RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 REXO2Q9Y3B8 237 aaKnown RBP0.03□□□□□ -2.4
MIR548F3-201ENST00000408509 SPATA31A6Q5VVP1 1343 aa0.03□□□□□ -2.4
MIR548F3-201ENST00000408509 FBN3Q75N90 2809 aa0.03□□□□□ -2.41
MIR548F3-201ENST00000408509 COL4A4P53420 1690 aaPredicted RBP0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 TMEM191CA6NGB0 347 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 DLGAP3O95886 979 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 IGKV2-30P06310 120 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 RARAP10276 462 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 ADH5P11766 374 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 TARSP26639 723 aaKnown RBP0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 ARID4AP29374 1257 aaPredicted RBP0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 TUBA3CQ13748 450 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 NKPD1Q17RQ9 610 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 TUBA3EQ6PEY2 450 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 SIRT2Q8IXJ6 389 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 ZNF295-AS1Q8N0V1 137 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 LILRA2Q8N149 483 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 NR4A3Q92570 626 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 NSUN5Q96P11 429 aaKnown RBP0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 ZMYND15Q9H091 742 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 SP110Q9HB58 689 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 ZNF358Q9NW07 568 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 GPR160Q9UJ42 338 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 LRFN2Q9ULH4 789 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 USP20Q9Y2K6 914 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 ARIH1Q9Y4X5 557 aaPredicted RBP0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 COX11Q9Y6N1 276 aa0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 EML1O00423 815 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 ZBTB7BO15156 539 aaPredicted RBP0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 TADA3O75528 432 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 CGAP01215 116 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 GCP02774 474 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 ASPAP45381 313 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 CLCN7P51798 805 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 KIAA1161Q6NSJ0 714 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 ZNF761Q86XN6 746 aaPredicted RBP0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 RBMXL3Q8N7X1 1067 aaKnown RBP0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 ZNF280CQ8ND82 737 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 FNIP1Q8TF40 1166 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 RSAD1Q9HA92 442 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 PROCRQ9UNN8 238 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 USP3Q9Y6I4 520 aa0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 SETD1BQ9UPS6 1966 aaKnown RBP0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 SH3D21A4FU49 640 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 LAMTOR5O43504 91 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 NTN1O95631 604 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 MYCP01106 439 aaPredicted RBP0□□□□□ -2.41
MIR548F3-201ENST00000408509 PLA2G1BP04054 148 aaKnown RBP0□□□□□ -2.41
MIR548F3-201ENST00000408509 FOXG1P55316 489 aaPredicted RBP0□□□□□ -2.41
MIR548F3-201ENST00000408509 FOXF2Q12947 444 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 RAPGEF1Q13905 1077 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 EXOSC6Q5RKV6 272 aaKnown RBP0□□□□□ -2.41
MIR548F3-201ENST00000408509 GFI1BQ5VTD9 330 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 CEP135Q66GS9 1140 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 ZNF425Q6IV72 752 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 ADAMTSL4Q6UY14 1074 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 Q7L0L9 218 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 SAPCD2Q86UD0 394 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 RPUSD2Q8IZ73 545 aaKnown RBP0□□□□□ -2.41
MIR548F3-201ENST00000408509 C7orf43Q8WVR3 580 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 HEXIM2Q96MH2 286 aaKnown RBP0□□□□□ -2.41
MIR548F3-201ENST00000408509 HSPA12BQ96MM6 686 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 ADOQ96SZ5 270 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 QTRT2Q9H974 415 aaKnown RBP0□□□□□ -2.41
MIR548F3-201ENST00000408509 GPSM3Q9Y4H4 160 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 PCDHAC2Q9Y5I4 1007 aa0□□□□□ -2.41
MIR548F3-201ENST00000408509 TP53BP1Q12888 1972 aaPredicted RBP-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 PATE3B3GLJ2 98 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 HRKO00198 91 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 SMAD6O43541 496 aaKnown RBP-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 SASH3O75995 380 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 SDHBP21912 280 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 PIP4K2BP78356 416 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 MDM2Q00987 491 aaPredicted RBP-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 CYB5RLQ6IPT4 315 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 CCDC125Q86Z20 511 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 Q8TCH9 128 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 SPIRE2Q8WWL2 714 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 ANKS1AQ92625 1134 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 IFT43Q96FT9 208 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 DUSP23Q9BVJ7 150 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 R3HDMLQ9H3Y0 253 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 SLAIN2Q9P270 581 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 ANKIB1Q9P2G1 1089 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 PCDHB15Q9Y5E8 787 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 PCDHA5Q9Y5H7 936 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 GPC6Q9Y625 555 aaPredicted RBP-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 PMF1-BGLAPU3KQ54 211 aa-0.01□□□□□ -2.41
MIR548F3-201ENST00000408509 IGKV2D-30A0A075B6S6 120 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 FAM177BA6PVY3 158 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 KIAA0355O15063 1070 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 CCKARP32238 428 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 MCAMP43121 646 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 HNRNPKP61978 463 aaKnown RBP eCLIP-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 E2F4Q16254 413 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 HS1BP3Q53T59 392 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 RNF20Q5VTR2 975 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 CDKAL1Q5VV42 579 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 BORAQ6PGQ7 559 aa-0.02□□□□□ -2.41
MIR548F3-201ENST00000408509 C1orf210Q8IVY1 113 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms