RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 DNAJC18Q9H819 358 aa10.4□□□□□ -0.74
HERPUD2-203ENST00000413517 TCRBV5S4A2TA0A5A2 114 aa10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 MAP4K4O95819 1239 aaPredicted RBP10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 PDE6AP16499 860 aa10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 ATP5JP18859 108 aa10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 JAG1P78504 1218 aa10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 CRHR2Q13324 411 aa10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 PPIL2Q13356 520 aa10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 DGKZQ13574 1117 aa10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 SHROOM1Q2M3G4 852 aaPredicted RBP10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 OTUD7AQ8TE49 926 aaPredicted RBP10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 ABHD8Q96I13 439 aa10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 RIOK1Q9BRS2 568 aaKnown RBP10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 KCNH4Q9UQ05 1017 aa10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 KIAA0100Q14667 2235 aaKnown RBP10.39□□□□□ -0.75
HERPUD2-203ENST00000413517 GTF2A2P52657 109 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 INHBEP58166 350 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 EVX2Q03828 476 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 PPATQ06203 517 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 MCM6Q14566 821 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 SLC4A8Q2Y0W8 1093 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 NOM1Q5C9Z4 860 aaKnown RBP10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 SCYL3Q8IZE3 742 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 HAUS7Q99871 368 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 TRAIPQ9BWF2 469 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 PAG1Q9NWQ8 432 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 SAP30BPQ9UHR5 308 aaKnown RBP10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 PALD1Q9ULE6 856 aa10.38□□□□□ -0.75
HERPUD2-203ENST00000413517 ZNF532Q9HCE3 1301 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 BTBD19C9JJ37 291 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 TBC1D12O60347 775 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 IGSF3O75054 1194 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 BAG3O95817 575 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 ALDH1A1P00352 501 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 PLCG2P16885 1265 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 PTPRAP18433 802 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 MAP3K12Q12852 859 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 KCTD17Q8N5Z5 321 aa10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 NOL10Q9BSC4 688 aaKnown RBP10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.37□□□□□ -0.75
HERPUD2-203ENST00000413517 SALL3Q9BXA9 1300 aa10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 CTNND1O60716 968 aaKnown RBP10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 FKTNO75072 461 aa10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 CETPP11597 493 aa10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 ADD2P35612 726 aa10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 SNAPC2Q13487 334 aa10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 TTF1Q15361 905 aaPredicted RBP10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 TAF1CQ15572 869 aaPredicted RBP10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 SLC9C2Q5TAH2 1124 aa10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 CTU1Q7Z7A3 348 aaKnown RBP10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 METTL16Q86W50 562 aaKnown RBP10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 LCORLQ8N3X6 602 aa10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 EXOC6Q8TAG9 804 aa10.36□□□□□ -0.75
HERPUD2-203ENST00000413517 ADGRA2Q96PE1 1338 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 MAGEB6P1A0A0J9YX57 407 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 SMIM22K7EJ46 135 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 CAP2P40123 477 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 GPAT2Q6NUI2 795 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 ARMT1Q9H993 441 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 ECHDC1Q9NTX5 307 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 PI4KBQ9UBF8 816 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 AFG3L2Q9Y4W6 797 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 ZHX2Q9Y6X8 837 aa10.35□□□□□ -0.75
HERPUD2-203ENST00000413517 CENPFP49454 3210 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 A0A0G2JLL6 359 aaPredicted RBP10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 PRKAB2O43741 272 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 MBD4O95243 580 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 OTUD7BQ6GQQ9 843 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 TMED8Q6PL24 325 aaPredicted RBP10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 PRRT2Q7Z6L0 340 aaPredicted RBP10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 PI4K2BQ8TCG2 481 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 CD99L2Q8TCZ2 262 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 SDR42E1Q8WUS8 393 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 DHX36Q9H2U1 1008 aaKnown RBP10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 PICK1Q9NRD5 415 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 HERC5Q9UII4 1024 aaKnown RBP10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 SUPT16HQ9Y5B9 1047 aaKnown RBP10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 PARP14Q460N5 1801 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 GREB1LQ9C091 1923 aaPredicted RBP10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 PDE4DIPQ5VU43 2346 aa10.34□□□□□ -0.75
HERPUD2-203ENST00000413517 TNRC18O15417 2968 aaPredicted RBP10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 RLFQ13129 1914 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 TRIM75PA6NK02 468 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 PDHXO00330 501 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 CXCL11O14625 94 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 GDF11O95390 407 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 CYP2D6P10635 497 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 CTGFP29279 349 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 USP5P45974 858 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 PLCD1P51178 756 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 HDAC1Q13547 482 aaPredicted RBP10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 HIC1Q14526 733 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 OTOP1Q7RTM1 612 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 ANKRD23Q86SG2 305 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 CCDC97Q96F63 343 aaPredicted RBP10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 ARHGAP39Q9C0H5 1083 aa10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 PUS7LQ9H0K6 701 aaKnown RBP10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 ZCCHC17Q9NP64 241 aaKnown RBP10.33□□□□□ -0.76
HERPUD2-203ENST00000413517 RBBP6Q7Z6E9 1792 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms