa10.15□□□□□ -0.78
SP140-204ENST00000417495 CLEC4GQ6UXB4 293 aa10.15□□□□□ -0.78
SP140-204ENST00000417495 PLBD2Q8NHP8 589 aa10.15□□□□□ -0.78
SP140-204ENST00000417495 ASB16Q96NS5 453 aa10.15□□□□□ -0.78
SP140-204ENST00000417495 USP26Q9BXU7 913 aa10.15□□□□□ -0.78
SP140-204ENST00000417495 MX1P20591 662 aa10.15□□□□□ -0.79
SP140-204ENST00000417495 PTGER2P43116 358 aa10.15□□□□□ -0.79
SP140-204ENST00000417495 MCM2P49736 904 aa10.15□□□□□ -0.79
SP140-204ENST00000417495 ANKRD18AQ8IVF6 992 aa10.15□□□□□ -0.79
SP140-204ENST00000417495 JDP2Q8WYK2 163 aa10.15□□□□□ -0.79
SP140-204ENST00000417495 KIF12Q96FN5 646 aa10.15□□□□□ -0.79
SP140-204ENST00000417495 TTF2Q9UNY4 1162 aaKnown RBP10.15□□□□□ -0.79
SP140-204ENST00000417495 ERC2O15083 957 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 SDSP20132 328 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 CCNHP51946 323 aaPredicted RBP10.14□□□□□ -0.79
SP140-204ENST00000417495 CABP4P57796 275 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 SFSWAPQ12872 951 aaKnown RBP10.14□□□□□ -0.79
SP140-204ENST00000417495 KMT5BQ4FZB7 885 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 SLC4A10Q6U841 1118 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 TTC5Q8N0Z6 440 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 ZNF594Q96JF6 807 aaPredicted RBP10.14□□□□□ -0.79
SP140-204ENST00000417495 UNC45AQ9H3U1 944 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 RETREG1Q9H6L5 497 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 KIF2AO00139 706 aaPredicted RBP10.14□□□□□ -0.79
SP140-204ENST00000417495 SOCS7O14512 581 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 MAP3K7O43318 606 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 TIMM44O43615 452 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 CCDC175P0C221 793 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 GJC2Q5T442 439 aaPredicted RBP10.14□□□□□ -0.79
SP140-204ENST00000417495 PRM3Q9NNZ6 103 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 GPR108Q9NPR9 543 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 MAP3K2Q9Y2U5 619 aa10.14□□□□□ -0.79
SP140-204ENST00000417495 BCL9O00512 1426 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 PNMA6EA0A0J9YXQ4 647 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 RTN2O75298 545 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 NBPF7P0C2Y1 421 aaPredicted RBP10.13□□□□□ -0.79
SP140-204ENST00000417495 PPP1R42Q7Z4L9 355 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 NBPF15Q8N660 670 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 SPDYE1Q8NFV5 336 aaPredicted RBP10.13□□□□□ -0.79
SP140-204ENST00000417495 TCP11Q8WWU5 503 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 COPRSQ9NQ92 184 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 SLIT2O94813 1529 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 LRP5O75197 1615 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 NEURL1BA8MQ27 555 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 H7C1W4 665 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 ZNF24P17028 368 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 TPP2P29144 1249 aaPredicted RBP10.13□□□□□ -0.79
SP140-204ENST00000417495 MRPL12P52815 198 aaKnown RBP10.13□□□□□ -0.79
SP140-204ENST00000417495 SESN3P58005 492 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 DBN1Q16643 649 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 PADI6Q6TGC4 694 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 HSCBQ8IWL3 235 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 RHPN1Q8TCX5 695 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 FAM163AQ96GL9 167 aaPredicted RBP10.13□□□□□ -0.79
SP140-204ENST00000417495 AGBL1Q96MI9 1066 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 RPS6KC1Q96S38 1066 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 IRX2Q9BZI1 471 aaPredicted RBP10.13□□□□□ -0.79
SP140-204ENST00000417495 TRPV5Q9NQA5 729 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 CHST12Q9NRB3 414 aa10.13□□□□□ -0.79
SP140-204ENST00000417495 DDX56Q9NY93 547 aaKnown RBP10.13□□□□□ -0.79
SP140-204ENST00000417495 HIP1O00291 1037 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 RPS6KA5O75582 802 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 COPB2P35606 906 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 CASP7P55210 303 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 RACK1P63244 317 aaKnown RBP10.12□□□□□ -0.79
SP140-204ENST00000417495 ZSCAN23Q3MJ62 389 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 STAG2Q8N3U4 1231 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 TMC2Q8TDI7 906 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 ZNF496Q96IT1 587 aaPredicted RBP10.12□□□□□ -0.79
SP140-204ENST00000417495 MKNK1Q9BUB5 465 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 PLA2G12BQ9BX93 195 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 ST7Q9NRC1 585 aa10.12□□□□□ -0.79
SP140-204ENST00000417495 MCM8Q9UJA3 840 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms