RNA–Protein interactions for RNA: ENST00000416242.2

LINC01388-201, Transcript of long intergenic non-protein coding RNA 1388, humanhuman

TSL 3 BASIC

Gene LINC01388, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01388-201ENST00000416242 DOCK1Q14185 1865 aa17.17■□□□□ 0.34
LINC01388-201ENST00000416242 CERKLQ49MI3 558 aaPredicted RBP17.17■□□□□ 0.34
LINC01388-201ENST00000416242 ANKRD45Q5TZF3 282 aa17.17■□□□□ 0.34
LINC01388-201ENST00000416242 SDR42E1Q8WUS8 393 aa17.17■□□□□ 0.34
LINC01388-201ENST00000416242 APPBP2Q92624 585 aa17.17■□□□□ 0.34
LINC01388-201ENST00000416242 CABP5Q9NP86 173 aa17.17■□□□□ 0.34
LINC01388-201ENST00000416242 CPA4Q9UI42 421 aa17.17■□□□□ 0.34
LINC01388-201ENST00000416242 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
LINC01388-201ENST00000416242 GDF11O95390 407 aa17.16■□□□□ 0.34
LINC01388-201ENST00000416242 GH2P01242 217 aa17.16■□□□□ 0.34
LINC01388-201ENST00000416242 CYP2C8P10632 490 aa17.16■□□□□ 0.34
LINC01388-201ENST00000416242 PLCD1P51178 756 aa17.16■□□□□ 0.34
LINC01388-201ENST00000416242 HMGCS2P54868 508 aa17.16■□□□□ 0.34
LINC01388-201ENST00000416242 MTMR2Q13614 643 aa17.16■□□□□ 0.34
LINC01388-201ENST00000416242 SLC4A8Q2Y0W8 1093 aa17.16■□□□□ 0.34
LINC01388-201ENST00000416242 CCDC84Q86UT8 332 aaPredicted RBP17.16■□□□□ 0.34
LINC01388-201ENST00000416242 PI4K2BQ8TCG2 481 aa17.16■□□□□ 0.34
LINC01388-201ENST00000416242 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.16■□□□□ 0.34
LINC01388-201ENST00000416242 RNF113AO15541 343 aaKnown RBP17.15■□□□□ 0.34
LINC01388-201ENST00000416242 BCRP11274 1271 aa17.15■□□□□ 0.34
LINC01388-201ENST00000416242 GNAT2P19087 354 aa17.15■□□□□ 0.34
LINC01388-201ENST00000416242 OSBPP22059 807 aa17.15■□□□□ 0.34
LINC01388-201ENST00000416242 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
LINC01388-201ENST00000416242 RGS19P49795 217 aa17.15■□□□□ 0.34
LINC01388-201ENST00000416242 ABCB5Q2M3G0 1257 aa17.15■□□□□ 0.34
LINC01388-201ENST00000416242 TSHZ3Q63HK5 1081 aa17.15■□□□□ 0.34
LINC01388-201ENST00000416242 GIMAP6Q6P9H5 292 aa17.15■□□□□ 0.34
LINC01388-201ENST00000416242 TICAM2Q86XR7 235 aa17.15■□□□□ 0.34
LINC01388-201ENST00000416242 ARPP21Q9UBL0 812 aaPredicted RBP17.15■□□□□ 0.34
LINC01388-201ENST00000416242 SLC4A4Q9Y6R1 1079 aa17.15■□□□□ 0.34
LINC01388-201ENST00000416242 SHMT1P34896 483 aa17.14■□□□□ 0.33
LINC01388-201ENST00000416242 USP14P54578 494 aa17.14■□□□□ 0.33
LINC01388-201ENST00000416242 FCGRTP55899 365 aa17.14■□□□□ 0.33
LINC01388-201ENST00000416242 GTF3C2Q8WUA4 911 aaPredicted RBP17.14■□□□□ 0.33
LINC01388-201ENST00000416242 PUS7LQ9H0K6 701 aaKnown RBP17.14■□□□□ 0.33
LINC01388-201ENST00000416242 FOCADQ5VW36 1801 aa17.14■□□□□ 0.33
LINC01388-201ENST00000416242 HOXA7P31268 230 aaPredicted RBP17.13■□□□□ 0.33
LINC01388-201ENST00000416242 PSMC4P43686 418 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 FAM110CQ1W6H9 321 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 TREML2Q5T2D2 321 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 USP17L2Q6R6M4 530 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 NBPF11Q86T75 865 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 SMC5Q8IY18 1101 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 ARMC5Q96C12 935 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 CCDC17Q96LX7 622 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 STRBPQ96SI9 672 aaKnown RBP17.13■□□□□ 0.33
LINC01388-201ENST00000416242 FEZ1Q99689 392 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 STAP2Q9UGK3 403 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 SALL3Q9BXA9 1300 aa17.13■□□□□ 0.33
LINC01388-201ENST00000416242 PRKAB2O43741 272 aa17.12■□□□□ 0.33
LINC01388-201ENST00000416242 FMNL1O95466 1100 aaPredicted RBP17.12■□□□□ 0.33
LINC01388-201ENST00000416242 IRX3P78415 501 aaPredicted RBP17.12■□□□□ 0.33
LINC01388-201ENST00000416242 JAG1P78504 1218 aa17.12■□□□□ 0.33
LINC01388-201ENST00000416242 RAB3GAP1Q15042 981 aa17.12■□□□□ 0.33
LINC01388-201ENST00000416242 SLFNL1Q499Z3 407 aa17.12■□□□□ 0.33
LINC01388-201ENST00000416242 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
LINC01388-201ENST00000416242 TMEM179Q6ZVK1 233 aa17.12■□□□□ 0.33
LINC01388-201ENST00000416242 OTUD7AQ8TE49 926 aaPredicted RBP17.12■□□□□ 0.33
LINC01388-201ENST00000416242 C12orf42Q96LP6 360 aa17.12■□□□□ 0.33
LINC01388-201ENST00000416242 KIAA1683Q9H0B3 1180 aa17.12■□□□□ 0.33
LINC01388-201ENST00000416242 SUPT16HQ9Y5B9 1047 aaKnown RBP17.12■□□□□ 0.33
LINC01388-201ENST00000416242 USP17L12C9JPN9 530 aa17.11■□□□□ 0.33
LINC01388-201ENST00000416242 USP17L21D6R901 530 aa17.11■□□□□ 0.33
LINC01388-201ENST00000416242 PDE1AP54750 535 aa17.11■□□□□ 0.33
LINC01388-201ENST00000416242 SLC9C1Q4G0N8 1177 aa17.11■□□□□ 0.33
LINC01388-201ENST00000416242 EXOC6Q8TAG9 804 aa17.11■□□□□ 0.33
LINC01388-201ENST00000416242 OSBP2Q969R2 916 aa17.11■□□□□ 0.33
LINC01388-201ENST00000416242 EVI5LQ96CN4 794 aa17.11■□□□□ 0.33
LINC01388-201ENST00000416242 ASCC2Q9H1I8 757 aaPredicted RBP17.11■□□□□ 0.33
LINC01388-201ENST00000416242 SRRDQ9UH36 339 aa17.11■□□□□ 0.33
LINC01388-201ENST00000416242 SIPA1L1O43166 1804 aa17.11■□□□□ 0.33
LINC01388-201ENST00000416242 MYO5AQ9Y4I1 1855 aaKnown RBP17.11■□□□□ 0.33
LINC01388-201ENST00000416242 DDX60LQ5H9U9 1706 aaKnown RBP17.1■□□□□ 0.33
LINC01388-201ENST00000416242 GPAA1O43292 621 aa17.1■□□□□ 0.33
LINC01388-201ENST00000416242 CAP1Q01518 475 aa17.1■□□□□ 0.33
LINC01388-201ENST00000416242 MLLT1Q03111 559 aaPredicted RBP17.1■□□□□ 0.33
LINC01388-201ENST00000416242 SBK1Q52WX2 424 aa17.1■□□□□ 0.33
LINC01388-201ENST00000416242 C16orf86Q6ZW13 317 aa17.1■□□□□ 0.33
LINC01388-201ENST00000416242 TRIM47Q96LD4 638 aa17.1■□□□□ 0.33
LINC01388-201ENST00000416242 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
LINC01388-201ENST00000416242 ARHGAP39Q9C0H5 1083 aa17.1■□□□□ 0.33
LINC01388-201ENST00000416242 ZNF287Q9HBT7 754 aa17.1■□□□□ 0.33
LINC01388-201ENST00000416242 PTCH2Q9Y6C5 1203 aa17.1■□□□□ 0.33
LINC01388-201ENST00000416242 MPHOSPH10O00566 681 aaKnown RBP17.09■□□□□ 0.33
LINC01388-201ENST00000416242 CHGBP05060 677 aa17.09■□□□□ 0.33
LINC01388-201ENST00000416242 CYP2D6P10635 497 aa17.09■□□□□ 0.33
LINC01388-201ENST00000416242 SHROOM1Q2M3G4 852 aaPredicted RBP17.09■□□□□ 0.33
LINC01388-201ENST00000416242 CTR9Q6PD62 1173 aa17.09■□□□□ 0.33
LINC01388-201ENST00000416242 ANKRD13CQ8N6S4 541 aa17.09■□□□□ 0.33
LINC01388-201ENST00000416242 SH2D4AQ9H788 454 aa17.09■□□□□ 0.33
LINC01388-201ENST00000416242 MYPNQ86TC9 1320 aa17.08■□□□□ 0.32
LINC01388-201ENST00000416242 TNPO2O14787 897 aaKnown RBP17.08■□□□□ 0.32
LINC01388-201ENST00000416242 SOX10P56693 466 aa17.08■□□□□ 0.32
LINC01388-201ENST00000416242 CHD1LQ86WJ1 897 aa17.08■□□□□ 0.32
LINC01388-201ENST00000416242 RAET1EQ8TD07 263 aa17.08■□□□□ 0.32
LINC01388-201ENST00000416242 LNPKQ9C0E8 428 aa17.08■□□□□ 0.32
LINC01388-201ENST00000416242 EMILIN3Q9NT22 766 aa17.08■□□□□ 0.32
LINC01388-201ENST00000416242 CDK5RAP2Q96SN8 1893 aa17.07■□□□□ 0.32
LINC01388-201ENST00000416242 ROBO3Q96MS0 1386 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms