RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 UNC79Q9P2D8 2635 aa9.14□□□□□ -0.95
UBE2F-204ENST00000409953 GVINP1Q7Z2Y8 2422 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 RFXAPO00287 272 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 PDE8AO60658 829 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 POU3F3P20264 500 aaPredicted RBP9.13□□□□□ -0.95
UBE2F-204ENST00000409953 CNGA1P29973 690 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 KCNJ4P48050 445 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 EIF4G2P78344 907 aaKnown RBP eCLIP9.13□□□□□ -0.95
UBE2F-204ENST00000409953 TMEM240Q5SV17 173 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 ASCL5Q7RTU5 278 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 PLBD2Q8NHP8 589 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 RALYQ9UKM9 306 aaKnown RBP9.13□□□□□ -0.95
UBE2F-204ENST00000409953 AGTPBP1Q9UPW5 1226 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 ZHX2Q9Y6X8 837 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 COL4A6Q14031 1691 aa9.13□□□□□ -0.95
UBE2F-204ENST00000409953 SETXQ7Z333 2677 aaKnown RBP9.12□□□□□ -0.95
UBE2F-204ENST00000409953 GPR179Q6PRD1 2367 aa9.12□□□□□ -0.95
UBE2F-204ENST00000409953 CRKP46108 304 aa9.12□□□□□ -0.95
UBE2F-204ENST00000409953 GCLCP48506 637 aaPredicted RBP9.12□□□□□ -0.95
UBE2F-204ENST00000409953 TREML2Q5T2D2 321 aa9.12□□□□□ -0.95
UBE2F-204ENST00000409953 C1orf53Q5VUE5 145 aa9.12□□□□□ -0.95
UBE2F-204ENST00000409953 CCDC174Q6PII3 467 aa9.12□□□□□ -0.95
UBE2F-204ENST00000409953 ATOH1Q92858 354 aaPredicted RBP9.12□□□□□ -0.95
UBE2F-204ENST00000409953 FERMT2Q96AC1 680 aa9.12□□□□□ -0.95
UBE2F-204ENST00000409953 APBA2Q99767 749 aa9.12□□□□□ -0.95
UBE2F-204ENST00000409953 METRNQ9UJH8 293 aa9.12□□□□□ -0.95
UBE2F-204ENST00000409953 TRANK1O15050 2925 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 GBF1Q92538 1859 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 SEC24BO95487 1268 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 IL1R1P14778 569 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 IL9P15248 144 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 RGS2P41220 211 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 ADCYAP1R1P41586 468 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 ST3GAL2Q16842 350 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 C16orf59Q7L2K0 433 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 DGLUCYQ7Z3D6 616 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 FAM83AQ86UY5 434 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 ARRDC4Q8NCT1 418 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 TMEM39AQ9NV64 488 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 TMOD2Q9NZR1 351 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 KNSTRNQ9Y448 316 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 MAP1BP46821 2468 aaKnown RBP9.11□□□□□ -0.95
UBE2F-204ENST00000409953 PTPRFP10586 1907 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 PLXNA3P51805 1871 aa9.11□□□□□ -0.95
UBE2F-204ENST00000409953 DNAH14Q0VDD8 3507 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 PRR23AA6NEV1 266 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 PQBP1O60828 265 aaKnown RBP9.1□□□□□ -0.95
UBE2F-204ENST00000409953 TRIM28Q13263 835 aaKnown RBP9.1□□□□□ -0.95
UBE2F-204ENST00000409953 PPIGQ13427 754 aaKnown RBP eCLIP9.1□□□□□ -0.95
UBE2F-204ENST00000409953 MFSD14BQ5SR56 506 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 MFSD14CQ5VZR4 134 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 ZNF365Q70YC5 407 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 ZNF804AQ7Z570 1209 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 SLC44A5Q8NCS7 719 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 USP6NLQ92738 828 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 JARID2Q92833 1246 aaPredicted RBP9.1□□□□□ -0.95
UBE2F-204ENST00000409953 ANKRD2Q9GZV1 360 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 PICK1Q9NRD5 415 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 AFG3L2Q9Y4W6 797 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 FAM208BQ5VWN6 2430 aa9.1□□□□□ -0.95
UBE2F-204ENST00000409953 UTYO14607 1347 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 GAKO14976 1311 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 ZNF521Q96K83 1311 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 TRIM75PA6NK02 468 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 PROB1E7EW31 1015 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 PTPRAP18433 802 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 RABGGTBP53611 331 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 PSRC1Q6PGN9 363 aaPredicted RBP9.09□□□□□ -0.95
UBE2F-204ENST00000409953 IRF2BPLQ9H1B7 796 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 BOLA1Q9Y3E2 137 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 TECTAO75443 2155 aa9.09□□□□□ -0.95
UBE2F-204ENST00000409953 EPOPA6NHQ4 379 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 SNAP23O00161 211 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 PCCAP05165 728 aaPredicted RBP9.08□□□□□ -0.96
UBE2F-204ENST00000409953 ACRP10323 421 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 SLC5A1P13866 664 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 MYOGP15173 224 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 PDE4AP27815 886 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 CTSWP56202 376 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 FKBP1CQ5VVH2 108 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 MFSD5Q6N075 450 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 SCYL3Q8IZE3 742 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 GREM2Q9H772 168 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 UBE2ZQ9H832 354 aaPredicted RBP9.08□□□□□ -0.96
UBE2F-204ENST00000409953 CERS4Q9HA82 394 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 IGSF5Q9NSI5 407 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 MORF4L1Q9UBU8 362 aa9.08□□□□□ -0.96
UBE2F-204ENST00000409953 USP24Q9UPU5 2620 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 APBB1O00213 710 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 PEX10O60683 326 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 TIMP1P01033 207 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 CSF2RAP15509 400 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 IGHMBP2P38935 993 aaKnown RBP9.07□□□□□ -0.96
UBE2F-204ENST00000409953 LEXMQ3ZCV2 418 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 EPHA10Q5JZY3 1008 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 MORN1Q5T089 497 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 ANO1Q5XXA6 986 aa9.07□□□□□ -0.96
UBE2F-204ENST00000409953 PTCRAQ6ISU1 281 aaPredicted RBP9.07□□□□□ -0.96
UBE2F-204ENST00000409953 SUGP1Q8IWZ8 645 aaKnown RBP9.07□□□□□ -0.96
UBE2F-204ENST00000409953 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms