RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CHRNDQ07001 517 aa27.99■■■□□ 2.07
SPIRE1-202ENST00000409402 KARSQ15046 597 aaKnown RBP27.99■■■□□ 2.07
SPIRE1-202ENST00000409402 CCDC114Q96M63 670 aa27.99■■■□□ 2.07
SPIRE1-202ENST00000409402 NLRP1Q9C000 1473 aa27.99■■■□□ 2.07
SPIRE1-202ENST00000409402 KRT9P35527 623 aa27.99■■■□□ 2.07
SPIRE1-202ENST00000409402 TERF1P54274 439 aa27.99■■■□□ 2.07
SPIRE1-202ENST00000409402 ZNF569Q5MCW4 686 aa27.99■■■□□ 2.07
SPIRE1-202ENST00000409402 ATP8A2Q9NTI2 1148 aa27.99■■■□□ 2.07
SPIRE1-202ENST00000409402 AGTPBP1Q9UPW5 1226 aa27.99■■■□□ 2.07
SPIRE1-202ENST00000409402 SCNN1DP51172 638 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 BCAMP50895 628 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 ARFGAP3Q9NP61 516 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 OTUD7BQ6GQQ9 843 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 MTRF1LQ9UGC7 380 aaKnown RBP27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 OPA1O60313 960 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 MCTP2Q6DN12 878 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 HACE1Q8IYU2 909 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 TNNC1P63316 161 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 OTUD6AQ7L8S5 288 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 PPP1R9BQ96SB3 815 aa27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 KDM5AP29375 1690 aaKnown RBP27.98■■■□□ 2.07
SPIRE1-202ENST00000409402 PAK1Q13153 545 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 RAB3IL1Q8TBN0 382 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 LPXNO60711 386 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 CABP7Q86V35 215 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 GLG1Q92896 1179 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 TRIM37O94972 964 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 SMCO2A6NFE2 343 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 BTDP43251 543 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 TUBB4BP68371 445 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 ARHGEF16Q5VV41 709 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 JAKMIP2Q96AA8 810 aa27.97■■■□□ 2.07
SPIRE1-202ENST00000409402 PPEF1O14829 653 aaPredicted RBP27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 CERKLQ49MI3 558 aaPredicted RBP27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 UGGT1Q9NYU2 1555 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 SPOPO43791 374 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 ZSCAN10Q96SZ4 725 aaPredicted RBP27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 KCNJ14Q9UNX9 436 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 CALCOCO2Q13137 446 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 CSRNP2Q9H175 543 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 ARHGEF5Q12774 1597 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 ASIC2Q16515 512 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 VPS16Q9H269 839 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 MYO5CQ9NQX4 1742 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 SYNRGQ9UMZ2 1314 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 GADL1Q6ZQY3 521 aa27.96■■■□□ 2.07
SPIRE1-202ENST00000409402 GAS7O60861 476 aa27.95■■■□□ 2.07
SPIRE1-202ENST00000409402 CCDC122Q5T0U0 273 aa27.95■■■□□ 2.07
SPIRE1-202ENST00000409402 PNMA2Q9UL42 364 aa27.95■■■□□ 2.07
SPIRE1-202ENST00000409402 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.95■■■□□ 2.076e-9■■■■■ 32.2
SPIRE1-202ENST00000409402 IFNL3Q8IZI9 196 aa27.95■■■□□ 2.07
SPIRE1-202ENST00000409402 ZNF654Q8IZM8 581 aa27.95■■■□□ 2.07
SPIRE1-202ENST00000409402 DYMQ7RTS9 669 aa27.95■■■□□ 2.06
SPIRE1-202ENST00000409402 MLXIPQ9HAP2 919 aa27.95■■■□□ 2.06
SPIRE1-202ENST00000409402 MAPK8IP1Q9UQF2 711 aa27.95■■■□□ 2.06
SPIRE1-202ENST00000409402 ZNF804BA4D1E1 1349 aa27.95■■■□□ 2.06
SPIRE1-202ENST00000409402 EXOC3O60645 756 aa27.95■■■□□ 2.06
SPIRE1-202ENST00000409402 IL6STP40189 918 aaPredicted RBP27.95■■■□□ 2.06
SPIRE1-202ENST00000409402 NT5C3AQ9H0P0 336 aa27.95■■■□□ 2.06
SPIRE1-202ENST00000409402 MRPL44Q9H9J2 332 aaKnown RBP27.95■■■□□ 2.06
SPIRE1-202ENST00000409402 MRPL11Q9Y3B7 192 aaKnown RBP27.95■■■□□ 2.06
SPIRE1-202ENST00000409402 GCNT3O95395 438 aa27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 VPS54Q9P1Q0 977 aa27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 XDHP47989 1333 aa27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 MIER3Q7Z3K6 550 aa27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 BAG1Q99933 345 aaPredicted RBP27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 ADGBQ8N7X0 1667 aa27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 IGSF22Q8N9C0 903 aa27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 USP44Q9H0E7 712 aa27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 SSH3Q8TE77 659 aa27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 METP08581 1390 aa27.94■■■□□ 2.06
SPIRE1-202ENST00000409402 KDM5DQ9BY66 1539 aa27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 ALAS1P13196 640 aa27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 PDE6AP16499 860 aa27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 TTC14Q96N46 770 aa27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 CFAP58Q5T655 872 aa27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 MLKLQ8NB16 471 aa27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 hCG_1642624A0A1W2PR95 340 aa27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 NAP1L3Q99457 506 aaPredicted RBP27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 KRT27Q7Z3Y8 459 aa27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 UIMC1Q96RL1 719 aa27.93■■■□□ 2.06
SPIRE1-202ENST00000409402 TMC4Q7Z404 712 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 TPH2Q8IWU9 490 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 ASAP1Q9ULH1 1129 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 TESPA1A2RU30 521 aaPredicted RBP27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 DAPK3O43293 454 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 BEND3Q5T5X7 828 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 PROCA1Q8NCQ7 364 aaPredicted RBP27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 CFAP65Q6ZU64 1925 aaKnown RBP27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 SEC24BO95487 1268 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 SPOUT1Q5T280 376 aaKnown RBP27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 MCF2L2Q86YR7 1114 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 KDM3AQ9Y4C1 1321 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 KRT19P08727 400 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 ARHGEF25Q86VW2 580 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 TBC1D7Q9P0N9 293 aa27.92■■■□□ 2.06
SPIRE1-202ENST00000409402 MYOM2P54296 1465 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 ICA1Q05084 483 aa27.91■■■□□ 2.06
SPIRE1-202ENST00000409402 INF2Q27J81 1249 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms