RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.41■■□□□ 1.02
LSM5-204ENST00000409909 ZBTB21Q9ULJ3 1066 aa21.41■■□□□ 1.02
LSM5-204ENST00000409909 PTCH2Q9Y6C5 1203 aa21.41■■□□□ 1.02
LSM5-204ENST00000409909 MYH7P12883 1935 aa21.4■■□□□ 1.02
LSM5-204ENST00000409909 PRKAB2O43741 272 aa21.4■■□□□ 1.02
LSM5-204ENST00000409909 MBD4O95243 580 aa21.4■■□□□ 1.02
LSM5-204ENST00000409909 UBE3CQ15386 1083 aa21.4■■□□□ 1.02
LSM5-204ENST00000409909 SH3D19Q5HYK7 790 aa21.4■■□□□ 1.02
LSM5-204ENST00000409909 TRIM47Q96LD4 638 aa21.4■■□□□ 1.02
LSM5-204ENST00000409909 AS3MTQ9HBK9 375 aa21.4■■□□□ 1.02
LSM5-204ENST00000409909 DCP1AQ9NPI6 582 aaPredicted RBP21.4■■□□□ 1.02
LSM5-204ENST00000409909 GINM1Q9NU53 330 aa21.4■■□□□ 1.02
LSM5-204ENST00000409909 LOC285556D6RIA3 1793 aa21.4■■□□□ 1.02
LSM5-204ENST00000409909 NAV1Q8NEY1 1877 aa21.39■■□□□ 1.02
LSM5-204ENST00000409909 POLR3DP05423 398 aaPredicted RBP21.39■■□□□ 1.01
LSM5-204ENST00000409909 PSMC4P43686 418 aa21.39■■□□□ 1.01
LSM5-204ENST00000409909 BACE1P56817 501 aa21.39■■□□□ 1.01
LSM5-204ENST00000409909 MTMR2Q13614 643 aa21.39■■□□□ 1.01
LSM5-204ENST00000409909 OTUD7AQ8TE49 926 aaPredicted RBP21.39■■□□□ 1.01
LSM5-204ENST00000409909 MCM9Q9NXL9 1143 aa21.39■■□□□ 1.01
LSM5-204ENST00000409909 GNRH1P01148 92 aa21.38■■□□□ 1.01
LSM5-204ENST00000409909 GH2P01242 217 aa21.38■■□□□ 1.01
LSM5-204ENST00000409909 SHMT1P34896 483 aa21.38■■□□□ 1.01
LSM5-204ENST00000409909 GABPAQ06546 454 aa21.38■■□□□ 1.01
LSM5-204ENST00000409909 ARMC5Q96C12 935 aa21.38■■□□□ 1.01
LSM5-204ENST00000409909 GPATCH3Q96I76 525 aa21.38■■□□□ 1.01
LSM5-204ENST00000409909 MKI67P46013 3256 aaKnown RBP21.37■■□□□ 1.01
LSM5-204ENST00000409909 CYP2D6P10635 497 aa21.37■■□□□ 1.01
LSM5-204ENST00000409909 CERKLQ49MI3 558 aaPredicted RBP21.37■■□□□ 1.01
LSM5-204ENST00000409909 PUS7LQ9H0K6 701 aaKnown RBP21.37■■□□□ 1.01
LSM5-204ENST00000409909 USP17L10C9JJH3 530 aa21.36■■□□□ 1.01
LSM5-204ENST00000409909 FMNL1O95466 1100 aaPredicted RBP21.36■■□□□ 1.01
LSM5-204ENST00000409909 ZSCAN25Q6NSZ9 544 aa21.36■■□□□ 1.01
LSM5-204ENST00000409909 KBTBD3Q8NAB2 608 aa21.36■■□□□ 1.01
LSM5-204ENST00000409909 SMCR8Q8TEV9 937 aaPredicted RBP21.36■■□□□ 1.01
LSM5-204ENST00000409909 OSBPP22059 807 aa21.35■■□□□ 1.01
LSM5-204ENST00000409909 PI4K2BQ8TCG2 481 aa21.35■■□□□ 1.01
LSM5-204ENST00000409909 ASCC2Q9H1I8 757 aaPredicted RBP21.35■■□□□ 1.01
LSM5-204ENST00000409909 ATP8A2Q9NTI2 1148 aa21.35■■□□□ 1.01
LSM5-204ENST00000409909 SRRDQ9UH36 339 aa21.35■■□□□ 1.01
LSM5-204ENST00000409909 PNMA3Q9UL41 463 aa21.35■■□□□ 1.01
LSM5-204ENST00000409909 BAZ2AQ9UIF9 1905 aaKnown RBP21.35■■□□□ 1.01
LSM5-204ENST00000409909 KIAA0100Q14667 2235 aaKnown RBP21.35■■□□□ 1.01
LSM5-204ENST00000409909 TTC41PQ6P2S7 1318 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 C19orf81C9J6K1 198 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 SMIM22K7EJ46 135 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 GUCY1A2P33402 732 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 HDAC1Q13547 482 aaPredicted RBP21.34■■□□□ 1.01
LSM5-204ENST00000409909 ABCB5Q2M3G0 1257 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 SLC9C1Q4G0N8 1177 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 ANKRD13CQ8N6S4 541 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 ZNF333Q96JL9 665 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 EMILIN3Q9NT22 766 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 MGAMO43451 1857 aa21.34■■□□□ 1.01
LSM5-204ENST00000409909 CYP2D7A0A087X1C5 515 aa21.33■■□□□ 1.01
LSM5-204ENST00000409909 PRMT2P55345 433 aa21.33■■□□□ 1.01
LSM5-204ENST00000409909 FCGRTP55899 365 aa21.33■■□□□ 1.01
LSM5-204ENST00000409909 PABPC4Q13310 644 aaKnown RBP eCLIP21.33■■□□□ 1.017e-10■□□□□ 11.1
LSM5-204ENST00000409909 RAB3GAP1Q15042 981 aa21.33■■□□□ 1.01
LSM5-204ENST00000409909 SLC44A5Q8NCS7 719 aa21.33■■□□□ 1.01
LSM5-204ENST00000409909 SH3TC2Q8TF17 1288 aa21.33■■□□□ 1.01
LSM5-204ENST00000409909 DYNLL2Q96FJ2 89 aa21.33■■□□□ 1.01
LSM5-204ENST00000409909 TMOD4Q9NZQ9 345 aa21.33■■□□□ 1.01
LSM5-204ENST00000409909 SLC4A4Q9Y6R1 1079 aa21.33■■□□□ 1.01
LSM5-204ENST00000409909 SALL3Q9BXA9 1300 aa21.32■■□□□ 1
LSM5-204ENST00000409909 POTEFA5A3E0 1075 aa21.32■■□□□ 1
LSM5-204ENST00000409909 RNF113AO15541 343 aaKnown RBP21.32■■□□□ 1
LSM5-204ENST00000409909 HOXD10P28358 340 aa21.32■■□□□ 1
LSM5-204ENST00000409909 HOXA7P31268 230 aaPredicted RBP21.32■■□□□ 1
LSM5-204ENST00000409909 ANKRD45Q5TZF3 282 aa21.32■■□□□ 1
LSM5-204ENST00000409909 ACER1Q8TDN7 264 aa21.32■■□□□ 1
LSM5-204ENST00000409909 OSBP2Q969R2 916 aa21.32■■□□□ 1
LSM5-204ENST00000409909 STRBPQ96SI9 672 aaKnown RBP21.32■■□□□ 1
LSM5-204ENST00000409909 USP17L12C9JPN9 530 aa21.31■■□□□ 1
LSM5-204ENST00000409909 USP17L21D6R901 530 aa21.31■■□□□ 1
LSM5-204ENST00000409909 MX1P20591 662 aa21.31■■□□□ 1
LSM5-204ENST00000409909 PRKCZQ05513 592 aa21.31■■□□□ 1
LSM5-204ENST00000409909 FAM110CQ1W6H9 321 aa21.31■■□□□ 1
LSM5-204ENST00000409909 C12orf60Q5U649 245 aa21.31■■□□□ 1
LSM5-204ENST00000409909 USP17L2Q6R6M4 530 aa21.31■■□□□ 1
LSM5-204ENST00000409909 NBPF11Q86T75 865 aa21.31■■□□□ 1
LSM5-204ENST00000409909 GCC1Q96CN9 775 aa21.31■■□□□ 1
LSM5-204ENST00000409909 P2RX7Q99572 595 aaKnown RBP21.31■■□□□ 1
LSM5-204ENST00000409909 CABP5Q9NP86 173 aa21.31■■□□□ 1
LSM5-204ENST00000409909 GABRQQ9UN88 632 aa21.31■■□□□ 1
LSM5-204ENST00000409909 MYPNQ86TC9 1320 aa21.3■■□□□ 1
LSM5-204ENST00000409909 ERC2O15083 957 aa21.3■■□□□ 1
LSM5-204ENST00000409909 GLRX3O76003 335 aaKnown RBP21.3■■□□□ 1
LSM5-204ENST00000409909 GCLCP48506 637 aaPredicted RBP21.3■■□□□ 1
LSM5-204ENST00000409909 SEPT2Q15019 361 aa21.3■■□□□ 1
LSM5-204ENST00000409909 CTR9Q6PD62 1173 aa21.3■■□□□ 1
LSM5-204ENST00000409909 DOCK3Q8IZD9 2030 aa21.29■■□□□ 1
LSM5-204ENST00000409909 AAMPQ13685 434 aa21.29■■□□□ 1
LSM5-204ENST00000409909 ZYXQ15942 572 aaKnown RBP21.29■■□□□ 1
LSM5-204ENST00000409909 EXOC6Q8TAG9 804 aa21.29■■□□□ 1
LSM5-204ENST00000409909 RAET1EQ8TD07 263 aa21.29■■□□□ 1
LSM5-204ENST00000409909 APPBP2Q92624 585 aa21.29■■□□□ 1
LSM5-204ENST00000409909 GSG1L2A8MUP6 293 aa21.28■■□□□ 1
LSM5-204ENST00000409909 PEX10O60683 326 aa21.28■■□□□ 1
LSM5-204ENST00000409909 MYCP01106 439 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms