RNA–Protein interactions for RNA: ENST00000415452.5

RUBCN-204, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 1 (best)

Gene RUBCN, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-204ENST00000415452 CATIPQ7Z7H3 387 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 PROM2Q8N271 834 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 GGA1Q9UJY5 639 aa13.17□□□□□ -0.3
RUBCN-204ENST00000415452 KLRG2A4D1S0 409 aaPredicted RBP13.16□□□□□ -0.3
RUBCN-204ENST00000415452 UFL1O94874 794 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 CALM1P0DP23 149 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 CALM2P0DP24 149 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 CALM3P0DP25 149 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 SAFBQ15424 915 aaKnown RBP eCLIP13.16□□□□□ -0.3
RUBCN-204ENST00000415452 FMR1NBQ8N0W7 255 aaPredicted RBP13.16□□□□□ -0.3
RUBCN-204ENST00000415452 UBE2Q2LH0YL09 131 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 BAG3O95817 575 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 MMP1P03956 469 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 LDHCP07864 332 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 GUCY1A2P33402 732 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 NT5C2P49902 561 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 PDE4BQ07343 736 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 RNF26Q9BY78 433 aaPredicted RBP13.16□□□□□ -0.3
RUBCN-204ENST00000415452 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 MYH6P13533 1939 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
RUBCN-204ENST00000415452 IL1R1P14778 569 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 PPP4CP60510 307 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 JMYQ8N9B5 988 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
RUBCN-204ENST00000415452 RBM28Q9NW13 759 aaKnown RBP13.16□□□□□ -0.3
RUBCN-204ENST00000415452 MCM9Q9NXL9 1143 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 FAM13BQ9NYF5 915 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
RUBCN-204ENST00000415452 A0A1B0GVL5 298 aa13.15□□□□□ -0.3
RUBCN-204ENST00000415452 PPP6R2O75170 966 aa13.15□□□□□ -0.3
RUBCN-204ENST00000415452 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
RUBCN-204ENST00000415452 CMTR1Q8N1G2 835 aaKnown RBP13.15□□□□□ -0.3
RUBCN-204ENST00000415452 CCDC82Q8N4S0 544 aa13.15□□□□□ -0.3
RUBCN-204ENST00000415452 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
RUBCN-204ENST00000415452 CBX8Q9HC52 389 aa13.15□□□□□ -0.3
RUBCN-204ENST00000415452 DDAH1O94760 285 aa13.15□□□□□ -0.31
RUBCN-204ENST00000415452 CYP2D6P10635 497 aa13.15□□□□□ -0.31
RUBCN-204ENST00000415452 CMA1P23946 247 aa13.15□□□□□ -0.31
RUBCN-204ENST00000415452 USP5P45974 858 aa13.15□□□□□ -0.31
RUBCN-204ENST00000415452 NDUFA8P51970 172 aa13.15□□□□□ -0.31
RUBCN-204ENST00000415452 AKAP17AQ02040 695 aaKnown RBP13.15□□□□□ -0.31
RUBCN-204ENST00000415452 AXDND1Q5T1B0 1012 aaPredicted RBP13.15□□□□□ -0.31
RUBCN-204ENST00000415452 CERS3Q8IU89 383 aa13.15□□□□□ -0.31
RUBCN-204ENST00000415452 NOSTRINQ8IVI9 506 aa13.15□□□□□ -0.31
RUBCN-204ENST00000415452 FOXP1Q9H334 677 aaPredicted RBP13.15□□□□□ -0.31
RUBCN-204ENST00000415452 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.31
RUBCN-204ENST00000415452 ZKSCAN5Q9Y2L8 839 aa13.15□□□□□ -0.31
RUBCN-204ENST00000415452 TROAPQ12815 778 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 PTPAQ15257 358 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 DIS3L2Q8IYB7 885 aaKnown RBP13.14□□□□□ -0.31
RUBCN-204ENST00000415452 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 PLSCR1O15162 318 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 ZNF165P49910 485 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 PLCB2Q00722 1185 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 EVX2Q03828 476 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 GRIK5Q16478 980 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 STX1AQ16623 288 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 C12orf60Q5U649 245 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 LUZP1Q86V48 1076 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 SH3RF3Q8TEJ3 882 aaPredicted RBP13.14□□□□□ -0.31
RUBCN-204ENST00000415452 DNAJC25Q9H1X3 360 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 MROH7-TTC4A0A0A0MT08 1334 aa13.14□□□□□ -0.31
RUBCN-204ENST00000415452 BTBD18B2RXH4 712 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
RUBCN-204ENST00000415452 USP17L8P0C7I0 530 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 XBP1P17861 261 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 IRX3P78415 501 aaPredicted RBP13.13□□□□□ -0.31
RUBCN-204ENST00000415452 DIXDC1Q155Q3 683 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 AMOTL1Q8IY63 956 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 NLGN1Q8N2Q7 840 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 SDF4Q9BRK5 362 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
RUBCN-204ENST00000415452 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
RUBCN-204ENST00000415452 KCNJ14Q9UNX9 436 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 TSPY2A6NKD2 308 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 LRRC37AA6NMS7 1700 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 AP5Z1O43299 807 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
RUBCN-204ENST00000415452 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
RUBCN-204ENST00000415452 FUT2Q10981 343 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 FAM47AQ5JRC9 791 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 SP8Q8IXZ3 490 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 POLLQ9UGP5 575 aa13.13□□□□□ -0.31
RUBCN-204ENST00000415452 ZSCAN20P17040 1043 aaPredicted RBP13.12□□□□□ -0.31
RUBCN-204ENST00000415452 RILPL1Q5EBL4 403 aa13.12□□□□□ -0.31
RUBCN-204ENST00000415452 ROBO3Q96MS0 1386 aa13.12□□□□□ -0.31
RUBCN-204ENST00000415452 ZNF202O95125 648 aa13.12□□□□□ -0.31
RUBCN-204ENST00000415452 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
RUBCN-204ENST00000415452 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
RUBCN-204ENST00000415452 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
RUBCN-204ENST00000415452 ANO10Q9NW15 660 aa13.12□□□□□ -0.31
RUBCN-204ENST00000415452 NAV1Q8NEY1 1877 aa13.12□□□□□ -0.31
RUBCN-204ENST00000415452 LTBP1Q14766 1721 aa13.12□□□□□ -0.31
RUBCN-204ENST00000415452 ANKRD31Q8N7Z5 1873 aa13.11□□□□□ -0.31
RUBCN-204ENST00000415452 C6orf229H3BNL8 230 aa13.11□□□□□ -0.31
RUBCN-204ENST00000415452 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
RUBCN-204ENST00000415452 NMT2O60551 498 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms