RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
SEMA3F-202ENST00000413852 TTLL11Q8NHH1 800 aa16.62■□□□□ 0.25
SEMA3F-202ENST00000413852 STRBPQ96SI9 672 aaKnown RBP16.62■□□□□ 0.25
SEMA3F-202ENST00000413852 SLIT3O75094 1523 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 PTPREP23469 700 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 TCIRG1Q13488 830 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 IFNL3Q8IZI9 196 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 RABGGTAQ92696 567 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 NAPBQ9H115 298 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 HDAC6Q9UBN7 1215 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 SARSP49591 514 aaKnown RBP16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 EVX2Q03828 476 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 ZNF174Q15697 407 aa16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 ENOX1Q8TC92 643 aaKnown RBP16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 BAZ2BQ9UIF8 2168 aaKnown RBP16.61■□□□□ 0.25
SEMA3F-202ENST00000413852 WTIPA6NIX2 430 aaPredicted RBP16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 PPFIBP1Q86W92 1011 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 SLF1Q9BQI6 1058 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 ASAP1Q9ULH1 1129 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 CTNND2Q9UQB3 1225 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 FAM237AA0A1B0GTK4 181 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 BEND6Q5SZJ8 279 aaPredicted RBP16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 ISCA1Q9BUE6 129 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 CYP2D7A0A087X1C5 515 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 SRGAP2O75044 1071 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 FMNL1O95466 1100 aaPredicted RBP16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 ERVK-24P63145 666 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 SRGAP1Q7Z6B7 1085 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 FCHSD1Q86WN1 690 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 NUTM2AQ8IVF1 878 aaPredicted RBP16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 RABEP2Q9H5N1 569 aa16.6■□□□□ 0.25
SEMA3F-202ENST00000413852 RIC1Q4ADV7 1423 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 MINDY4BA8MYZ0 360 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 GYPCP04921 128 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 MRPS25P82663 173 aaKnown RBP16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 RTN1Q16799 776 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 GSPT2Q8IYD1 628 aaKnown RBP16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 TXLNBQ8N3L3 684 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 CCDC102AQ96A19 550 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 TAB2Q9NYJ8 693 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 A0A1B0GTH6 734 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 PLCD1P51178 756 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 SLC4A8Q2Y0W8 1093 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 MLKLQ8NB16 471 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 RIN2Q8WYP3 895 aaPredicted RBP16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 STRN4Q9NRL3 753 aa16.59■□□□□ 0.25
SEMA3F-202ENST00000413852 TCRBV5S4A2TA0A5A2 114 aa16.58■□□□□ 0.25
SEMA3F-202ENST00000413852 TUBB4AP04350 444 aa16.58■□□□□ 0.25
SEMA3F-202ENST00000413852 SAFBQ15424 915 aaKnown RBP eCLIP16.58■□□□□ 0.25
SEMA3F-202ENST00000413852 JAKMIP3Q5VZ66 844 aa16.58■□□□□ 0.25
SEMA3F-202ENST00000413852 SDR42E1Q8WUS8 393 aa16.58■□□□□ 0.25
SEMA3F-202ENST00000413852 SYMPKQ92797 1274 aaKnown RBP16.58■□□□□ 0.25
SEMA3F-202ENST00000413852 CHP1Q99653 195 aa16.58■□□□□ 0.25
SEMA3F-202ENST00000413852 TPM1P09493 284 aa16.58■□□□□ 0.24
SEMA3F-202ENST00000413852 VEGFAP15692 232 aaPredicted RBP16.58■□□□□ 0.24
SEMA3F-202ENST00000413852 TDO2P48775 406 aa16.58■□□□□ 0.24
SEMA3F-202ENST00000413852 SYNRGQ9UMZ2 1314 aa16.58■□□□□ 0.24
SEMA3F-202ENST00000413852 KIF5CO60282 957 aa16.58■□□□□ 0.24
SEMA3F-202ENST00000413852 ZCRB1Q8TBF4 217 aaKnown RBP16.58■□□□□ 0.24
SEMA3F-202ENST00000413852 PAGE5Q96GU1 130 aa16.58■□□□□ 0.24
SEMA3F-202ENST00000413852 TJP1Q07157 1748 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 MYO1CO00159 1063 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 PES1O00541 588 aaKnown RBP16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 ADAMTS7Q9UKP4 1686 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 LRRIQ3A6PVS8 624 aaPredicted RBP16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 GSG1L2A8MUP6 293 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 CAPZA3Q96KX2 299 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 RSPH14Q9UHP6 348 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 CDC23Q9UJX2 597 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 MAP2K7O14733 419 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 WTAPQ15007 396 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 MFSD6Q6ZSS7 791 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 GUCA1BQ9UMX6 200 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
SEMA3F-202ENST00000413852 MFAP3LO75121 409 aa16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 PLEKHA8P1O95397 391 aa16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 RASGRF1Q13972 1273 aa16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 FKBP15Q5T1M5 1219 aa16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 CRACR2BQ8N4Y2 399 aaPredicted RBP16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 PLIN2Q99541 437 aa16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 SLC4A4Q9Y6R1 1079 aa16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 IFNAR1P17181 557 aa16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 AKAP17AQ02040 695 aaKnown RBP16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 SRPRBQ9Y5M8 271 aaKnown RBP16.56■□□□□ 0.24
SEMA3F-202ENST00000413852 CCDC151A5D8V7 595 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 PPP1R3GB7ZBB8 358 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 BCAMP50895 628 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 CUL4BQ13620 913 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 AKNAD1Q5T1N1 836 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 NUP88Q99567 741 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms