RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 ZNF444Q8N0Y2 327 aaPredicted RBP12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 LEO1Q8WVC0 666 aaPredicted RBP12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 UBE2Q2Q8WVN8 375 aa12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 DDX60LQ5H9U9 1706 aaKnown RBP12.42□□□□□ -0.42
SMPD4P1-201ENST00000416717 TSPY3P0CV98 308 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 TSPY8P0CW00 308 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 KCNA3P22001 575 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 CACNB3P54284 484 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 SLC16A10Q8TF71 515 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 TEKT1Q969V4 418 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 DDX4Q9NQI0 724 aaKnown RBP12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 SUGT1Q9Y2Z0 365 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 KIF28PB7ZC32 967 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 PLEKHA8P1O95397 391 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 FMNL1O95466 1100 aaPredicted RBP12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 IFNAR1P17181 557 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 CRKP46108 304 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 KIAA2012Q0VF49 1180 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 DACT2Q5SW24 774 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 KRT40Q6A162 431 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 PIBF1Q8WXW3 757 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 USP28Q96RU2 1077 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 SCAND2PQ9GZW5 306 aaPredicted RBP12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 IL17RBQ9NRM6 502 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 UTRNP46939 3433 aa12.41□□□□□ -0.42
SMPD4P1-201ENST00000416717 CCDC196A0A1B0GTZ2 297 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 FSD2A1L4K1 749 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 GOLGA6L4A6NEF3 574 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 CDK8P49336 464 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 R3HDM1Q15032 1099 aaKnown RBP12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 STRIP1Q5VSL9 837 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 CDC42EP5Q6NZY7 148 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 ZNF646O15015 1829 aaPredicted RBP12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 YDJCA8MPS7 323 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 WDHD1O75717 1129 aaPredicted RBP12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 RASA1P20936 1047 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 TROAPQ12815 778 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 GNL2Q13823 731 aaKnown RBP12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 TRIM29Q14134 588 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 CCDC93Q567U6 631 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 RCSD1Q6JBY9 416 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 CFAP45Q9UL16 551 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 KCNJ14Q9UNX9 436 aa12.4□□□□□ -0.42
SMPD4P1-201ENST00000416717 SNED1Q8TER0 1413 aa12.4□□□□□ -0.43
SMPD4P1-201ENST00000416717 ROBO3Q96MS0 1386 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 SLURP2P0DP57 97 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 KIF23Q02241 960 aaPredicted RBP12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 TCP10Q12799 353 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 NFIAQ12857 509 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 NID2Q14112 1375 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 RAD17O75943 681 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 C16orf86Q6ZW13 317 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 LARGE2Q8N3Y3 721 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 SUPT20HQ8NEM7 779 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 SYAP1Q96A49 352 aaPredicted RBP12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 PGBD1Q96JS3 809 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 ZNF396Q96N95 335 aaPredicted RBP12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 GRPEL1Q9HAV7 217 aa12.39□□□□□ -0.43
SMPD4P1-201ENST00000416717 KIF13BQ9NQT8 1826 aa12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 XRCC6P12956 609 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 LIG1P18858 919 aa12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 HHIPL2Q6UWX4 724 aa12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 ZFPM1Q8IX07 1006 aa12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 CTCFLQ8NI51 663 aaPredicted RBP12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 PANK2Q9BZ23 570 aa12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 V9GY48 417 aaPredicted RBP12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 ELP1O95163 1332 aa12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 STK36Q9NRP7 1315 aa12.38□□□□□ -0.43
SMPD4P1-201ENST00000416717 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 ZNF445P59923 1031 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 CCDC125Q86Z20 511 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 PNMA1Q8ND90 353 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 CLIC4Q9Y696 253 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 DDAH1O94760 285 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 DEXIO95424 95 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 CALM1P0DP23 149 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 CALM2P0DP24 149 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 CALM3P0DP25 149 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 POLD1P28340 1107 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 RCAN1P53805 252 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 RASGRP2Q7LDG7 609 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 RTKN2Q8IZC4 609 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 SRBD1Q8N5C6 995 aaKnown RBP12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 WASF1Q92558 559 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 ZDHHC15Q96MV8 337 aa12.37□□□□□ -0.43
SMPD4P1-201ENST00000416717 ZNF287Q9HBT7 754 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms