RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 DHX16O60231 1041 aaKnown RBP3.71□□□□□ -1.82
RGPD3-202ENST00000409886 CTDNEP1O95476 244 aa3.71□□□□□ -1.82
RGPD3-202ENST00000409886 CYP19A1P11511 503 aaPredicted RBP3.71□□□□□ -1.82
RGPD3-202ENST00000409886 CASP1P29466 404 aa3.71□□□□□ -1.82
RGPD3-202ENST00000409886 SLC9C1Q4G0N8 1177 aa3.71□□□□□ -1.82
RGPD3-202ENST00000409886 STOX1Q6ZVD7 989 aa3.71□□□□□ -1.82
RGPD3-202ENST00000409886 SLC51AQ86UW1 340 aa3.71□□□□□ -1.82
RGPD3-202ENST00000409886 ALYREFQ86V81 257 aaKnown RBP3.71□□□□□ -1.82
RGPD3-202ENST00000409886 CDCA5Q96FF9 252 aa3.71□□□□□ -1.82
RGPD3-202ENST00000409886 SRRTQ9BXP5 876 aaKnown RBP3.71□□□□□ -1.82
RGPD3-202ENST00000409886 ZSWIM4Q9H7M6 989 aa3.71□□□□□ -1.82
RGPD3-202ENST00000409886 ZNF277Q9NRM2 450 aaPredicted RBP3.71□□□□□ -1.82
RGPD3-202ENST00000409886 ARID1BQ8NFD5 2236 aaPredicted RBP3.71□□□□□ -1.82
RGPD3-202ENST00000409886 AHCTF1Q8WYP5 2266 aa3.71□□□□□ -1.82
RGPD3-202ENST00000409886 PRR33A8MZF0 331 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 POLR3GO15318 223 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 EVX2Q03828 476 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 GRM1Q13255 1194 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 SNW1Q13573 536 aaKnown RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 AMOTQ4VCS5 1084 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 LARP1BQ659C4 914 aaKnown RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 SMIM5Q71RC9 77 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 C10orf67Q8IYJ2 551 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 PRPF38AQ8NAV1 312 aaKnown RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 NLRP3Q96P20 1036 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 ASB2Q96Q27 587 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 PA2G4Q9UQ80 394 aaKnown RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 CACNA1IQ9P0X4 2223 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 KMT2EQ8IZD2 1858 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 WTIPA6NIX2 430 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 EVI5O60447 810 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 PIP4K2AP48426 406 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 MRPS5P82675 430 aaKnown RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 DPCR1Q3MIW9 517 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 FAM43BQ6ZT52 329 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 NUTM1Q86Y26 1132 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 GPIHBP1Q8IV16 184 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 HSCBQ8IWL3 235 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 HELBQ8NG08 1087 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 LRFN3Q9BTN0 628 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 AKAP2Q9Y2D5 859 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 PPP2R3BQ9Y5P8 575 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 NUP98P52948 1817 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 MYO1CO00159 1063 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 SKAP2O75563 359 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 FARP2O94887 1054 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 CDC25AP30304 524 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 ZNF280AP59817 542 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 SLC4A8Q2Y0W8 1093 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 CHST3Q7LGC8 479 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 AMPHP49418 695 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 GMPSP49915 693 aaPredicted RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 NUBP1P53384 320 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 PROSER3Q2NL68 480 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 FAM228AQ86W67 206 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 PNKPQ96T60 521 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 PHACTR2O75167 634 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 MSNP26038 577 aaKnown RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 BCAMP50895 628 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 TCIRG1Q13488 830 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 TRADDQ15628 312 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 UBAP2Q5T6F2 1119 aaKnown RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 NOA1Q8NC60 698 aaKnown RBP3.7□□□□□ -1.82
RGPD3-202ENST00000409886 COG3Q96JB2 828 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 SENP2Q9HC62 589 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 THEGQ9P2T0 379 aa3.7□□□□□ -1.82
RGPD3-202ENST00000409886 DDX11L8A8MPP1 907 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 UBXN2AP68543 259 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 SP3Q02447 781 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 CEBPZQ03701 1054 aaKnown RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 BECN1Q14457 450 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 SPRYD7Q5W111 196 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 RAB11FIP4Q86YS3 637 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 FUT8Q9BYC5 575 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 RWDD1Q9H446 243 aaPredicted RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 NCOA5Q9HCD5 579 aaKnown RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 CIZ1Q9ULV3 898 aaPredicted RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 POLR2AP24928 1970 aaKnown RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 HIRAP54198 1017 aaPredicted RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 AAK1Q2M2I8 961 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 LDLRAD1Q5T700 205 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 KRT26Q7Z3Y9 468 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 FTSJ3Q8IY81 847 aaKnown RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 ANKRD44Q8N8A2 993 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 CDX2Q99626 313 aaPredicted RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 INCENPQ9NQS7 918 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 SNX14Q9Y5W7 946 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 PI4K2BG5E9Z4 385 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 SNAP23O00161 211 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 BACH1O14867 736 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 HOXD10P28358 340 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 IL6STP40189 918 aaPredicted RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 PKN1Q16512 942 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 CCDC83Q8IWF9 413 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 HYPKQ9NX55 129 aa3.69□□□□□ -1.82
RGPD3-202ENST00000409886 CXXC1Q9P0U4 656 aaPredicted RBP3.69□□□□□ -1.82
RGPD3-202ENST00000409886 GJA3Q9Y6H8 435 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms