RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 MARCH10Q8NA82 808 aaPredicted RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 SAAL1Q96ER3 474 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 PSMD1Q99460 953 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 NAPBQ9H115 298 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 SNAP23O00161 211 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 TRIM37O94972 964 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 PCCAP05165 728 aaPredicted RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 TOP1P11387 765 aaKnown RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 IL6STP40189 918 aaPredicted RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 PPFIA1Q13136 1202 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 USPL1Q5W0Q7 1092 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 NLRP10Q86W26 655 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 CCAR1Q8IX12 1150 aaKnown RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 DHX40Q8IX18 779 aaKnown RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 CCDC82Q8N4S0 544 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 MSANTD4Q8NCY6 345 aa8.84□□□□□ -0.99
SIK3-203ENST00000415541 BAG1Q99933 345 aaPredicted RBP8.84□□□□□ -0.99
SIK3-203ENST00000415541 ATXN2Q99700 1313 aaKnown RBP8.83□□□□□ -1
SIK3-203ENST00000415541 CTAGE15A4D2H0 777 aa8.83□□□□□ -1
SIK3-203ENST00000415541 ZNF213O14771 459 aa8.83□□□□□ -1
SIK3-203ENST00000415541 KIF5CO60282 957 aa8.83□□□□□ -1
SIK3-203ENST00000415541 SNUPNO95149 360 aaKnown RBP8.83□□□□□ -1
SIK3-203ENST00000415541 CTAGE8P0CG41 777 aa8.83□□□□□ -1
SIK3-203ENST00000415541 CTSWP56202 376 aa8.83□□□□□ -1
SIK3-203ENST00000415541 CTAGE6Q86UF2 777 aa8.83□□□□□ -1
SIK3-203ENST00000415541 CTAGE4Q8IX94 777 aa8.83□□□□□ -1
SIK3-203ENST00000415541 SERPINC1P01008 464 aa8.83□□□□□ -1
SIK3-203ENST00000415541 ADORA1P30542 326 aa8.83□□□□□ -1
SIK3-203ENST00000415541 PRPHP41219 470 aa8.83□□□□□ -1
SIK3-203ENST00000415541 GRIK3Q13003 919 aa8.83□□□□□ -1
SIK3-203ENST00000415541 SNCBQ16143 134 aa8.83□□□□□ -1
SIK3-203ENST00000415541 PARP10Q53GL7 1025 aa8.83□□□□□ -1
SIK3-203ENST00000415541 CREB3L3Q68CJ9 461 aa8.83□□□□□ -1
SIK3-203ENST00000415541 SEPT12Q8IYM1 358 aa8.83□□□□□ -1
SIK3-203ENST00000415541 CCDC26Q8TAB7 109 aa8.83□□□□□ -1
SIK3-203ENST00000415541 NUP133Q8WUM0 1156 aa8.83□□□□□ -1
SIK3-203ENST00000415541 NEK1Q96PY6 1258 aa8.83□□□□□ -1
SIK3-203ENST00000415541 SEC31BQ9NQW1 1179 aa8.83□□□□□ -1
SIK3-203ENST00000415541 KLC4Q9NSK0 619 aa8.83□□□□□ -1
SIK3-203ENST00000415541 CPDO75976 1380 aa8.83□□□□□ -1
SIK3-203ENST00000415541 FSBPO95073 299 aa8.83□□□□□ -1
SIK3-203ENST00000415541 CYP19A1P11511 503 aaPredicted RBP8.83□□□□□ -1
SIK3-203ENST00000415541 HSPA1LP34931 641 aa8.83□□□□□ -1
SIK3-203ENST00000415541 ZAP70P43403 619 aa8.83□□□□□ -1
SIK3-203ENST00000415541 SLC8A3P57103 927 aa8.83□□□□□ -1
SIK3-203ENST00000415541 GUCY1B3Q02153 619 aa8.83□□□□□ -1
SIK3-203ENST00000415541 PTH1RQ03431 593 aa8.83□□□□□ -1
SIK3-203ENST00000415541 ZNF513Q8N8E2 541 aaPredicted RBP8.83□□□□□ -1
SIK3-203ENST00000415541 MIGA1Q8NAN2 632 aa8.83□□□□□ -1
SIK3-203ENST00000415541 CCDC148Q8NFR7 591 aa8.83□□□□□ -1
SIK3-203ENST00000415541 BRF1Q92994 677 aa8.83□□□□□ -1
SIK3-203ENST00000415541 CAPS2Q9BXY5 557 aa8.83□□□□□ -1
SIK3-203ENST00000415541 STAP2Q9UGK3 403 aa8.83□□□□□ -1
SIK3-203ENST00000415541 SRP68Q9UHB9 627 aaKnown RBP8.83□□□□□ -1
SIK3-203ENST00000415541 A0A0D9SFI3 127 aa8.82□□□□□ -1
SIK3-203ENST00000415541 H7C1W4 665 aa8.82□□□□□ -1
SIK3-203ENST00000415541 TRIM29Q14134 588 aa8.82□□□□□ -1
SIK3-203ENST00000415541 DHX58Q96C10 678 aa8.82□□□□□ -1
SIK3-203ENST00000415541 CD248Q9HCU0 757 aa8.82□□□□□ -1
SIK3-203ENST00000415541 PUF60Q9UHX1 559 aaKnown RBP8.82□□□□□ -1
SIK3-203ENST00000415541 CDC23Q9UJX2 597 aa8.82□□□□□ -1
SIK3-203ENST00000415541 TRPC5Q9UL62 973 aaPredicted RBP8.82□□□□□ -1
SIK3-203ENST00000415541 FMN2Q9NZ56 1722 aa8.82□□□□□ -1
SIK3-203ENST00000415541 PALLDQ8WX93 1383 aa8.82□□□□□ -1
SIK3-203ENST00000415541 AFF2P51816 1311 aa8.82□□□□□ -1
SIK3-203ENST00000415541 GOLGA6CA6NDK9 693 aa8.82□□□□□ -1
SIK3-203ENST00000415541 CUTAO60888 179 aa8.82□□□□□ -1
SIK3-203ENST00000415541 GOLGA6DP0CG33 693 aa8.82□□□□□ -1
SIK3-203ENST00000415541 CDC37L1Q7L3B6 337 aa8.82□□□□□ -1
SIK3-203ENST00000415541 TCP11Q8WWU5 503 aa8.82□□□□□ -1
SIK3-203ENST00000415541 ZNF396Q96N95 335 aaPredicted RBP8.82□□□□□ -1
SIK3-203ENST00000415541 HOMER3Q9NSC5 361 aa8.82□□□□□ -1
SIK3-203ENST00000415541 GOLGA6AQ9NYA3 693 aa8.82□□□□□ -1
SIK3-203ENST00000415541 NDUFAB1O14561 156 aa8.82□□□□□ -1
SIK3-203ENST00000415541 UQCRFS1P1P0C7P4 283 aa8.82□□□□□ -1
SIK3-203ENST00000415541 TBC1D8BQ0IIM8 1120 aa8.82□□□□□ -1
SIK3-203ENST00000415541 WLSQ5T9L3 541 aa8.82□□□□□ -1
SIK3-203ENST00000415541 RNF187Q5TA31 235 aaPredicted RBP8.82□□□□□ -1
SIK3-203ENST00000415541 RCSD1Q6JBY9 416 aa8.82□□□□□ -1
SIK3-203ENST00000415541 PI16Q6UXB8 463 aa8.82□□□□□ -1
SIK3-203ENST00000415541 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
SIK3-203ENST00000415541 ZNF483Q8TF39 744 aaPredicted RBP8.82□□□□□ -1
SIK3-203ENST00000415541 ZNF526Q8TF50 670 aaPredicted RBP8.82□□□□□ -1
SIK3-203ENST00000415541 AOX1Q06278 1338 aa8.81□□□□□ -1
SIK3-203ENST00000415541 RNF113AO15541 343 aaKnown RBP8.81□□□□□ -1
SIK3-203ENST00000415541 RHOXF2BP0C7M4 288 aa8.81□□□□□ -1
SIK3-203ENST00000415541 MYBL2P10244 700 aa8.81□□□□□ -1
SIK3-203ENST00000415541 ATP5JP18859 108 aa8.81□□□□□ -1
SIK3-203ENST00000415541 IBSPP21815 317 aaPredicted RBP8.81□□□□□ -1
SIK3-203ENST00000415541 CYP7A1P22680 504 aa8.81□□□□□ -1
SIK3-203ENST00000415541 UBASH3AP57075 661 aa8.81□□□□□ -1
SIK3-203ENST00000415541 STIM1Q13586 685 aa8.81□□□□□ -1
SIK3-203ENST00000415541 PLCB4Q15147 1175 aa8.81□□□□□ -1
SIK3-203ENST00000415541 CFAP100Q494V2 611 aa8.81□□□□□ -1
SIK3-203ENST00000415541 SUSD4Q5VX71 490 aa8.81□□□□□ -1
SIK3-203ENST00000415541 FAM173BQ6P4H8 233 aa8.81□□□□□ -1
SIK3-203ENST00000415541 DZIP1Q86YF9 867 aaKnown RBP8.81□□□□□ -1
SIK3-203ENST00000415541 BPIFA3Q9BQP9 254 aa8.81□□□□□ -1
SIK3-203ENST00000415541 RHOXF2Q9BQY4 288 aa8.81□□□□□ -1
SIK3-203ENST00000415541 TM6SF1Q9BZW5 370 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms