RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 A0A0D9SFI3 127 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 CXCL11O14625 94 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 PCP11498 1178 aaKnown RBP9.82□□□□□ -0.84
RPE-204ENST00000411934 PTPRAP18433 802 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 SNAPC2Q13487 334 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 NOM1Q5C9Z4 860 aaKnown RBP9.82□□□□□ -0.84
RPE-204ENST00000411934 OTUD7BQ6GQQ9 843 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 CTR9Q6PD62 1173 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 C16orf86Q6ZW13 317 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 NAPBQ9H115 298 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 ELP3Q9H9T3 547 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 AS3MTQ9HBK9 375 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 EPB41L4AQ9HCS5 686 aaPredicted RBP9.82□□□□□ -0.84
RPE-204ENST00000411934 SAP30BPQ9UHR5 308 aaKnown RBP9.82□□□□□ -0.84
RPE-204ENST00000411934 FZD1Q9UP38 647 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 PTPRFP10586 1907 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 LAMA4Q16363 1823 aa9.82□□□□□ -0.84
RPE-204ENST00000411934 LOC285556D6RIA3 1793 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 USP17L12C9JPN9 530 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 USP17L21D6R901 530 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 PRKAB2O43741 272 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 AOC2O75106 756 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 CHGBP05060 677 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 SLC3A2P08195 630 aaKnown RBP9.81□□□□□ -0.84
RPE-204ENST00000411934 CETPP11597 493 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 GJA5P36382 358 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 TDO2P48775 406 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 PLCD1P51178 756 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 KIF23Q02241 960 aaPredicted RBP9.81□□□□□ -0.84
RPE-204ENST00000411934 NMIQ13287 307 aaPredicted RBP9.81□□□□□ -0.84
RPE-204ENST00000411934 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 IFNL3Q8IZI9 196 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 ZKSCAN4Q969J2 545 aaPredicted RBP9.81□□□□□ -0.84
RPE-204ENST00000411934 MS4A4AQ96JQ5 239 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 WDR18Q9BV38 432 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 DSCC1Q9BVC3 393 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 CABP5Q9NP86 173 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 ANAPC4Q9UJX5 808 aa9.81□□□□□ -0.84
RPE-204ENST00000411934 GREB1LQ9C091 1923 aaPredicted RBP9.81□□□□□ -0.84
RPE-204ENST00000411934 PLIN4Q96Q06 1357 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 A0A0G2JLL6 359 aaPredicted RBP9.8□□□□□ -0.84
RPE-204ENST00000411934 IRF6O14896 467 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 SHMT1P34896 483 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 PDE4BQ07343 736 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 GRM1Q13255 1194 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 CERKLQ49MI3 558 aaPredicted RBP9.8□□□□□ -0.84
RPE-204ENST00000411934 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 TMEM179Q6ZVK1 233 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 PRRT2Q7Z6L0 340 aaPredicted RBP9.8□□□□□ -0.84
RPE-204ENST00000411934 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
RPE-204ENST00000411934 OTUD5Q96G74 571 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 FAM227BQ96M60 508 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 SEC62Q99442 399 aaKnown RBP9.8□□□□□ -0.84
RPE-204ENST00000411934 ZBTB21Q9ULJ3 1066 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 SLC45A1Q9Y2W3 748 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 AFG3L2Q9Y4W6 797 aa9.8□□□□□ -0.84
RPE-204ENST00000411934 C19orf81C9J6K1 198 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 FOXP2O15409 715 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 APPP05067 770 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 HSPA1AP0DMV8 641 aaKnown RBP9.79□□□□□ -0.84
RPE-204ENST00000411934 HSPA1BP0DMV9 641 aaKnown RBP9.79□□□□□ -0.84
RPE-204ENST00000411934 HSPD1P10809 573 aaKnown RBP9.79□□□□□ -0.84
RPE-204ENST00000411934 CHMLP26374 656 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 CDK8P49336 464 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 CTCFP49711 727 aaPredicted RBP9.79□□□□□ -0.84
RPE-204ENST00000411934 PPARAQ07869 468 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 ABCB5Q2M3G0 1257 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 SH3D19Q5HYK7 790 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 CWC27Q6UX04 472 aaKnown RBP9.79□□□□□ -0.84
RPE-204ENST00000411934 FASTKD5Q7L8L6 764 aaKnown RBP9.79□□□□□ -0.84
RPE-204ENST00000411934 ANKRD23Q86SG2 305 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 ZNF589Q86UQ0 364 aaPredicted RBP9.79□□□□□ -0.84
RPE-204ENST00000411934 IFNL1Q8IU54 200 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 ZNF280CQ8ND82 737 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 SYNPO2Q9UMS6 1093 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 ZHX2Q9Y6X8 837 aa9.79□□□□□ -0.84
RPE-204ENST00000411934 CCL15-CCL14A0A0B4J2E2 113 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 FAM196BA6NMK8 535 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 SGSM2O43147 1006 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 FGRP09769 529 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 USP14P54578 494 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 PABPC4Q13310 644 aaKnown RBP eCLIP9.78□□□□□ -0.84
RPE-204ENST00000411934 CCL15Q16663 113 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 CASC1Q6TDU7 716 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 C12orf42Q96LP6 360 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 ZIC5Q96T25 663 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 SH2D4AQ9H788 454 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 CTNNA3Q9UI47 895 aa9.78□□□□□ -0.84
RPE-204ENST00000411934 USP17L10C9JJH3 530 aa9.77□□□□□ -0.85
RPE-204ENST00000411934 ORC4O43929 436 aa9.77□□□□□ -0.85
RPE-204ENST00000411934 GDF11O95390 407 aa9.77□□□□□ -0.85
RPE-204ENST00000411934 GH2P01242 217 aa9.77□□□□□ -0.85
RPE-204ENST00000411934 FGAP02671 866 aa9.77□□□□□ -0.85
RPE-204ENST00000411934 BACE1P56817 501 aa9.77□□□□□ -0.85
RPE-204ENST00000411934 RRP1BQ14684 758 aaKnown RBP9.77□□□□□ -0.85
RPE-204ENST00000411934 POTEGQ6S5H5 508 aa9.77□□□□□ -0.85
RPE-204ENST00000411934 CCDC129Q6ZRS4 1044 aa9.77□□□□□ -0.85
RPE-204ENST00000411934 BRI3BPQ8WY22 251 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms