RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 GIMAP6Q6P9H5 292 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 LCORLQ8N3X6 602 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 SMCR8Q8TEV9 937 aaPredicted RBP13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 APPBP2Q92624 585 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 ARMT1Q9H993 441 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 ZBTB21Q9ULJ3 1066 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 TRIM17Q9Y577 477 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 SLC4A4Q9Y6R1 1079 aa13.16□□□□□ -0.3
SNRNP25-204ENST00000417493 MGAMO43451 1857 aa13.15□□□□□ -0.3
SNRNP25-204ENST00000417493 USP14P54578 494 aa13.15□□□□□ -0.3
SNRNP25-204ENST00000417493 ABCB5Q2M3G0 1257 aa13.15□□□□□ -0.3
SNRNP25-204ENST00000417493 TATDN1Q6P1N9 297 aa13.15□□□□□ -0.3
SNRNP25-204ENST00000417493 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
SNRNP25-204ENST00000417493 FEZ1Q99689 392 aa13.15□□□□□ -0.3
SNRNP25-204ENST00000417493 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
SNRNP25-204ENST00000417493 R3HDMLQ9H3Y0 253 aa13.15□□□□□ -0.3
SNRNP25-204ENST00000417493 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
SNRNP25-204ENST00000417493 GCLCP48506 637 aaPredicted RBP13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 BACE1P56817 501 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 SH3D19Q5HYK7 790 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 OTOP1Q7RTM1 612 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 SMC5Q8IY18 1101 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 EXOC6Q8TAG9 804 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 PI4K2BQ8TCG2 481 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 SDR42E1Q8WUS8 393 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 EVI5LQ96CN4 794 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 CCDC17Q96LX7 622 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 SH2D4AQ9H788 454 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 STAP2Q9UGK3 403 aa13.14□□□□□ -0.31
SNRNP25-204ENST00000417493 GDF11O95390 407 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 GH2P01242 217 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 PLCD1P51178 756 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 HMGCS2P54868 508 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 IRX3P78415 501 aaPredicted RBP13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 MOGSQ13724 837 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 SLC4A8Q2Y0W8 1093 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 GPAT2Q6NUI2 795 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 USP17L2Q6R6M4 530 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 C17orf99Q6UX52 265 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 NBPF11Q86T75 865 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 DNAJC18Q9H819 358 aa13.13□□□□□ -0.31
SNRNP25-204ENST00000417493 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 SLC3A2P08195 630 aaKnown RBP13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 PDE1AP54750 535 aa13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 FCGRTP55899 365 aa13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 GABPAQ06546 454 aa13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 MTMR2Q13614 643 aa13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 RAB3GAP1Q15042 981 aa13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 TMEM179Q6ZVK1 233 aa13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 CHD1LQ86WJ1 897 aa13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 STRBPQ96SI9 672 aaKnown RBP13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 PUS7LQ9H0K6 701 aaKnown RBP13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 HPS5Q9UPZ3 1129 aa13.12□□□□□ -0.31
SNRNP25-204ENST00000417493 USP17L12C9JPN9 530 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 USP17L21D6R901 530 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 GPAA1O43292 621 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 FMNL1O95466 1100 aaPredicted RBP13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 APPP05067 770 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 SLURP2P0DP57 97 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 SHMT1P34896 483 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 TDO2P48775 406 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 SBK1Q52WX2 424 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 C12orf60Q5U649 245 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 LNPKQ9C0E8 428 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 ARHGEF10LQ9HCE6 1279 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 CPA4Q9UI42 421 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 PTPN22Q9Y2R2 807 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 SALL3Q9BXA9 1300 aa13.11□□□□□ -0.31
SNRNP25-204ENST00000417493 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 PRKAB2O43741 272 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 CYP2C8P10632 490 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 HOXA7P31268 230 aaPredicted RBP13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 PSMC4P43686 418 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 NUCB1Q02818 461 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 FAM110CQ1W6H9 321 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 B4GALNT3Q6L9W6 998 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 CCDC84Q86UT8 332 aaPredicted RBP13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 OSBP2Q969R2 916 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 MKNK2Q9HBH9 465 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 ADGRA2Q96PE1 1338 aa13.1□□□□□ -0.31
SNRNP25-204ENST00000417493 TRIM6-TRIM34B2RNG4 842 aa13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 HIP1O00291 1037 aa13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 BCRP11274 1271 aa13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 SLC9C1Q4G0N8 1177 aa13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 ZMYM1Q5SVZ6 1142 aa13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 C16orf86Q6ZW13 317 aa13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 OTUD7AQ8TE49 926 aaPredicted RBP13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 COA7Q96BR5 231 aa13.09□□□□□ -0.31
SNRNP25-204ENST00000417493 C12orf42Q96LP6 360 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms