RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 WDR18Q9BV38 432 aa24.36■■□□□ 1.49
CTTN-205ENST00000415461 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.36■■□□□ 1.492e-6■■□□□ 13.8
CTTN-205ENST00000415461 ARMT1Q9H993 441 aa24.36■■□□□ 1.49
CTTN-205ENST00000415461 LOC285556D6RIA3 1793 aa24.36■■□□□ 1.49
CTTN-205ENST00000415461 PLCD1P51178 756 aa24.35■■□□□ 1.49
CTTN-205ENST00000415461 EVX2Q03828 476 aa24.35■■□□□ 1.49
CTTN-205ENST00000415461 TATDN1Q6P1N9 297 aa24.35■■□□□ 1.49
CTTN-205ENST00000415461 TTC6Q86TZ1 520 aa24.35■■□□□ 1.49
CTTN-205ENST00000415461 NAV1Q8NEY1 1877 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 MYH1P12882 1939 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 MBD4O95243 580 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 FMNL1O95466 1100 aaPredicted RBP24.34■■□□□ 1.49
CTTN-205ENST00000415461 GNRH1P01148 92 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 GH2P01242 217 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 POLR3DP05423 398 aaPredicted RBP24.34■■□□□ 1.49
CTTN-205ENST00000415461 SLC9C1Q4G0N8 1177 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 SH3D19Q5HYK7 790 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 GINM1Q9NU53 330 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 MCM9Q9NXL9 1143 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 PNMA3Q9UL41 463 aa24.34■■□□□ 1.49
CTTN-205ENST00000415461 TNRC18O15417 2968 aaPredicted RBP24.33■■□□□ 1.49
CTTN-205ENST00000415461 OSBPP22059 807 aa24.33■■□□□ 1.49
CTTN-205ENST00000415461 BACE1P56817 501 aa24.33■■□□□ 1.49
CTTN-205ENST00000415461 GPATCH3Q96I76 525 aa24.33■■□□□ 1.49
CTTN-205ENST00000415461 ZNF333Q96JL9 665 aa24.33■■□□□ 1.49
CTTN-205ENST00000415461 DCP1AQ9NPI6 582 aaPredicted RBP24.33■■□□□ 1.49
CTTN-205ENST00000415461 SRRDQ9UH36 339 aa24.33■■□□□ 1.49
CTTN-205ENST00000415461 POTEFA5A3E0 1075 aa24.32■■□□□ 1.48
CTTN-205ENST00000415461 PRKAB2O43741 272 aa24.32■■□□□ 1.48
CTTN-205ENST00000415461 SHMT1P34896 483 aa24.32■■□□□ 1.48
CTTN-205ENST00000415461 UBE3CQ15386 1083 aa24.32■■□□□ 1.48
CTTN-205ENST00000415461 CYP2D6P10635 497 aa24.31■■□□□ 1.48
CTTN-205ENST00000415461 FCGRTP55899 365 aa24.31■■□□□ 1.48
CTTN-205ENST00000415461 ANKRD13CQ8N6S4 541 aa24.31■■□□□ 1.48
CTTN-205ENST00000415461 SH3TC2Q8TF17 1288 aa24.31■■□□□ 1.48
CTTN-205ENST00000415461 TMOD4Q9NZQ9 345 aa24.31■■□□□ 1.48
CTTN-205ENST00000415461 PRMT2P55345 433 aa24.3■■□□□ 1.48
CTTN-205ENST00000415461 GABPAQ06546 454 aa24.3■■□□□ 1.48
CTTN-205ENST00000415461 PABPC4Q13310 644 aaKnown RBP eCLIP24.3■■□□□ 1.48
CTTN-205ENST00000415461 CERKLQ49MI3 558 aaPredicted RBP24.3■■□□□ 1.48
CTTN-205ENST00000415461 ASCC2Q9H1I8 757 aaPredicted RBP24.3■■□□□ 1.48
CTTN-205ENST00000415461 MYPNQ86TC9 1320 aa24.3■■□□□ 1.48
CTTN-205ENST00000415461 USP17L10C9JJH3 530 aa24.29■■□□□ 1.48
CTTN-205ENST00000415461 MYCP01106 439 aaPredicted RBP24.29■■□□□ 1.48
CTTN-205ENST00000415461 PRKCZQ05513 592 aa24.29■■□□□ 1.48
CTTN-205ENST00000415461 RAB3GAP1Q15042 981 aa24.29■■□□□ 1.48
CTTN-205ENST00000415461 ZSCAN25Q6NSZ9 544 aa24.29■■□□□ 1.48
CTTN-205ENST00000415461 OTUD7AQ8TE49 926 aaPredicted RBP24.29■■□□□ 1.48
CTTN-205ENST00000415461 HOXD10P28358 340 aa24.28■■□□□ 1.48
CTTN-205ENST00000415461 ABCB5Q2M3G0 1257 aa24.28■■□□□ 1.48
CTTN-205ENST00000415461 NBPF11Q86T75 865 aa24.28■■□□□ 1.48
CTTN-205ENST00000415461 PUS7LQ9H0K6 701 aaKnown RBP24.28■■□□□ 1.48
CTTN-205ENST00000415461 C19orf81C9J6K1 198 aa24.27■■□□□ 1.48
CTTN-205ENST00000415461 FAM110CQ1W6H9 321 aa24.27■■□□□ 1.48
CTTN-205ENST00000415461 KBTBD3Q8NAB2 608 aa24.27■■□□□ 1.48
CTTN-205ENST00000415461 SLC44A5Q8NCS7 719 aa24.27■■□□□ 1.48
CTTN-205ENST00000415461 RAET1EQ8TD07 263 aa24.27■■□□□ 1.48
CTTN-205ENST00000415461 FEZ1Q99689 392 aa24.27■■□□□ 1.48
CTTN-205ENST00000415461 EMILIN3Q9NT22 766 aa24.27■■□□□ 1.48
CTTN-205ENST00000415461 ATP8A2Q9NTI2 1148 aa24.27■■□□□ 1.48
CTTN-205ENST00000415461 TNPO2O14787 897 aaKnown RBP24.26■■□□□ 1.47
CTTN-205ENST00000415461 IRX3P78415 501 aaPredicted RBP24.26■■□□□ 1.47
CTTN-205ENST00000415461 ZYXQ15942 572 aaKnown RBP24.26■■□□□ 1.47
CTTN-205ENST00000415461 GABRQQ9UN88 632 aa24.26■■□□□ 1.47
CTTN-205ENST00000415461 SLC4A4Q9Y6R1 1079 aa24.26■■□□□ 1.47
CTTN-205ENST00000415461 MKI67P46013 3256 aaKnown RBP24.25■■□□□ 1.47
CTTN-205ENST00000415461 CYP2D7A0A087X1C5 515 aa24.25■■□□□ 1.47
CTTN-205ENST00000415461 SMIM22K7EJ46 135 aa24.25■■□□□ 1.47
CTTN-205ENST00000415461 GUCY1A2P33402 732 aa24.25■■□□□ 1.47
CTTN-205ENST00000415461 GCLCP48506 637 aaPredicted RBP24.25■■□□□ 1.47
CTTN-205ENST00000415461 ACER1Q8TDN7 264 aa24.25■■□□□ 1.47
CTTN-205ENST00000415461 DYNLL2Q96FJ2 89 aa24.25■■□□□ 1.47
CTTN-205ENST00000415461 CABP5Q9NP86 173 aa24.25■■□□□ 1.47
CTTN-205ENST00000415461 TTC41PQ6P2S7 1318 aa24.25■■□□□ 1.47
CTTN-205ENST00000415461 HOXA7P31268 230 aaPredicted RBP24.24■■□□□ 1.47
CTTN-205ENST00000415461 USP17L2Q6R6M4 530 aa24.24■■□□□ 1.47
CTTN-205ENST00000415461 PI4K2BQ8TCG2 481 aa24.24■■□□□ 1.47
CTTN-205ENST00000415461 MYH7P12883 1935 aa24.23■■□□□ 1.47
CTTN-205ENST00000415461 MPHOSPH10O00566 681 aaKnown RBP24.23■■□□□ 1.47
CTTN-205ENST00000415461 PEX10O60683 326 aa24.23■■□□□ 1.47
CTTN-205ENST00000415461 EN2P19622 333 aaPredicted RBP24.23■■□□□ 1.47
CTTN-205ENST00000415461 GRK4P32298 578 aa24.23■■□□□ 1.47
CTTN-205ENST00000415461 SEPT2Q15019 361 aa24.23■■□□□ 1.47
CTTN-205ENST00000415461 P2RX7Q99572 595 aaKnown RBP24.23■■□□□ 1.47
CTTN-205ENST00000415461 TMEM106CQ9BVX2 250 aa24.23■■□□□ 1.47
CTTN-205ENST00000415461 SWAP70Q9UH65 585 aa24.23■■□□□ 1.47
CTTN-205ENST00000415461 RBBP6Q7Z6E9 1792 aaKnown RBP24.22■■□□□ 1.47
CTTN-205ENST00000415461 FLT3LGP49771 235 aa24.22■■□□□ 1.47
CTTN-205ENST00000415461 HERVK_113P62684 666 aa24.22■■□□□ 1.47
CTTN-205ENST00000415461 C12orf60Q5U649 245 aa24.22■■□□□ 1.47
CTTN-205ENST00000415461 OSBP2Q969R2 916 aa24.22■■□□□ 1.47
CTTN-205ENST00000415461 C12orf42Q96LP6 360 aa24.22■■□□□ 1.47
CTTN-205ENST00000415461 KIAA0100Q14667 2235 aaKnown RBP24.21■■□□□ 1.47
CTTN-205ENST00000415461 USP17L12C9JPN9 530 aa24.21■■□□□ 1.47
CTTN-205ENST00000415461 USP17L21D6R901 530 aa24.21■■□□□ 1.47
CTTN-205ENST00000415461 ERC2O15083 957 aa24.21■■□□□ 1.47
CTTN-205ENST00000415461 RNF113AO15541 343 aaKnown RBP24.21■■□□□ 1.47
CTTN-205ENST00000415461 MX1P20591 662 aa24.21■■□□□ 1.47
CTTN-205ENST00000415461 HDAC1Q13547 482 aaPredicted RBP24.21■■□□□ 1.47
CTTN-205ENST00000415461 MTFR1Q15390 333 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms