RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 NR2E3Q9Y5X4 410 aa20.31■□□□□ 0.84
SF1-207ENST00000413951 USP17L10C9JJH3 530 aa20.3■□□□□ 0.84
SF1-207ENST00000413951 IDH1O75874 414 aaKnown RBP20.3■□□□□ 0.84
SF1-207ENST00000413951 INHAP05111 366 aa20.3■□□□□ 0.84
SF1-207ENST00000413951 CYP7A1P22680 504 aa20.3■□□□□ 0.84
SF1-207ENST00000413951 ASCC2Q9H1I8 757 aaPredicted RBP20.3■□□□□ 0.84
SF1-207ENST00000413951 TAOK2Q9UL54 1235 aa20.3■□□□□ 0.84
SF1-207ENST00000413951 MAST2Q6P0Q8 1798 aa20.29■□□□□ 0.84
SF1-207ENST00000413951 FARP2O94887 1054 aaPredicted RBP20.29■□□□□ 0.84
SF1-207ENST00000413951 HOXA7P31268 230 aaPredicted RBP20.29■□□□□ 0.84
SF1-207ENST00000413951 MTMR2Q13614 643 aa20.29■□□□□ 0.84
SF1-207ENST00000413951 EAF2Q96CJ1 260 aaPredicted RBP20.29■□□□□ 0.84
SF1-207ENST00000413951 CCDC8Q9H0W5 538 aaPredicted RBP20.29■□□□□ 0.84
SF1-207ENST00000413951 UNC93B1Q9H1C4 597 aa20.29■□□□□ 0.84
SF1-207ENST00000413951 PHIPQ8WWQ0 1821 aa20.29■□□□□ 0.84
SF1-207ENST00000413951 PTPRFP10586 1907 aa20.28■□□□□ 0.84
SF1-207ENST00000413951 H0YGN5 161 aa20.28■□□□□ 0.84
SF1-207ENST00000413951 TFRCP02786 760 aaKnown RBP20.28■□□□□ 0.84
SF1-207ENST00000413951 ELNP15502 786 aa20.28■□□□□ 0.84
SF1-207ENST00000413951 USP5P45974 858 aa20.28■□□□□ 0.84
SF1-207ENST00000413951 HDAC1Q13547 482 aaPredicted RBP20.28■□□□□ 0.84
SF1-207ENST00000413951 TTF1Q15361 905 aaPredicted RBP20.28■□□□□ 0.84
SF1-207ENST00000413951 UBE2Q1Q7Z7E8 422 aa20.28■□□□□ 0.84
SF1-207ENST00000413951 TTC6Q86TZ1 520 aa20.28■□□□□ 0.84
SF1-207ENST00000413951 PIH1D3Q9NQM4 214 aaKnown RBP20.28■□□□□ 0.84
SF1-207ENST00000413951 MORF4L1Q9UBU8 362 aa20.28■□□□□ 0.84
SF1-207ENST00000413951 PALD1Q9ULE6 856 aa20.28■□□□□ 0.84
SF1-207ENST00000413951 MGAMO43451 1857 aa20.27■□□□□ 0.84
SF1-207ENST00000413951 ADGRA1Q86SQ6 560 aa20.27■□□□□ 0.84
SF1-207ENST00000413951 COLQQ9Y215 455 aaPredicted RBP20.27■□□□□ 0.84
SF1-207ENST00000413951 HMGCRP04035 888 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 RRP1BQ14684 758 aaKnown RBP20.26■□□□□ 0.83
SF1-207ENST00000413951 AACSQ86V21 672 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 CCAR1Q8IX12 1150 aaKnown RBP20.26■□□□□ 0.83
SF1-207ENST00000413951 TRMT44Q8IYL2 757 aaKnown RBP20.26■□□□□ 0.83
SF1-207ENST00000413951 MAGEB6Q8N7X4 407 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 GPRC5AQ8NFJ5 357 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 SOCS4Q8WXH5 440 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 DEFB118Q96PH6 123 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 EHD4Q9H223 541 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 DCTPP1Q9H773 170 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 PAK6Q9NQU5 681 aaPredicted RBP20.26■□□□□ 0.83
SF1-207ENST00000413951 ZBTB21Q9ULJ3 1066 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 EXOC6BQ9Y2D4 811 aa20.26■□□□□ 0.83
SF1-207ENST00000413951 USP17L2Q6R6M4 530 aa20.25■□□□□ 0.83
SF1-207ENST00000413951 CLASRPQ8N2M8 674 aaKnown RBP20.25■□□□□ 0.83
SF1-207ENST00000413951 ANKLE1Q8NAG6 615 aa20.25■□□□□ 0.83
SF1-207ENST00000413951 SAP30BPQ9UHR5 308 aaKnown RBP20.25■□□□□ 0.83
SF1-207ENST00000413951 SERPINB13Q9UIV8 391 aa20.25■□□□□ 0.83
SF1-207ENST00000413951 LOC285556D6RIA3 1793 aa20.25■□□□□ 0.83
SF1-207ENST00000413951 MAPK4P31152 587 aa20.24■□□□□ 0.83
SF1-207ENST00000413951 USP14P54578 494 aa20.24■□□□□ 0.83
SF1-207ENST00000413951 DNAJC18Q9H819 358 aa20.24■□□□□ 0.83
SF1-207ENST00000413951 HMX1Q9NP08 348 aaPredicted RBP20.24■□□□□ 0.83
SF1-207ENST00000413951 TLR7Q9NYK1 1049 aaKnown RBP20.24■□□□□ 0.83
SF1-207ENST00000413951 RPTORQ8N122 1335 aa20.24■□□□□ 0.83
SF1-207ENST00000413951 RAB11FIP3O75154 756 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 GDF11O95390 407 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 HERVK_113P62684 666 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 DYNLL1P63167 89 aaKnown RBP20.23■□□□□ 0.83
SF1-207ENST00000413951 TATDN1Q6P1N9 297 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 MIGA1Q8NAN2 632 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 P2RX7Q99572 595 aaKnown RBP20.23■□□□□ 0.83
SF1-207ENST00000413951 NUDT12Q9BQG2 462 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 CRISPLD2Q9H0B8 497 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.23■□□□□ 0.837e-7■■■■■ 40.1
SF1-207ENST00000413951 CABP5Q9NP86 173 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 GJD2Q9UKL4 321 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 ATAD5Q96QE3 1844 aa20.23■□□□□ 0.83
SF1-207ENST00000413951 XRCC5P13010 732 aaKnown RBP20.22■□□□□ 0.83
SF1-207ENST00000413951 FXR1P51114 621 aaKnown RBP eCLIP20.22■□□□□ 0.83
SF1-207ENST00000413951 NECAB2Q7Z6G3 386 aa20.22■□□□□ 0.83
SF1-207ENST00000413951 RHPN1Q8TCX5 695 aa20.22■□□□□ 0.83
SF1-207ENST00000413951 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.22■□□□□ 0.83
SF1-207ENST00000413951 KIF1BPQ96EK5 621 aa20.22■□□□□ 0.83
SF1-207ENST00000413951 FEZ1Q99689 392 aa20.22■□□□□ 0.83
SF1-207ENST00000413951 EVI5O60447 810 aa20.21■□□□□ 0.83
SF1-207ENST00000413951 GLRX3O76003 335 aaKnown RBP20.21■□□□□ 0.83
SF1-207ENST00000413951 GH2P01242 217 aa20.21■□□□□ 0.83
SF1-207ENST00000413951 CCNA1P78396 465 aa20.21■□□□□ 0.83
SF1-207ENST00000413951 CERKLQ49MI3 558 aaPredicted RBP20.21■□□□□ 0.83
SF1-207ENST00000413951 CHRDL2Q6WN34 429 aa20.21■□□□□ 0.83
SF1-207ENST00000413951 C12orf42Q96LP6 360 aa20.21■□□□□ 0.83
SF1-207ENST00000413951 CWC22Q9HCG8 908 aaKnown RBP20.21■□□□□ 0.83
SF1-207ENST00000413951 MAGEB6P1A0A0J9YX57 407 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 USP17L15C9J2P7 530 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 USP17L13C9JLJ4 530 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 USP17L11C9JVI0 530 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 USP17L18D6R9N7 530 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 USP17L22D6RA61 530 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 USP17L17D6RBQ6 530 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 USP17L19D6RCP7 530 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 USP17L20D6RJB6 530 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 POLR3DP05423 398 aaPredicted RBP20.2■□□□□ 0.82
SF1-207ENST00000413951 IFIT2P09913 472 aaKnown RBP20.2■□□□□ 0.82
SF1-207ENST00000413951 USP17L24Q0WX57 530 aa20.2■□□□□ 0.82
SF1-207ENST00000413951 CRNKL1Q9BZJ0 848 aaKnown RBP20.2■□□□□ 0.82
SF1-207ENST00000413951 ERVK-9P63128 1117 aa20.19■□□□□ 0.82
SF1-207ENST00000413951 ERVK-24P63145 666 aa20.19■□□□□ 0.82
SF1-207ENST00000413951 ABCB5Q2M3G0 1257 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms