RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 CALM2P0DP24 149 aa28.37■■■□□ 2.13
VRK2-202ENST00000412104 CALM3P0DP25 149 aa28.37■■■□□ 2.13
VRK2-202ENST00000412104 HMGB2P26583 209 aaKnown RBP28.37■■■□□ 2.13
VRK2-202ENST00000412104 MARCKSP29966 332 aaPredicted RBP28.37■■■□□ 2.13
VRK2-202ENST00000412104 USP5P45974 858 aa28.37■■■□□ 2.13
VRK2-202ENST00000412104 FAM47AQ5JRC9 791 aa28.37■■■□□ 2.13
VRK2-202ENST00000412104 RBM28Q9NW13 759 aaKnown RBP28.37■■■□□ 2.13
VRK2-202ENST00000412104 CMA1P23946 247 aa28.37■■■□□ 2.13
VRK2-202ENST00000412104 ZNF165P49910 485 aa28.37■■■□□ 2.13
VRK2-202ENST00000412104 STX1AQ16623 288 aa28.37■■■□□ 2.13
VRK2-202ENST00000412104 NMT2O60551 498 aa28.36■■■□□ 2.13
VRK2-202ENST00000412104 BAG3O95817 575 aa28.36■■■□□ 2.13
VRK2-202ENST00000412104 FUT2Q10981 343 aa28.36■■■□□ 2.13
VRK2-202ENST00000412104 ZNF827Q17R98 1081 aa28.36■■■□□ 2.13
VRK2-202ENST00000412104 FOXP1Q9H334 677 aaPredicted RBP28.36■■■□□ 2.13
VRK2-202ENST00000412104 POLLQ9UGP5 575 aa28.36■■■□□ 2.13
VRK2-202ENST00000412104 PPP4CP60510 307 aa28.35■■■□□ 2.13
VRK2-202ENST00000412104 SLC4A8Q2Y0W8 1093 aa28.35■■■□□ 2.13
VRK2-202ENST00000412104 C12orf60Q5U649 245 aa28.35■■■□□ 2.13
VRK2-202ENST00000412104 JMYQ8N9B5 988 aa28.35■■■□□ 2.13
VRK2-202ENST00000412104 TBC1D16Q8TBP0 767 aa28.35■■■□□ 2.13
VRK2-202ENST00000412104 NOL10Q9BSC4 688 aaKnown RBP28.35■■■□□ 2.13
VRK2-202ENST00000412104 CDK5RAP2Q96SN8 1893 aa28.35■■■□□ 2.13
VRK2-202ENST00000412104 PLEKHA8P1O95397 391 aa28.35■■■□□ 2.13
VRK2-202ENST00000412104 LDHCP07864 332 aa28.35■■■□□ 2.13
VRK2-202ENST00000412104 AEBP2Q6ZN18 517 aaPredicted RBP28.35■■■□□ 2.13
VRK2-202ENST00000412104 NRXN2Q9P2S2 1712 aa28.35■■■□□ 2.13
VRK2-202ENST00000412104 ROBO3Q96MS0 1386 aa28.34■■■□□ 2.13
VRK2-202ENST00000412104 PFKFB1P16118 471 aa28.34■■■□□ 2.13
VRK2-202ENST00000412104 AKAP17AQ02040 695 aaKnown RBP28.34■■■□□ 2.13
VRK2-202ENST00000412104 SDF4Q9BRK5 362 aa28.34■■■□□ 2.13
VRK2-202ENST00000412104 RTFDC1Q9BY42 306 aaPredicted RBP28.34■■■□□ 2.13
VRK2-202ENST00000412104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.33■■■□□ 2.13
VRK2-202ENST00000412104 TSPY2A6NKD2 308 aa28.33■■■□□ 2.13
VRK2-202ENST00000412104 C11orf57Q6ZUT1 292 aaPredicted RBP28.33■■■□□ 2.13
VRK2-202ENST00000412104 PRPF3O43395 683 aaKnown RBP28.33■■■□□ 2.13
VRK2-202ENST00000412104 PKN1Q16512 942 aa28.33■■■□□ 2.13
VRK2-202ENST00000412104 PPEF1O14829 653 aaPredicted RBP28.32■■■□□ 2.12
VRK2-202ENST00000412104 ZNF202O95125 648 aa28.32■■■□□ 2.12
VRK2-202ENST00000412104 TMTC3Q6ZXV5 915 aa28.32■■■□□ 2.12
VRK2-202ENST00000412104 TMC4Q7Z404 712 aa28.32■■■□□ 2.12
VRK2-202ENST00000412104 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.32■■■□□ 2.12
VRK2-202ENST00000412104 RBM6P78332 1123 aaKnown RBP28.31■■■□□ 2.12
VRK2-202ENST00000412104 TGFBRAP1Q8WUH2 860 aa28.31■■■□□ 2.12
VRK2-202ENST00000412104 ERCC4Q92889 916 aaPredicted RBP28.31■■■□□ 2.12
VRK2-202ENST00000412104 SHISA4Q96DD7 197 aa28.31■■■□□ 2.12
VRK2-202ENST00000412104 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.31■■■□□ 2.12
VRK2-202ENST00000412104 ZNF500O60304 480 aaPredicted RBP28.31■■■□□ 2.12
VRK2-202ENST00000412104 TOB1P50616 345 aaPredicted RBP28.31■■■□□ 2.12
VRK2-202ENST00000412104 NR5A1Q13285 461 aa28.31■■■□□ 2.12
VRK2-202ENST00000412104 AKT1S1Q96B36 256 aa28.31■■■□□ 2.12
VRK2-202ENST00000412104 C6orf229H3BNL8 230 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 PLSCR1O15162 318 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 XBP1P17861 261 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 SHC4Q6S5L8 630 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 COL23A1Q86Y22 540 aaPredicted RBP28.3■■■□□ 2.12
VRK2-202ENST00000412104 CERS3Q8IU89 383 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 SP8Q8IXZ3 490 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 AMOTL1Q8IY63 956 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 MPNDQ8N594 471 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 CTCFLQ8NI51 663 aaPredicted RBP28.3■■■□□ 2.12
VRK2-202ENST00000412104 OXER1Q8TDS5 423 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 DYNLL2Q96FJ2 89 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 ANO10Q9NW15 660 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 DDX60LQ5H9U9 1706 aaKnown RBP28.3■■■□□ 2.12
VRK2-202ENST00000412104 CNTNAP5Q8WYK1 1306 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 BTDP43251 543 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 NT5C2P49902 561 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 RILPL1Q5EBL4 403 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 MFSD14BQ5SR56 506 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 RCSD1Q6JBY9 416 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 NLGN1Q8N2Q7 840 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 VPS54Q9P1Q0 977 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 HPSEQ9Y251 543 aa28.3■■■□□ 2.12
VRK2-202ENST00000412104 IQCB1Q15051 598 aa28.29■■■□□ 2.12
VRK2-202ENST00000412104 V9GY48 417 aaPredicted RBP28.29■■■□□ 2.12
VRK2-202ENST00000412104 A0A087WWV3 80 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 hCG_1642624A0A1W2PR95 340 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 CUTAO60888 179 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 TFAP4Q01664 338 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 CLIC6Q96NY7 704 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 GPR75-ASB3A0A0A6YYF3 556 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 FAM237AA0A1B0GTK4 181 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 RESP18Q5W5W9 173 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 MAPKAPK5Q8IW41 473 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 TBC1D22AQ8WUA7 517 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 PHF20Q9BVI0 1012 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 KIAA1468Q9P260 1216 aa28.28■■■□□ 2.12
VRK2-202ENST00000412104 APBA3O96018 575 aa28.27■■■□□ 2.12
VRK2-202ENST00000412104 SYKP43405 635 aa28.27■■■□□ 2.12
VRK2-202ENST00000412104 ZNF772Q68DY9 489 aaPredicted RBP28.27■■■□□ 2.12
VRK2-202ENST00000412104 SRBD1Q8N5C6 995 aaKnown RBP28.27■■■□□ 2.12
VRK2-202ENST00000412104 ATP6V0A2Q9Y487 856 aa28.27■■■□□ 2.12
VRK2-202ENST00000412104 TIGD1Q96MW7 591 aa28.26■■■□□ 2.11
VRK2-202ENST00000412104 IL17RBQ9NRM6 502 aa28.26■■■□□ 2.11
VRK2-202ENST00000412104 COL11A2P13942 1736 aaPredicted RBP28.26■■■□□ 2.11
VRK2-202ENST00000412104 KRI1Q8N9T8 703 aaKnown RBP28.26■■■□□ 2.11
VRK2-202ENST00000412104 MKNK2Q9HBH9 465 aa28.26■■■□□ 2.11
VRK2-202ENST00000412104 SRGNP10124 158 aa28.25■■■□□ 2.11
VRK2-202ENST00000412104 KRT2P35908 639 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms