RNA–Protein interactions for RNA: ENST00000409022.2

PTPN18-203, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-203ENST00000409022 BCRP11274 1271 aa22.33■■□□□ 1.17
PTPN18-203ENST00000409022 TATDN1Q6P1N9 297 aa22.33■■□□□ 1.17
PTPN18-203ENST00000409022 ARMC5Q96C12 935 aa22.33■■□□□ 1.17
PTPN18-203ENST00000409022 ATP8A2Q9NTI2 1148 aa22.33■■□□□ 1.17
PTPN18-203ENST00000409022 PCDHB15Q9Y5E8 787 aa22.33■■□□□ 1.17
PTPN18-203ENST00000409022 ERC2O15083 957 aa22.32■■□□□ 1.16
PTPN18-203ENST00000409022 GCLCP48506 637 aaPredicted RBP22.32■■□□□ 1.16
PTPN18-203ENST00000409022 MTMR2Q13614 643 aa22.32■■□□□ 1.16
PTPN18-203ENST00000409022 CERKLQ49MI3 558 aaPredicted RBP22.32■■□□□ 1.16
PTPN18-203ENST00000409022 PTCH2Q9Y6C5 1203 aa22.32■■□□□ 1.16
PTPN18-203ENST00000409022 MBD4O95243 580 aa22.31■■□□□ 1.16
PTPN18-203ENST00000409022 TREML2Q5T2D2 321 aa22.31■■□□□ 1.16
PTPN18-203ENST00000409022 LCORLQ8N3X6 602 aa22.31■■□□□ 1.16
PTPN18-203ENST00000409022 CRBNQ96SW2 442 aa22.31■■□□□ 1.16
PTPN18-203ENST00000409022 TMEM106CQ9BVX2 250 aa22.31■■□□□ 1.16
PTPN18-203ENST00000409022 ARHGAP39Q9C0H5 1083 aa22.31■■□□□ 1.16
PTPN18-203ENST00000409022 ARMT1Q9H993 441 aa22.31■■□□□ 1.16
PTPN18-203ENST00000409022 TTC41PQ6P2S7 1318 aa22.31■■□□□ 1.16
PTPN18-203ENST00000409022 GH2P01242 217 aa22.3■■□□□ 1.16
PTPN18-203ENST00000409022 IRX3P78415 501 aaPredicted RBP22.3■■□□□ 1.16
PTPN18-203ENST00000409022 ABCB5Q2M3G0 1257 aa22.3■■□□□ 1.16
PTPN18-203ENST00000409022 RAET1EQ8TD07 263 aa22.3■■□□□ 1.16
PTPN18-203ENST00000409022 FEZ1Q99689 392 aa22.3■■□□□ 1.16
PTPN18-203ENST00000409022 DCP1AQ9NPI6 582 aaPredicted RBP22.3■■□□□ 1.16
PTPN18-203ENST00000409022 SRRDQ9UH36 339 aa22.3■■□□□ 1.16
PTPN18-203ENST00000409022 SWAP70Q9UH65 585 aa22.3■■□□□ 1.16
PTPN18-203ENST00000409022 ZFYP08048 801 aaPredicted RBP22.29■■□□□ 1.16
PTPN18-203ENST00000409022 PLCD1P51178 756 aa22.29■■□□□ 1.16
PTPN18-203ENST00000409022 USP14P54578 494 aa22.29■■□□□ 1.16
PTPN18-203ENST00000409022 USP17L2Q6R6M4 530 aa22.29■■□□□ 1.16
PTPN18-203ENST00000409022 KBTBD3Q8NAB2 608 aa22.29■■□□□ 1.16
PTPN18-203ENST00000409022 SDR42E1Q8WUS8 393 aa22.29■■□□□ 1.16
PTPN18-203ENST00000409022 TRIM47Q96LD4 638 aa22.29■■□□□ 1.16
PTPN18-203ENST00000409022 MYO5AQ9Y4I1 1855 aaKnown RBP22.28■■□□□ 1.16
PTPN18-203ENST00000409022 CAP1Q01518 475 aa22.28■■□□□ 1.16
PTPN18-203ENST00000409022 RAB3GAP1Q15042 981 aa22.28■■□□□ 1.16
PTPN18-203ENST00000409022 FAM110CQ1W6H9 321 aa22.28■■□□□ 1.16
PTPN18-203ENST00000409022 GCC1Q96CN9 775 aa22.28■■□□□ 1.16
PTPN18-203ENST00000409022 FOCADQ5VW36 1801 aa22.28■■□□□ 1.16
PTPN18-203ENST00000409022 MYPNQ86TC9 1320 aa22.28■■□□□ 1.16
PTPN18-203ENST00000409022 GLRX3O76003 335 aaKnown RBP22.27■■□□□ 1.16
PTPN18-203ENST00000409022 ECM2O94769 699 aaPredicted RBP22.27■■□□□ 1.16
PTPN18-203ENST00000409022 HOXA7P31268 230 aaPredicted RBP22.27■■□□□ 1.16
PTPN18-203ENST00000409022 ANKRD13CQ8N6S4 541 aa22.27■■□□□ 1.16
PTPN18-203ENST00000409022 GTF3C2Q8WUA4 911 aaPredicted RBP22.27■■□□□ 1.16
PTPN18-203ENST00000409022 ZNF333Q96JL9 665 aa22.27■■□□□ 1.16
PTPN18-203ENST00000409022 ASCC2Q9H1I8 757 aaPredicted RBP22.27■■□□□ 1.16
PTPN18-203ENST00000409022 TNPO2O14787 897 aaKnown RBP22.26■■□□□ 1.15
PTPN18-203ENST00000409022 SHMT1P34896 483 aa22.26■■□□□ 1.15
PTPN18-203ENST00000409022 JAG1P78504 1218 aa22.26■■□□□ 1.15
PTPN18-203ENST00000409022 COA7Q96BR5 231 aa22.26■■□□□ 1.15
PTPN18-203ENST00000409022 SLC4A4Q9Y6R1 1079 aa22.26■■□□□ 1.15
PTPN18-203ENST00000409022 MPHOSPH10O00566 681 aaKnown RBP22.25■■□□□ 1.15
PTPN18-203ENST00000409022 GABPAQ06546 454 aa22.25■■□□□ 1.15
PTPN18-203ENST00000409022 HDAC1Q13547 482 aaPredicted RBP22.25■■□□□ 1.15
PTPN18-203ENST00000409022 RNF113AO15541 343 aaKnown RBP22.24■■□□□ 1.15
PTPN18-203ENST00000409022 MX1P20591 662 aa22.24■■□□□ 1.15
PTPN18-203ENST00000409022 APPBP2Q92624 585 aa22.24■■□□□ 1.15
PTPN18-203ENST00000409022 SIPA1L1O43166 1804 aa22.24■■□□□ 1.15
PTPN18-203ENST00000409022 PHIPQ8WWQ0 1821 aa22.24■■□□□ 1.15
PTPN18-203ENST00000409022 CDK5RAP2Q96SN8 1893 aa22.24■■□□□ 1.15
PTPN18-203ENST00000409022 PRKAB2O43741 272 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 GNAT2P19087 354 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 CTGFP29279 349 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 GRK4P32298 578 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 UBXN2AP68543 259 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 ANKRD45Q5TZF3 282 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 TSHZ3Q63HK5 1081 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 TMEM179Q6ZVK1 233 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 SLAIN1Q8ND83 568 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 C12orf42Q96LP6 360 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 KIAA1683Q9H0B3 1180 aa22.23■■□□□ 1.15
PTPN18-203ENST00000409022 PUS7LQ9H0K6 701 aaKnown RBP22.23■■□□□ 1.15
PTPN18-203ENST00000409022 ARPP21Q9UBL0 812 aaPredicted RBP22.23■■□□□ 1.15
PTPN18-203ENST00000409022 MYH1P12882 1939 aa22.22■■□□□ 1.15
PTPN18-203ENST00000409022 PRKCZQ05513 592 aa22.22■■□□□ 1.15
PTPN18-203ENST00000409022 SHROOM1Q2M3G4 852 aaPredicted RBP22.22■■□□□ 1.15
PTPN18-203ENST00000409022 SLFNL1Q499Z3 407 aa22.22■■□□□ 1.15
PTPN18-203ENST00000409022 SH3TC2Q8TF17 1288 aa22.22■■□□□ 1.15
PTPN18-203ENST00000409022 CCDC17Q96LX7 622 aa22.22■■□□□ 1.15
PTPN18-203ENST00000409022 BIN2Q9UBW5 565 aaPredicted RBP22.22■■□□□ 1.15
PTPN18-203ENST00000409022 ATAD5Q96QE3 1844 aa22.22■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L15C9J2P7 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L13C9JLJ4 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L12C9JPN9 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L11C9JVI0 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L21D6R901 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L18D6R9N7 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L22D6RA61 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L17D6RBQ6 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L19D6RCP7 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L20D6RJB6 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 HERVK_113P62684 666 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 USP17L24Q0WX57 530 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 C12orf60Q5U649 245 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 GIMAP6Q6P9H5 292 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 CCAR1Q8IX12 1150 aaKnown RBP22.21■■□□□ 1.15
PTPN18-203ENST00000409022 RWDD1Q9H446 243 aaPredicted RBP22.21■■□□□ 1.15
PTPN18-203ENST00000409022 SH2D4AQ9H788 454 aa22.21■■□□□ 1.15
PTPN18-203ENST00000409022 EMILIN3Q9NT22 766 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms