RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 STK11IPQ8N1F8 1099 aa16.66■□□□□ 0.26
CPNE1-206ENST00000412056 PICK1Q9NRD5 415 aa16.66■□□□□ 0.26
CPNE1-206ENST00000412056 CDK8P49336 464 aa16.65■□□□□ 0.26
CPNE1-206ENST00000412056 PPATQ06203 517 aa16.65■□□□□ 0.26
CPNE1-206ENST00000412056 PPIL2Q13356 520 aa16.65■□□□□ 0.26
CPNE1-206ENST00000412056 ALX1Q15699 326 aa16.65■□□□□ 0.26
CPNE1-206ENST00000412056 RUFY2Q8WXA3 655 aa16.65■□□□□ 0.26
CPNE1-206ENST00000412056 SWAP70Q9UH65 585 aa16.65■□□□□ 0.26
CPNE1-206ENST00000412056 LOC285556D6RIA3 1793 aa16.64■□□□□ 0.25
CPNE1-206ENST00000412056 IRF6O14896 467 aa16.64■□□□□ 0.25
CPNE1-206ENST00000412056 PPARAQ07869 468 aa16.64■□□□□ 0.25
CPNE1-206ENST00000412056 CERKLQ49MI3 558 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-206ENST00000412056 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
CPNE1-206ENST00000412056 MYH4Q9Y623 1939 aa16.64■□□□□ 0.25
CPNE1-206ENST00000412056 ZMYM6O95789 1325 aa16.64■□□□□ 0.25
CPNE1-206ENST00000412056 MANSC4A6NHS7 340 aaPredicted RBP16.63■□□□□ 0.25
CPNE1-206ENST00000412056 SGSM2O43147 1006 aa16.63■□□□□ 0.25
CPNE1-206ENST00000412056 GH2P01242 217 aa16.63■□□□□ 0.25
CPNE1-206ENST00000412056 FGAP02671 866 aa16.63■□□□□ 0.25
CPNE1-206ENST00000412056 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
CPNE1-206ENST00000412056 MS4A4AQ96JQ5 239 aa16.63■□□□□ 0.25
CPNE1-206ENST00000412056 TAOK2Q9UL54 1235 aa16.63■□□□□ 0.25
CPNE1-206ENST00000412056 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
CPNE1-206ENST00000412056 USP17L5A8MUK1 530 aa16.62■□□□□ 0.25
CPNE1-206ENST00000412056 ASNSP08243 561 aa16.62■□□□□ 0.25
CPNE1-206ENST00000412056 AKR1B1P15121 316 aa16.62■□□□□ 0.25
CPNE1-206ENST00000412056 ABCB5Q2M3G0 1257 aa16.62■□□□□ 0.25
CPNE1-206ENST00000412056 DSCC1Q9BVC3 393 aa16.62■□□□□ 0.25
CPNE1-206ENST00000412056 KCNH4Q9UQ05 1017 aa16.62■□□□□ 0.25
CPNE1-206ENST00000412056 AFG3L2Q9Y4W6 797 aa16.62■□□□□ 0.25
CPNE1-206ENST00000412056 CDC45O75419 566 aa16.61■□□□□ 0.25
CPNE1-206ENST00000412056 GUCY1A2P33402 732 aa16.61■□□□□ 0.25
CPNE1-206ENST00000412056 GTF2A2P52657 109 aa16.61■□□□□ 0.25
CPNE1-206ENST00000412056 MAP2K1Q02750 393 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-206ENST00000412056 SREBF2Q12772 1141 aa16.61■□□□□ 0.25
CPNE1-206ENST00000412056 BRI3BPQ8WY22 251 aa16.61■□□□□ 0.25
CPNE1-206ENST00000412056 ESYT1Q9BSJ8 1104 aa16.61■□□□□ 0.25
CPNE1-206ENST00000412056 GINM1Q9NU53 330 aa16.61■□□□□ 0.25
CPNE1-206ENST00000412056 WBP1LQ9NX94 342 aa16.61■□□□□ 0.25
CPNE1-206ENST00000412056 TACC3Q9Y6A5 838 aa16.61■□□□□ 0.25
CPNE1-206ENST00000412056 CCL15-CCL14A0A0B4J2E2 113 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 TRIM75PA6NK02 468 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 MPHOSPH10O00566 681 aaKnown RBP16.6■□□□□ 0.25
CPNE1-206ENST00000412056 PRDM1O75626 825 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 HSPA1AP0DMV8 641 aaKnown RBP16.6■□□□□ 0.25
CPNE1-206ENST00000412056 HSPA1BP0DMV9 641 aaKnown RBP16.6■□□□□ 0.25
CPNE1-206ENST00000412056 RASA1P20936 1047 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 TM4SF4P48230 202 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 HAND2P61296 217 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 PTH1RQ03431 593 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 SNAPC2Q13487 334 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 SEPT2Q15019 361 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 CCL15Q16663 113 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 CABP5Q9NP86 173 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 ANAPC4Q9UJX5 808 aa16.6■□□□□ 0.25
CPNE1-206ENST00000412056 TESPA1A2RU30 521 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-206ENST00000412056 IGF2BP3O00425 579 aaKnown RBP eCLIP16.59■□□□□ 0.25
CPNE1-206ENST00000412056 CETPP11597 493 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 SPP2Q13103 211 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 CLEC10AQ8IUN9 316 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-206ENST00000412056 ZNF280CQ8ND82 737 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 CCDC17Q96LX7 622 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 PTPN18Q99952 460 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 NBPF3Q9H094 633 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 MKNK2Q9HBH9 465 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 AS3MTQ9HBK9 375 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 INCENPQ9NQS7 918 aa16.59■□□□□ 0.25
CPNE1-206ENST00000412056 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
CPNE1-206ENST00000412056 A0A0G2JLL6 359 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-206ENST00000412056 CXCL11O14625 94 aa16.58■□□□□ 0.24
CPNE1-206ENST00000412056 SLC3A2P08195 630 aaKnown RBP16.58■□□□□ 0.24
CPNE1-206ENST00000412056 PDE4BQ07343 736 aa16.58■□□□□ 0.24
CPNE1-206ENST00000412056 MOGSQ13724 837 aa16.58■□□□□ 0.24
CPNE1-206ENST00000412056 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
CPNE1-206ENST00000412056 PRRT2Q7Z6L0 340 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-206ENST00000412056 WDR18Q9BV38 432 aa16.58■□□□□ 0.24
CPNE1-206ENST00000412056 TBC1D2Q9BYX2 928 aa16.58■□□□□ 0.24
CPNE1-206ENST00000412056 INHBEP58166 350 aa16.57■□□□□ 0.24
CPNE1-206ENST00000412056 DGKZQ13574 1117 aa16.57■□□□□ 0.24
CPNE1-206ENST00000412056 MTMR2Q13614 643 aa16.57■□□□□ 0.24
CPNE1-206ENST00000412056 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
CPNE1-206ENST00000412056 TBC1D10CQ8IV04 446 aa16.57■□□□□ 0.24
CPNE1-206ENST00000412056 RNF186Q9NXI6 227 aa16.57■□□□□ 0.24
CPNE1-206ENST00000412056 BTBD19C9JJ37 291 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 FOXN1O15353 648 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 HMGCS2P54868 508 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 GADL1Q6ZQY3 521 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 FAM43AQ8N2R8 423 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 ACER1Q8TDN7 264 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 STAG1Q8WVM7 1258 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 BEGAINQ9BUH8 593 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.56■□□□□ 0.24
CPNE1-206ENST00000412056 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
CPNE1-206ENST00000412056 ZNF287Q9HBT7 754 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 CTNNA3Q9UI47 895 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 TSKSQ9UJT2 592 aa16.56■□□□□ 0.24
CPNE1-206ENST00000412056 CASP8AP2Q9UKL3 1982 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms