RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 MIPEPQ99797 713 aa3.73□□□□□ -1.81
RNU2-54P-201ENST00000410299 TPX2Q9ULW0 747 aaKnown RBP3.73□□□□□ -1.81
RNU2-54P-201ENST00000410299 SNX11Q9Y5W9 270 aa3.73□□□□□ -1.81
RNU2-54P-201ENST00000410299 CARMIL2Q6F5E8 1435 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 CAP2P40123 477 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 XPCQ01831 940 aaPredicted RBP3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 IKZF1Q13422 519 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 TAF1CQ15572 869 aaPredicted RBP3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 CDKAL1Q5VV42 579 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 OGFOD2Q6N063 350 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 LETMD1Q6P1Q0 360 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 TMC4Q7Z404 712 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 FBXO33Q7Z6M2 555 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 ASB11Q8WXH4 323 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 HSPA12BQ96MM6 686 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 DPH2Q9BQC3 489 aaPredicted RBP3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 MIR1-1HGQ9H1L0 117 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 MAPK8IP1Q9UQF2 711 aa3.72□□□□□ -1.81
RNU2-54P-201ENST00000410299 PITPNM2Q9BZ72 1349 aa3.71□□□□□ -1.81
RNU2-54P-201ENST00000410299 FAM155AB1AL88 458 aaPredicted RBP3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 BIN1O00499 593 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 CBX7O95931 251 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 CST3P01034 146 aaPredicted RBP3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 PGRP06401 933 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 CLCN7P51798 805 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 ZP2Q05996 745 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 TSNAXIP1Q2TAA8 658 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 SFRP5Q5T4F7 317 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 SLC23A3Q6PIS1 610 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 ATG4DQ86TL0 474 aaPredicted RBP3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 MFSD2AQ8NA29 543 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 PHC3Q8NDX5 983 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 GZF1Q9H116 711 aaPredicted RBP3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 ATP13A1Q9HD20 1204 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 TJP2Q9UDY2 1190 aa3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.71□□□□□ -1.82
RNU2-54P-201ENST00000410299 H3BS24 57 aa3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 ST13P50502 369 aaKnown RBP3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 BNC2Q6ZN30 1099 aaPredicted RBP3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 CDH24Q86UP0 819 aa3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 MFSD4AQ8N468 514 aa3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 TMEM87BQ96K49 555 aa3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 NOC4LQ9BVI4 516 aaKnown RBP3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 SEMA3GQ9NS98 782 aa3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 CORINQ9Y5Q5 1042 aa3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 TACC3Q9Y6A5 838 aa3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 CAPN6Q9Y6Q1 641 aa3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 USP31Q70CQ4 1352 aa3.7□□□□□ -1.82
RNU2-54P-201ENST00000410299 UPK3BL1B0FP48 263 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 UPK3BL2E5RIL1 263 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 SORBS3O60504 671 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 ZNF865P0CJ78 1059 aaPredicted RBP3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 RLBP1P12271 317 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 RPL6Q02878 288 aaKnown RBP3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 CAMK2GQ13555 558 aaPredicted RBP3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 C22orf34Q6ZV56 151 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 MCATQ8IVS2 390 aaKnown RBP3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 MRPL41Q8IXM3 137 aaKnown RBP3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 POU5F2Q8N7G0 328 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 FAM168AQ92567 244 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 ACSF2Q96CM8 615 aaPredicted RBP3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 CRELD1Q96HD1 420 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 CARS2Q9HA77 564 aaKnown RBP3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 VTI1BQ9UEU0 232 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 ST14Q9Y5Y6 855 aa3.69□□□□□ -1.82
RNU2-54P-201ENST00000410299 FAM221AA4D161 298 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 F13A1P00488 732 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 PF4P02776 101 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 PDE4BQ07343 736 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 TNK2Q07912 1038 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 CCDC27Q2M243 656 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 ZNF648Q5T619 568 aaPredicted RBP3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 SLC6A19Q695T7 634 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 FLAD1Q8NFF5 587 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 DNAJB8Q8NHS0 232 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 UBE2FQ969M7 185 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 MRS2Q9HD23 443 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 LMCD1Q9NZU5 365 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 ZSWIM5Q9P217 1185 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 CTNND2Q9UQB3 1225 aa3.68□□□□□ -1.82
RNU2-54P-201ENST00000410299 WASH4PA8MWX3 477 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 MINDY4BA8MYZ0 360 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 CILPO75339 1184 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 BPNT1O95861 308 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 C8AP07357 584 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 PLCG1P19174 1290 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 CYP7A1P22680 504 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 GBP2P32456 591 aaPredicted RBP3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 LMNB2Q03252 620 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 FAM160A1Q05DH4 1040 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 FYB2Q5VWT5 728 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 ZNF746Q6NUN9 644 aaPredicted RBP3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 CCDC84Q86UT8 332 aaPredicted RBP3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 ZSWIM9Q86XI8 627 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 RELL1Q8IUW5 271 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 PPP1R13LQ8WUF5 828 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 GATAD2BQ8WXI9 593 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 RHOVQ96L33 236 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 TMEM74Q96NL1 305 aa3.67□□□□□ -1.82
RNU2-54P-201ENST00000410299 C19orf73Q9NVV2 129 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms