RNA–Protein interactions for RNA: ENST00000413388.2

SLC9A3R1-202, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2 BASIC

Gene SLC9A3R1, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-202ENST00000413388 RBBP6Q7Z6E9 1792 aaKnown RBP21.27■■□□□ 1
SLC9A3R1-202ENST00000413388 PTPRFP10586 1907 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 C19orf81C9J6K1 198 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 USP17L10C9JJH3 530 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 POLR3DP05423 398 aaPredicted RBP21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 FLT3LGP49771 235 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 MTFR1Q15390 333 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 FAM110CQ1W6H9 321 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 SIRT2Q8IXJ6 389 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 NKX2-3Q8TAU0 364 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 ASCC2Q9H1I8 757 aaPredicted RBP21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 DNAJC18Q9H819 358 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 SERPINB13Q9UIV8 391 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 ZBTB21Q9ULJ3 1066 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 ATAD5Q96QE3 1844 aa21.26■□□□□ 0.99
SLC9A3R1-202ENST00000413388 ADCY3O60266 1144 aa21.25■□□□□ 0.99
SLC9A3R1-202ENST00000413388 PDE3AQ14432 1141 aa21.25■□□□□ 0.99
SLC9A3R1-202ENST00000413388 CRNKL1Q9BZJ0 848 aaKnown RBP21.25■□□□□ 0.99
SLC9A3R1-202ENST00000413388 RNF208Q9H0X6 261 aa21.25■□□□□ 0.99
SLC9A3R1-202ENST00000413388 GH2P01242 217 aa21.24■□□□□ 0.99
SLC9A3R1-202ENST00000413388 CCL5P13501 91 aa21.24■□□□□ 0.99
SLC9A3R1-202ENST00000413388 PDE6AP16499 860 aa21.24■□□□□ 0.99
SLC9A3R1-202ENST00000413388 GCC1Q96CN9 775 aa21.24■□□□□ 0.99
SLC9A3R1-202ENST00000413388 FEZ1Q99689 392 aa21.24■□□□□ 0.99
SLC9A3R1-202ENST00000413388 CERKLQ49MI3 558 aaPredicted RBP21.23■□□□□ 0.99
SLC9A3R1-202ENST00000413388 EHD4Q9H223 541 aa21.23■□□□□ 0.99
SLC9A3R1-202ENST00000413388 BOLA2Q9H3K6 86 aa21.23■□□□□ 0.99
SLC9A3R1-202ENST00000413388 CABP5Q9NP86 173 aa21.23■□□□□ 0.99
SLC9A3R1-202ENST00000413388 ZNF532Q9HCE3 1301 aa21.23■□□□□ 0.99
SLC9A3R1-202ENST00000413388 FOCADQ5VW36 1801 aa21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 JAG1P78504 1218 aa21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 IRF5Q13568 498 aa21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 RAB3GAP1Q15042 981 aa21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 SHROOM1Q2M3G4 852 aaPredicted RBP21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 USP17L2Q6R6M4 530 aa21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 CCAR1Q8IX12 1150 aaKnown RBP21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 RIOK1Q9BRS2 568 aaKnown RBP21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 LRRCC1Q9C099 1032 aa21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 MGAMO43451 1857 aa21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 CDK5RAP2Q96SN8 1893 aa21.22■□□□□ 0.99
SLC9A3R1-202ENST00000413388 BRCA2P51587 3418 aa21.21■□□□□ 0.99
SLC9A3R1-202ENST00000413388 SLC34A2O95436 690 aa21.21■□□□□ 0.99
SLC9A3R1-202ENST00000413388 GJB1P08034 283 aa21.21■□□□□ 0.99
SLC9A3R1-202ENST00000413388 ELNP15502 786 aa21.21■□□□□ 0.99
SLC9A3R1-202ENST00000413388 ABCB5Q2M3G0 1257 aa21.21■□□□□ 0.99
SLC9A3R1-202ENST00000413388 C20orf194Q5TEA3 1177 aa21.21■□□□□ 0.99
SLC9A3R1-202ENST00000413388 PXYLP1Q8TE99 480 aa21.21■□□□□ 0.99
SLC9A3R1-202ENST00000413388 PAG1Q9NWQ8 432 aa21.21■□□□□ 0.99
SLC9A3R1-202ENST00000413388 MCM9Q9NXL9 1143 aa21.21■□□□□ 0.99
SLC9A3R1-202ENST00000413388 LOC285556D6RIA3 1793 aa21.2■□□□□ 0.99
SLC9A3R1-202ENST00000413388 SIPA1L1O43166 1804 aa21.2■□□□□ 0.98
SLC9A3R1-202ENST00000413388 MKI67P46013 3256 aaKnown RBP21.2■□□□□ 0.98
SLC9A3R1-202ENST00000413388 MYH1P12882 1939 aa21.2■□□□□ 0.98
SLC9A3R1-202ENST00000413388 HOXA7P31268 230 aaPredicted RBP21.2■□□□□ 0.98
SLC9A3R1-202ENST00000413388 TATDN1Q6P1N9 297 aa21.2■□□□□ 0.98
SLC9A3R1-202ENST00000413388 P2RX7Q99572 595 aaKnown RBP21.2■□□□□ 0.98
SLC9A3R1-202ENST00000413388 INHAP05111 366 aa21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 ATP5JP18859 108 aa21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 GJA8P48165 433 aa21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 PLCD1P51178 756 aa21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP14P54578 494 aa21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 HERVK_113P62684 666 aa21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 ZYXQ15942 572 aaKnown RBP21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 GPRC5AQ8NFJ5 357 aa21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 GTF3C2Q8WUA4 911 aaPredicted RBP21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 EDC3Q96F86 508 aaKnown RBP21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 CWC22Q9HCG8 908 aaKnown RBP21.19■□□□□ 0.98
SLC9A3R1-202ENST00000413388 MPHOSPH10O00566 681 aaKnown RBP21.18■□□□□ 0.98
SLC9A3R1-202ENST00000413388 DDRGK1Q96HY6 314 aa21.18■□□□□ 0.98
SLC9A3R1-202ENST00000413388 UNC93B1Q9H1C4 597 aa21.18■□□□□ 0.98
SLC9A3R1-202ENST00000413388 AMOTL1Q8IY63 956 aa21.17■□□□□ 0.98
SLC9A3R1-202ENST00000413388 U2AF1L4Q8WU68 220 aaKnown RBP21.17■□□□□ 0.98
SLC9A3R1-202ENST00000413388 SDR42E1Q8WUS8 393 aa21.17■□□□□ 0.98
SLC9A3R1-202ENST00000413388 HAUS7Q99871 368 aa21.17■□□□□ 0.98
SLC9A3R1-202ENST00000413388 PAGR1Q9BTK6 254 aa21.17■□□□□ 0.98
SLC9A3R1-202ENST00000413388 ARMT1Q9H993 441 aa21.17■□□□□ 0.98
SLC9A3R1-202ENST00000413388 EMILIN3Q9NT22 766 aa21.17■□□□□ 0.98
SLC9A3R1-202ENST00000413388 MORF4L1Q9UBU8 362 aa21.17■□□□□ 0.98
SLC9A3R1-202ENST00000413388 TCRBV5S4A2TA0A5A2 114 aa21.16■□□□□ 0.98
SLC9A3R1-202ENST00000413388 TFRCP02786 760 aaKnown RBP21.16■□□□□ 0.98
SLC9A3R1-202ENST00000413388 ZSCAN25Q6NSZ9 544 aa21.16■□□□□ 0.98
SLC9A3R1-202ENST00000413388 LCORLQ8N3X6 602 aa21.16■□□□□ 0.98
SLC9A3R1-202ENST00000413388 DPF3Q92784 378 aa21.16■□□□□ 0.98
SLC9A3R1-202ENST00000413388 GPATCH3Q96I76 525 aa21.16■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP17L15C9J2P7 530 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP17L13C9JLJ4 530 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP17L11C9JVI0 530 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP17L18D6R9N7 530 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP17L22D6RA61 530 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP17L17D6RBQ6 530 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP17L19D6RCP7 530 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP17L20D6RJB6 530 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 SMARCA5O60264 1052 aaPredicted RBP21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 MBD4O95243 580 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 SHMT1P34896 483 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 ADD2P35612 726 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 USP17L24Q0WX57 530 aa21.15■□□□□ 0.98
SLC9A3R1-202ENST00000413388 SHISA4Q96DD7 197 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms