RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 DNAJC18Q9H819 358 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 ZBTB21Q9ULJ3 1066 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 AFG3L2Q9Y4W6 797 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 MYH1P12882 1939 aa13.25□□□□□ -0.29
TM9SF4-203ENST00000417389 MYH7P12883 1935 aa13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 CYP2D7A0A087X1C5 515 aa13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 CAPN15O75808 1086 aa13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 DYNLL2Q96FJ2 89 aa13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 TBC1D2Q9BYX2 928 aa13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 TMOD4Q9NZQ9 345 aa13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 ARPP21Q9UBL0 812 aaPredicted RBP13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 NAV1Q8NEY1 1877 aa13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 CDK5RAP2Q96SN8 1893 aa13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 FOCADQ5VW36 1801 aa13.24□□□□□ -0.29
TM9SF4-203ENST00000417389 DOCK1Q14185 1865 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 HMGCS2P54868 508 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 EVX2Q03828 476 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 MTMR2Q13614 643 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 SHROOM1Q2M3G4 852 aaPredicted RBP13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 ZMYM1Q5SVZ6 1142 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 ANKRD23Q86SG2 305 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 METTL16Q86W50 562 aaKnown RBP13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 SLC44A5Q8NCS7 719 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 GINM1Q9NU53 330 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 SWAP70Q9UH65 585 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 CASP8AP2Q9UKL3 1982 aa13.23□□□□□ -0.29
TM9SF4-203ENST00000417389 PATL2C9JE40 543 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 SHMT1P34896 483 aa13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 ZYXQ15942 572 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 C12orf60Q5U649 245 aa13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 CTR9Q6PD62 1173 aa13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 CCDC129Q6ZRS4 1044 aa13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 CTU1Q7Z7A3 348 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 SMCR8Q8TEV9 937 aaPredicted RBP13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 PARK7Q99497 189 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 NAPBQ9H115 298 aa13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 MKNK2Q9HBH9 465 aa13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 ZCCHC17Q9NP64 241 aaKnown RBP13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
TM9SF4-203ENST00000417389 GSG1L2A8MUP6 293 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 USP17L10C9JJH3 530 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 CYP2C8P10632 490 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 JAG1P78504 1218 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 ATP2B2Q01814 1243 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 SP3Q02447 781 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 PABPC4Q13310 644 aaKnown RBP eCLIP13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 KIF22Q14807 665 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 TATDN1Q6P1N9 297 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 ERO1AQ96HE7 468 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 FAM227BQ96M60 508 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 CFHR5Q9BXR6 569 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 MCOLN1Q9GZU1 580 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 CPA4Q9UI42 421 aa13.21□□□□□ -0.29
TM9SF4-203ENST00000417389 SIPA1L1O43166 1804 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 TLR2O60603 784 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 SLC3A2P08195 630 aaKnown RBP13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 OSBPP22059 807 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 PDE4AP27815 886 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 CDK8P49336 464 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 BACE1P56817 501 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 NMIQ13287 307 aaPredicted RBP13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 ARHGEF6Q15052 776 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 MCMDC2Q4G0Z9 681 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 GPAT2Q6NUI2 795 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 GIMAP6Q6P9H5 292 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 IFNL3Q8IZI9 196 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 PROCA1Q8NCQ7 364 aaPredicted RBP13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 CCDC136Q96JN2 1154 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 WDR18Q9BV38 432 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 OSBPL3Q9H4L5 887 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 ZNF287Q9HBT7 754 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 HELLSQ9NRZ9 838 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 PNMA3Q9UL41 463 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 AGTPBP1Q9UPW5 1226 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 TRIM17Q9Y577 477 aa13.2□□□□□ -0.3
TM9SF4-203ENST00000417389 ATAD5Q96QE3 1844 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 C19orf81C9J6K1 198 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 HIP1O00291 1037 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 RAD21O60216 631 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 SDSP20132 328 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 IRX3P78415 501 aaPredicted RBP13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 GABPAQ06546 454 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 MOGSQ13724 837 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 SEPT2Q15019 361 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 TREML2Q5T2D2 321 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 USP17L2Q6R6M4 530 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 CWC27Q6UX04 472 aaKnown RBP13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 C16orf86Q6ZW13 317 aa13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 EPB41L4AQ9HCS5 686 aaPredicted RBP13.19□□□□□ -0.3
TM9SF4-203ENST00000417389 BAZ2AQ9UIF9 1905 aaKnown RBP13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 SMIM22K7EJ46 135 aa13.18□□□□□ -0.3
TM9SF4-203ENST00000417389 AKR1B1P15121 316 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms