RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 SUGT1Q9Y2Z0 365 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 KIF3AQ9Y496 699 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 MYH3P11055 1940 aa7.8□□□□□ -1.16
HDAC8-211ENST00000415409 TNRC6CQ9HCJ0 1690 aaKnown RBP7.79□□□□□ -1.16
HDAC8-211ENST00000415409 FAM205AQ6ZU69 1335 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 MINDY4BA8MYZ0 360 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 NRG2O14511 850 aaPredicted RBP7.79□□□□□ -1.16
HDAC8-211ENST00000415409 DHX16O60231 1041 aaKnown RBP7.79□□□□□ -1.16
HDAC8-211ENST00000415409 YY1P25490 414 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 POLD1P28340 1107 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 CHRNA5P30532 468 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 GTF2IP78347 998 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 CTDSPL2Q05D32 466 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 PPARAQ07869 468 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 APOBRQ0VD83 1088 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 COL9A3Q14050 684 aaPredicted RBP7.79□□□□□ -1.16
HDAC8-211ENST00000415409 KMT5BQ4FZB7 885 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 MFSD14BQ5SR56 506 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 TRAF7Q6Q0C0 670 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 CHST3Q7LGC8 479 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 ZNF384Q8TF68 577 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 SDR42E1Q8WUS8 393 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 ANAPC4Q9UJX5 808 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 ANGEL1Q9UNK9 670 aaKnown RBP7.79□□□□□ -1.16
HDAC8-211ENST00000415409 ATP6V1DQ9Y5K8 247 aa7.79□□□□□ -1.16
HDAC8-211ENST00000415409 ARAP2Q8WZ64 1704 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 KLF18A0A0U1RQI7 1052 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 ERICH2A1L162 156 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 B4E1Z4 1266 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 IFIT3O14879 490 aaKnown RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 STX6O43752 255 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 BAG4O95429 457 aaKnown RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 ZSCAN22P10073 491 aaPredicted RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 SYT1P21579 422 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 PDIA3P30101 505 aaKnown RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 USP5P45974 858 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 NT5C2P49902 561 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 EVCP57679 992 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 ANTXR2P58335 489 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 HMGN5P82970 282 aaKnown RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 PKP1Q13835 747 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 SKOR2Q2VWA4 1001 aaPredicted RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 TMEM67Q5HYA8 995 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 RRP12Q5JTH9 1297 aaKnown RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 LARP1BQ659C4 914 aaKnown RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 CTR9Q6PD62 1173 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 BLOC1S3Q6QNY0 202 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 SYNE3Q6ZMZ3 975 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 NFXL1Q6ZNB6 911 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 PODNQ7Z5L7 613 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 TMTC2Q8N394 836 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 TTLL6Q8N841 843 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 FAM184AQ8NB25 1140 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 ESR2Q92731 530 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 MTA3Q9BTC8 594 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 RTFDC1Q9BY42 306 aaPredicted RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 MTFR1LQ9H019 292 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 ARPP21Q9UBL0 812 aaPredicted RBP7.78□□□□□ -1.16
HDAC8-211ENST00000415409 ZDHHC9Q9Y397 364 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 MROH7-TTC4A0A0A0MT08 1334 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 NEDD4P46934 1319 aa7.78□□□□□ -1.16
HDAC8-211ENST00000415409 GPR75-ASB3A0A0A6YYF3 556 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 CCDC69A6NI79 296 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 GOLGA8BA8MQT2 603 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 USP17L12C9JPN9 530 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 USP17L21D6R901 530 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 SH2B2O14492 632 aaPredicted RBP7.77□□□□□ -1.17
HDAC8-211ENST00000415409 CPLX1O14810 134 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 KDM4AO75164 1064 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 BTDP43251 543 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 PDE4BQ07343 736 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 ST3GAL1Q11201 340 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 SCRN1Q12765 414 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 DIXDC1Q155Q3 683 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 SBK1Q52WX2 424 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 CCDC93Q567U6 631 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 FOXD4L5Q5VV16 416 aaPredicted RBP7.77□□□□□ -1.17
HDAC8-211ENST00000415409 CPLX2Q6PUV4 134 aaKnown RBP7.77□□□□□ -1.17
HDAC8-211ENST00000415409 OLFM4Q6UX06 510 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 CYB5R4Q7L1T6 521 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 RTKN2Q8IZC4 609 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 FOXD4L4Q8WXT5 416 aaPredicted RBP7.77□□□□□ -1.17
HDAC8-211ENST00000415409 UBAC1Q9BSL1 405 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 TMEM134Q9H6X4 195 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 DCP1AQ9NPI6 582 aaPredicted RBP7.77□□□□□ -1.17
HDAC8-211ENST00000415409 ADGRG1Q9Y653 693 aa7.77□□□□□ -1.17
HDAC8-211ENST00000415409 PTPDC1A2A3K4 754 aa7.76□□□□□ -1.17
HDAC8-211ENST00000415409 VPS37CA5D8V6 355 aaPredicted RBP7.76□□□□□ -1.17
HDAC8-211ENST00000415409 RCCD1A6NED2 376 aa7.76□□□□□ -1.17
HDAC8-211ENST00000415409 H3BQV1 296 aa7.76□□□□□ -1.17
HDAC8-211ENST00000415409 ORC4O43929 436 aa7.76□□□□□ -1.17
HDAC8-211ENST00000415409 TRAK2O60296 914 aa7.76□□□□□ -1.17
HDAC8-211ENST00000415409 CDKL5O76039 1030 aa7.76□□□□□ -1.17
HDAC8-211ENST00000415409 LIFRP42702 1097 aa7.76□□□□□ -1.17
HDAC8-211ENST00000415409 METAP2P50579 478 aaKnown RBP eCLIP7.76□□□□□ -1.17
HDAC8-211ENST00000415409 TGFB2P61812 414 aa7.76□□□□□ -1.17
HDAC8-211ENST00000415409 FKBP1AP62942 108 aaKnown RBP7.76□□□□□ -1.17
HDAC8-211ENST00000415409 CCT2P78371 535 aaKnown RBP7.76□□□□□ -1.17
HDAC8-211ENST00000415409 GRIK5Q16478 980 aa7.76□□□□□ -1.17
HDAC8-211ENST00000415409 SOGA3Q5TF21 947 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms