RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 CRACR2BQ8N4Y2 399 aaPredicted RBP22.36■■□□□ 1.17
RAB3IP-205ENST00000417413 ZNF396Q96N95 335 aaPredicted RBP22.36■■□□□ 1.17
RAB3IP-205ENST00000417413 SPON1Q9HCB6 807 aa22.36■■□□□ 1.17
RAB3IP-205ENST00000417413 PIM2Q9P1W9 311 aa22.36■■□□□ 1.17
RAB3IP-205ENST00000417413 SAP30BPQ9UHR5 308 aaKnown RBP22.36■■□□□ 1.17
RAB3IP-205ENST00000417413 KIF28PB7ZC32 967 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 G3V3G9 751 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 UBE2Q2LH0YL09 131 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 KIF23Q02241 960 aaPredicted RBP22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 TROAPQ12815 778 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 TPRNQ4KMQ1 711 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 CCDC183Q5T5S1 534 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 DCAF8Q5TAQ9 597 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 KRT40Q6A162 431 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 CATIPQ7Z7H3 387 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 PGBD1Q96JS3 809 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 USP28Q96RU2 1077 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 SGIP1Q9BQI5 828 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 DBNDD1Q9H9R9 158 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 KIF13BQ9NQT8 1826 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 TSPY2A6NKD2 308 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 DDAH1O94760 285 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 POLR3DP05423 398 aaPredicted RBP22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 RCSD1Q6JBY9 416 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 BRAPQ7Z569 592 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 RTKN2Q8IZC4 609 aa22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 ZNF219Q9P2Y4 722 aaPredicted RBP22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 TTF2Q9UNY4 1162 aaKnown RBP22.35■■□□□ 1.17
RAB3IP-205ENST00000417413 CALM1P0DP23 149 aa22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 CALM2P0DP24 149 aa22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 CALM3P0DP25 149 aa22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 TFAP4Q01664 338 aa22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 CCDC93Q567U6 631 aa22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 ILDR2Q71H61 639 aa22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 WASF1Q92558 559 aa22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 FTOQ9C0B1 505 aaKnown RBP eCLIP22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 KCNQ5Q9NR82 932 aa22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 PPP1R1BQ9UD71 204 aaPredicted RBP22.34■■□□□ 1.17
RAB3IP-205ENST00000417413 F8W031 263 aaPredicted RBP22.33■■□□□ 1.17
RAB3IP-205ENST00000417413 GUCY1A2P33402 732 aa22.33■■□□□ 1.17
RAB3IP-205ENST00000417413 FKBP1AP62942 108 aaKnown RBP22.33■■□□□ 1.17
RAB3IP-205ENST00000417413 FUT2Q10981 343 aa22.33■■□□□ 1.17
RAB3IP-205ENST00000417413 TRIM22Q8IYM9 498 aa22.33■■□□□ 1.17
RAB3IP-205ENST00000417413 ANKS1AQ92625 1134 aa22.33■■□□□ 1.17
RAB3IP-205ENST00000417413 IL17RBQ9NRM6 502 aa22.33■■□□□ 1.17
RAB3IP-205ENST00000417413 PTGER2P43116 358 aa22.32■■□□□ 1.16
RAB3IP-205ENST00000417413 HHIPL2Q6UWX4 724 aa22.32■■□□□ 1.16
RAB3IP-205ENST00000417413 C16orf86Q6ZW13 317 aa22.32■■□□□ 1.16
RAB3IP-205ENST00000417413 CMTR1Q8N1G2 835 aaKnown RBP22.32■■□□□ 1.16
RAB3IP-205ENST00000417413 MKNK2Q9HBH9 465 aa22.32■■□□□ 1.16
RAB3IP-205ENST00000417413 TCP11L1Q9NUJ3 509 aa22.32■■□□□ 1.16
RAB3IP-205ENST00000417413 RTEL1Q9NZ71 1219 aa22.32■■□□□ 1.16
RAB3IP-205ENST00000417413 ECE2O60344 883 aa22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 DEXIO95424 95 aa22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 LIG1P18858 919 aa22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 RASA1P20936 1047 aa22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 CEBPZQ03701 1054 aaKnown RBP22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 DALRD3Q5D0E6 543 aaKnown RBP22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 STRIP1Q5VSL9 837 aa22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 MYSM1Q5VVJ2 828 aa22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 SLC44A5Q8NCS7 719 aa22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 PANK2Q9BZ23 570 aa22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 RBM28Q9NW13 759 aaKnown RBP22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 DGKHQ86XP1 1220 aa22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 RNF26Q9BY78 433 aaPredicted RBP22.31■■□□□ 1.16
RAB3IP-205ENST00000417413 PSME4Q14997 1843 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 C21orf2O43822 256 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 LETM1O95202 739 aaPredicted RBP22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 KCNA3P22001 575 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 CDK8P49336 464 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 SCNN1DP51172 638 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 KIAA2012Q0VF49 1180 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 TRIM29Q14134 588 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 DACT2Q5SW24 774 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 KLHL34Q8N239 644 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 RBSNQ9H1K0 784 aa22.3■■□□□ 1.16
RAB3IP-205ENST00000417413 GOLGA6L4A6NEF3 574 aa22.29■■□□□ 1.16
RAB3IP-205ENST00000417413 WDHD1O75717 1129 aaPredicted RBP22.29■■□□□ 1.16
RAB3IP-205ENST00000417413 U2AF2P26368 475 aaKnown RBP eCLIP22.29■■□□□ 1.162e-6■■□□□ 12.9
RAB3IP-205ENST00000417413 AOC3Q16853 763 aa22.29■■□□□ 1.16
RAB3IP-205ENST00000417413 CCDC178Q5BJE1 867 aa22.29■■□□□ 1.16
RAB3IP-205ENST00000417413 ZNF444Q8N0Y2 327 aaPredicted RBP22.29■■□□□ 1.16
RAB3IP-205ENST00000417413 CCDC82Q8N4S0 544 aa22.29■■□□□ 1.16
RAB3IP-205ENST00000417413 MRIQ9BWK5 157 aa22.29■■□□□ 1.16
RAB3IP-205ENST00000417413 PRPF3O43395 683 aaKnown RBP22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 PLEKHA8P1O95397 391 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 APOBEC3HQ6NTF7 200 aaKnown RBP22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 TMTC3Q6ZXV5 915 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 TEKT1Q969V4 418 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 VPS33BQ9H267 617 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 ZNF287Q9HBT7 754 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 USP40Q9NVE5 1235 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 POLR3EQ9NVU0 708 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 CLIC4Q9Y696 253 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 MYH8P13535 1937 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 USP17L3A6NCW0 530 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 USP17L4A6NCW7 530 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 NASPP49321 788 aaPredicted RBP22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 PKN1Q16512 942 aa22.28■■□□□ 1.16
RAB3IP-205ENST00000417413 CDC42EP5Q6NZY7 148 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms