RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FOXQ1Q9C009 403 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 ZNRF3Q9ULT6 936 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 EFR3BQ9Y2G0 817 aa6.18□□□□□ -1.42
HMGB1P11-201ENST00000413899 IGLV1-40P01703 118 aa6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 MLECQ14165 292 aa6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 LRRFIP1Q32MZ4 808 aaKnown RBP6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 GK5Q6ZS86 529 aa6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 SLFN12Q8IYM2 578 aa6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 MFSD2AQ8NA29 543 aa6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 RBBP8NLQ8NC74 664 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 GIMAP7Q8NHV1 300 aa6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 GMIPQ9P107 970 aa6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 STRIP2Q9ULQ0 834 aa6.17□□□□□ -1.42
HMGB1P11-201ENST00000413899 DNAJA2O60884 412 aa6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 FURINP09958 794 aa6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 ADMP35318 185 aa6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 NASPP49321 788 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 YARSP54577 528 aaKnown RBP6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 CDK5R2Q13319 367 aa6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 CPSF6Q16630 551 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 NAALADL2Q58DX5 795 aa6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 PRAMEF13Q5VWM6 474 aa6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 OGFOD3Q6PK18 319 aa6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 LGR6Q9HBX8 967 aa6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 PRDM10Q9NQV6 1147 aa6.16□□□□□ -1.42
HMGB1P11-201ENST00000413899 SLC22A31A6NKX4 558 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 CYP27A1Q02318 531 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 ARID5AQ03989 594 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 CDCP2Q5VXM1 449 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 FAM13CQ8NE31 585 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 TMEM40Q8WWA1 233 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 TBC1D32Q96NH3 1257 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 FERD3LQ96RJ6 166 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 DUSP23Q9BVJ7 150 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 PPT2Q9UMR5 302 aa6.15□□□□□ -1.42
HMGB1P11-201ENST00000413899 SLITRK5O94991 958 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 F13BP05160 661 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 FGRP09769 529 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 OVOS1Q6IE37 1185 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 FAM214BQ7L5A3 538 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 TAB3Q8N5C8 712 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 OR6P1Q8NGX9 317 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 CYB5D2Q8WUJ1 264 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 ATG4CQ96DT6 458 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 MFSD14AQ96MC6 490 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 METTL22Q9BUU2 404 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 SRRTQ9BXP5 876 aaKnown RBP6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 SEMA6BQ9H3T3 888 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 CNNM2Q9H8M5 875 aa6.14□□□□□ -1.43
HMGB1P11-201ENST00000413899 UPK3BL1B0FP48 263 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 CHURC1-FNTBB4DL54 471 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 UPK3BL2E5RIL1 263 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 FAM87AP0C7U9 286 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 GIPRP48546 466 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 CYP27C1Q4G0S4 372 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 PRSS36Q5K4E3 855 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 ZDHHC13Q8IUH4 622 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 SHISA5Q8N114 240 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 TOP6BLQ8N6T0 577 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 SHKBP1Q8TBC3 707 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 SHDQ96IW2 340 aa6.13□□□□□ -1.43
HMGB1P11-201ENST00000413899 FAM170BA6NMN3 283 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 K7ELQ4 463 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 TNFRSF10CO14798 259 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 LEFTY1O75610 366 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 EOMESO95936 686 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 NME1P15531 152 aaKnown RBP6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 ITGB7P26010 798 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 CCNFP41002 786 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 EIF6P56537 245 aaKnown RBP6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 ARSHQ5FYA8 562 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 DUSP27Q5VZP5 1158 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 INTS3Q68E01 1043 aaKnown RBP6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 LETMD1Q6P1Q0 360 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 NLRC3Q7RTR2 1065 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 MCF2L2Q86YR7 1114 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 DNAJB8Q8NHS0 232 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 PPP1R13LQ8WUF5 828 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 TM9SF2Q99805 663 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 DPH2Q9BQC3 489 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 ANTXR1Q9H6X2 564 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 ATG3Q9NT62 314 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 KLHL3Q9UH77 587 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 CEP131Q9UPN4 1083 aa6.12□□□□□ -1.43
HMGB1P11-201ENST00000413899 PRR19A6NJB7 356 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 WDR64B1ANS9 1081 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 IGF2BP3O00425 579 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 RGS13O14921 159 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 ZNF746Q6NUN9 644 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 CCDC81Q6ZN84 652 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 C22orf34Q6ZV56 151 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 ZNF765Q7L2R6 523 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 LSRQ86X29 649 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 FBXL6Q8N531 539 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 C19orf47Q8N9M1 422 aaKnown RBP6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 COX4I2Q96KJ9 171 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 CCDC74BQ96LY2 380 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 CRBNQ96SW2 442 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 MIPEPQ99797 713 aa6.11□□□□□ -1.43
HMGB1P11-201ENST00000413899 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms