RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CDKL5O76039 1030 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 DDAH1O94760 285 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 CCDC178Q5BJE1 867 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 MICU3Q86XE3 530 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 NIM1KQ8IY84 436 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 AGBL3Q8NEM8 1001 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 EHD4Q9H223 541 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 IL17RBQ9NRM6 502 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 LMBRD1Q9NUN5 540 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 ATP6V1DQ9Y5K8 247 aa6.45□□□□□ -1.38
EPHA4-202ENST00000409854 GOLGA6L22H0YM25 854 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 CALM1P0DP23 149 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 CALM2P0DP24 149 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 CALM3P0DP25 149 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 IFNAR1P17181 557 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 CDK8P49336 464 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 IFIT1BQ5T764 474 aaKnown RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 TTC6Q86TZ1 520 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 DGKHQ86XP1 1220 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 FAM184AQ8NB25 1140 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 MTMR14Q8NCE2 650 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 CNKSR2Q8WXI2 1034 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 DDX11Q96FC9 970 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 MAP3K14Q99558 947 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 NAP1L2Q9ULW6 460 aaPredicted RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 VPS37CA5D8V6 355 aaPredicted RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 TSPY2A6NKD2 308 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 ADD1P35611 737 aaKnown RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 MMP14P50281 582 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 TROAPQ12815 778 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 RESTQ13127 1097 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 FAM47AQ5JRC9 791 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 MCTP1Q6DN14 999 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 SYNE3Q6ZMZ3 975 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 RAB11FIP4Q86YS3 637 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 MYL10Q9BUA6 226 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 FAM198AQ9UFP1 575 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 SWAP70Q9UH65 585 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 PCDHAC2Q9Y5I4 1007 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 CCDC196A0A1B0GTZ2 297 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 CPLX1O14810 134 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 FMNL1O95466 1100 aaPredicted RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 RXRAP19793 462 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 RBM10P98175 930 aaKnown RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 TFAP4Q01664 338 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 NFIAQ12857 509 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 RTN1Q16799 776 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 CFAP100Q494V2 611 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 FOXD4L5Q5VV16 416 aaPredicted RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 METTL16Q86W50 562 aaKnown RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 FANCBQ8NB91 859 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 SLC44A5Q8NCS7 719 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 NLGN2Q8NFZ4 835 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 NEDD1Q8NHV4 660 aa6.44□□□□□ -1.38
EPHA4-202ENST00000409854 FOXD4L4Q8WXT5 416 aaPredicted RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 ZBED3Q96IU2 234 aaPredicted RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 ORC3Q9UBD5 711 aaPredicted RBP6.44□□□□□ -1.38
EPHA4-202ENST00000409854 IGKV6D-41A0A0C4DH26 115 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 NMT2O60551 498 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 ENTPD3O75355 529 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 RAD17O75943 681 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 FUT2Q10981 343 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 PICALMQ13492 652 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 SKOR2Q2VWA4 1001 aaPredicted RBP6.43□□□□□ -1.38
EPHA4-202ENST00000409854 SLC4A8Q2Y0W8 1093 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 CPLX2Q6PUV4 134 aaKnown RBP6.43□□□□□ -1.38
EPHA4-202ENST00000409854 CHAMP1Q96JM3 812 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 DHX36Q9H2U1 1008 aaKnown RBP6.43□□□□□ -1.38
EPHA4-202ENST00000409854 ZSCAN16Q9H4T2 348 aaPredicted RBP6.43□□□□□ -1.38
EPHA4-202ENST00000409854 MKNK2Q9HBH9 465 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 SPON1Q9HCB6 807 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 RBM28Q9NW13 759 aaKnown RBP6.43□□□□□ -1.38
EPHA4-202ENST00000409854 SPDYE2BA6NHP3 402 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 TRAK2O60296 914 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 SPDYE6P0CI01 402 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 PRELPP51888 382 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 CXCL9Q07325 125 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 CATIPQ7Z7H3 387 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 ZNF444Q8N0Y2 327 aaPredicted RBP6.43□□□□□ -1.38
EPHA4-202ENST00000409854 SERPINB13Q9UIV8 391 aa6.43□□□□□ -1.38
EPHA4-202ENST00000409854 TSPY3P0CV98 308 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 TSPY8P0CW00 308 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 SHMT1P34896 483 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 CRACR2BQ8N4Y2 399 aaPredicted RBP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 FBXO18Q8NFZ0 1043 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 PRMT6Q96LA8 375 aaPredicted RBP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 RNF26Q9BY78 433 aaPredicted RBP6.42□□□□□ -1.38
EPHA4-202ENST00000409854 HDAC9Q9UKV0 1011 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 BCS1LQ9Y276 419 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 H3BQV1 296 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 FZD9O00144 591 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 HLA-DOAP06340 250 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 KLHL40Q2TBA0 621 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 SPDYE2Q495Y8 402 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 IFFO2Q5TF58 517 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 FKBP1CQ5VVH2 108 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 CIAPIN1Q6FI81 312 aa6.42□□□□□ -1.38
EPHA4-202ENST00000409854 SH3BP5LQ7L8J4 393 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms