RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 DTNBO60941 627 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 HLA-DOAP06340 250 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 RASA3Q14644 834 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 PI4KBQ9UBF8 816 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 LIMCH1Q9UPQ0 1083 aa18.25■□□□□ 0.51
SHMT2-202ENST00000414700 SHMT1P34896 483 aa18.24■□□□□ 0.51
SHMT2-202ENST00000414700 FAM83AQ86UY5 434 aa18.24■□□□□ 0.51
SHMT2-202ENST00000414700 ADARB2Q9NS39 739 aaKnown RBP18.24■□□□□ 0.51
SHMT2-202ENST00000414700 FOXD4L1Q9NU39 408 aa18.24■□□□□ 0.51
SHMT2-202ENST00000414700 GGA3Q9NZ52 723 aa18.24■□□□□ 0.51
SHMT2-202ENST00000414700 PGAP2Q9UHJ9 254 aa18.24■□□□□ 0.51
SHMT2-202ENST00000414700 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 SH2B2O14492 632 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-202ENST00000414700 MCM4P33991 863 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 MCM2P49736 904 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 MRE11P49959 708 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 TFAP4Q01664 338 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 PANK2Q9BZ23 570 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 EHD4Q9H223 541 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 LY9Q9HBG7 655 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 COL2A1P02458 1487 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-202ENST00000414700 WDR19Q8NEZ3 1342 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 POTECB2RU33 542 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 IFIT3O14879 490 aaKnown RBP18.23■□□□□ 0.51
SHMT2-202ENST00000414700 SHROOM1Q2M3G4 852 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-202ENST00000414700 TMEM67Q5HYA8 995 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 FBXL16Q8N461 479 aa18.23■□□□□ 0.51
SHMT2-202ENST00000414700 CRACR2BQ8N4Y2 399 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-202ENST00000414700 ANGEL1Q9UNK9 670 aaKnown RBP18.23■□□□□ 0.51
SHMT2-202ENST00000414700 TNKSO95271 1327 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 ST3GAL1Q11201 340 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 STK3Q13188 491 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 RAB11FIP4Q86YS3 637 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 ZNF444Q8N0Y2 327 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-202ENST00000414700 ENAHQ8N8S7 591 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-202ENST00000414700 NECAB1Q8N987 351 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 TEPSINQ96N21 525 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 DEFB129Q9H1M3 183 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 IL17RBQ9NRM6 502 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 ANKRD1Q15327 319 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 SEC23AQ15436 765 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 PRAMEF18Q5VWM3 479 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 TMEM87BQ96K49 555 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 UBAC1Q9BSL1 405 aa18.22■□□□□ 0.51
SHMT2-202ENST00000414700 SCN4AP35499 1836 aa18.21■□□□□ 0.51
SHMT2-202ENST00000414700 TSPY3P0CV98 308 aa18.21■□□□□ 0.51
SHMT2-202ENST00000414700 TSPY8P0CW00 308 aa18.21■□□□□ 0.51
SHMT2-202ENST00000414700 DLK2Q6UY11 383 aa18.21■□□□□ 0.51
SHMT2-202ENST00000414700 MIGA2Q7L4E1 593 aa18.21■□□□□ 0.51
SHMT2-202ENST00000414700 METTL16Q86W50 562 aaKnown RBP18.21■□□□□ 0.51
SHMT2-202ENST00000414700 ZSCAN10Q96SZ4 725 aaPredicted RBP18.21■□□□□ 0.51
SHMT2-202ENST00000414700 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
SHMT2-202ENST00000414700 AKR1B1P15121 316 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 EPHX2P34913 555 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 TNNI2P48788 182 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 TNFAIP1Q13829 316 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 RRP1BQ14684 758 aaKnown RBP18.2■□□□□ 0.5
SHMT2-202ENST00000414700 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
SHMT2-202ENST00000414700 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.2■□□□□ 0.55e-8■■■□□ 18.8
SHMT2-202ENST00000414700 ZNF287Q9HBT7 754 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 SWAP70Q9UH65 585 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 NAP1L2Q9ULW6 460 aaPredicted RBP18.2■□□□□ 0.5
SHMT2-202ENST00000414700 KLF18A0A0U1RQI7 1052 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 RXRAP19793 462 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 IQCA1Q86XH1 822 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 CLEC10AQ8IUN9 316 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 WDR90Q96KV7 1748 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 MYL10Q9BUA6 226 aa18.2■□□□□ 0.5
SHMT2-202ENST00000414700 WTAPQ15007 396 aa18.19■□□□□ 0.5
SHMT2-202ENST00000414700 SART3Q15020 963 aaKnown RBP18.19■□□□□ 0.5
SHMT2-202ENST00000414700 RCSD1Q6JBY9 416 aa18.19■□□□□ 0.5
SHMT2-202ENST00000414700 TATDN1Q6P1N9 297 aa18.19■□□□□ 0.5
SHMT2-202ENST00000414700 CCDC83Q8IWF9 413 aa18.19■□□□□ 0.5
SHMT2-202ENST00000414700 PDIA3P30101 505 aaKnown RBP18.18■□□□□ 0.5
SHMT2-202ENST00000414700 LIFRP42702 1097 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 EVCP57679 992 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 JAG1P78504 1218 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 TAF1DQ9H5J8 278 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-202ENST00000414700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.18■□□□□ 0.5
SHMT2-202ENST00000414700 HPS5Q9UPZ3 1129 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 GREB1LQ9C091 1923 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-202ENST00000414700 ERICH2A1L162 156 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 GDF11O95390 407 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 CCT2P78371 535 aaKnown RBP18.18■□□□□ 0.5
SHMT2-202ENST00000414700 CUL4AQ13619 759 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 NBPF12Q5TAG4 269 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-202ENST00000414700 APOA5Q6Q788 366 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 SGMS1Q86VZ5 419 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 APOBEC3FQ8IUX4 373 aaKnown RBP18.18■□□□□ 0.5
SHMT2-202ENST00000414700 NEDD1Q8NHV4 660 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 TRIM34Q9BYJ4 488 aa18.18■□□□□ 0.5
SHMT2-202ENST00000414700 NCOA5Q9HCD5 579 aaKnown RBP18.18■□□□□ 0.5
SHMT2-202ENST00000414700 ESPNB1AK53 854 aa18.17■□□□□ 0.5
SHMT2-202ENST00000414700 SCRN1Q12765 414 aa18.17■□□□□ 0.5
SHMT2-202ENST00000414700 CEP95Q96GE4 821 aa18.17■□□□□ 0.5
SHMT2-202ENST00000414700 ZSCAN31Q96LW9 406 aaPredicted RBP18.17■□□□□ 0.5
SHMT2-202ENST00000414700 SH2B1Q9NRF2 756 aaPredicted RBP18.17■□□□□ 0.5
SHMT2-202ENST00000414700 HERC5Q9UII4 1024 aaKnown RBP18.17■□□□□ 0.5
SHMT2-202ENST00000414700 FZD1Q9UP38 647 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms