RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PFKFB1P16118 471 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 DIXDC1Q155Q3 683 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 LONRF2Q1L5Z9 754 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 DZIP3Q86Y13 1208 aaKnown RBP13.4□□□□□ -0.26
UBR4-205ENST00000417040 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 CCDC169A6NNP5 214 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 PPFIA1Q13136 1202 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 MUM1Q2TAK8 710 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 DENND2CQ68D51 928 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 SDCCAG8Q86SQ7 713 aaPredicted RBP13.4□□□□□ -0.26
UBR4-205ENST00000417040 PPP1R13BQ96KQ4 1090 aa13.4□□□□□ -0.26
UBR4-205ENST00000417040 IFIH1Q9BYX4 1025 aaKnown RBP13.4□□□□□ -0.26
UBR4-205ENST00000417040 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
UBR4-205ENST00000417040 CLUL1Q15846 466 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 SLC9C1Q4G0N8 1177 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 RUFY4Q6ZNE9 571 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 SIRT1Q96EB6 747 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
UBR4-205ENST00000417040 DPH5Q9H2P9 285 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 VPS54Q9P1Q0 977 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 LRRC45Q96CN5 670 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 XAGE2Q96GT9 111 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 CLIC6Q96NY7 704 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 GPAA1O43292 621 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 KRT15P19012 456 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 RPS6KA1Q15418 735 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 ARHGAP44Q17R89 818 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 FAM89AQ96GI7 184 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 EYA1Q99502 592 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
UBR4-205ENST00000417040 CRCPO75575 148 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 ST5P78524 1137 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 BCAS4Q8TDM0 211 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 TESK2Q96S53 571 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 VCX3BQ9H321 246 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 CALUO43852 315 aaPredicted RBP13.39□□□□□ -0.27
UBR4-205ENST00000417040 RPL13P26373 211 aaKnown RBP13.39□□□□□ -0.27
UBR4-205ENST00000417040 KLHL30Q0D2K2 578 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 FCHSD1Q86WN1 690 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 LRRC43Q8N309 656 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 LSM14BQ9BX40 385 aaKnown RBP13.39□□□□□ -0.27
UBR4-205ENST00000417040 TPCN1Q9ULQ1 816 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 USP19O94966 1318 aa13.39□□□□□ -0.27
UBR4-205ENST00000417040 ENC1O14682 589 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 SFMBT2Q5VUG0 894 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 KIFC2Q96AC6 838 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 SUCLG2Q96I99 432 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.38□□□□□ -0.273e-6■■■□□ 17.1
UBR4-205ENST00000417040 PEX26Q7Z412 305 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 VPS37BQ9H9H4 285 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 ANGEL1Q9UNK9 670 aaKnown RBP13.38□□□□□ -0.27
UBR4-205ENST00000417040 A0A1W2PP64 1363 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 RIMS2Q9UQ26 1411 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 TTC36A6NLP5 189 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 CLTAP09496 248 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 ITIH3Q06033 890 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 NUP58Q9BVL2 599 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 VEZTQ9HBM0 779 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 KCNK3O14649 394 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 BAG2O95816 211 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 GBP7Q8N8V2 638 aaPredicted RBP13.38□□□□□ -0.27
UBR4-205ENST00000417040 CLIC4Q9Y696 253 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 TAF5LO75529 589 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 CD2BP2O95400 341 aaKnown RBP13.38□□□□□ -0.27
UBR4-205ENST00000417040 RFC1P35251 1148 aaPredicted RBP13.38□□□□□ -0.27
UBR4-205ENST00000417040 CCDC38Q502W7 563 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 ZNF804AQ7Z570 1209 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 TAB3Q8N5C8 712 aaPredicted RBP13.38□□□□□ -0.27
UBR4-205ENST00000417040 RDH13Q8NBN7 331 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 USH1CQ9Y6N9 552 aa13.38□□□□□ -0.27
UBR4-205ENST00000417040 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 E7EWF7 191 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 CASQ2O14958 399 aaPredicted RBP13.37□□□□□ -0.27
UBR4-205ENST00000417040 KCNJ12Q14500 433 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 BRD3Q15059 726 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 KIFAP3Q92845 792 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
UBR4-205ENST00000417040 RILPQ96NA2 401 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 ABCB4P21439 1286 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 VWA3BQ502W6 1294 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 WDR44Q5JSH3 913 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 FANCLQ9NW38 375 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 PIK3C2GO75747 1445 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 CD109Q6YHK3 1445 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 NDUFA8P51970 172 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 GSDMBQ8TAX9 411 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 KIF3CO14782 793 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 GOLGA8KD6RF30 607 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 ZNF853P0CG23 659 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 MORC3Q14149 939 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 GBP5Q96PP8 586 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 USP28Q96RU2 1077 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 FNBP1Q96RU3 617 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 PFDN4Q9NQP4 134 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 KIAA1468Q9P260 1216 aa13.37□□□□□ -0.27
UBR4-205ENST00000417040 EFCAB8A8MWE9 144 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms