RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.64
COL23A1-202ENST00000407622 BAZ2AQ9UIF9 1905 aaKnown RBP19.02■□□□□ 0.64
COL23A1-202ENST00000407622 hCG_1642624A0A1W2PR95 340 aa19.02■□□□□ 0.64
COL23A1-202ENST00000407622 ERICH2A1L162 156 aa19.02■□□□□ 0.64
COL23A1-202ENST00000407622 PTPREP23469 700 aa19.02■□□□□ 0.64
COL23A1-202ENST00000407622 SAFBQ15424 915 aaKnown RBP eCLIP19.02■□□□□ 0.64
COL23A1-202ENST00000407622 ZNF827Q17R98 1081 aa19.02■□□□□ 0.64
COL23A1-202ENST00000407622 PARP10Q53GL7 1025 aa19.02■□□□□ 0.64
COL23A1-202ENST00000407622 FAM182BQ5T319 152 aa19.02■□□□□ 0.64
COL23A1-202ENST00000407622 SMAP1Q8IYB5 467 aaPredicted RBP19.02■□□□□ 0.64
COL23A1-202ENST00000407622 INTS13Q9NVM9 706 aa19.02■□□□□ 0.64
COL23A1-202ENST00000407622 TNKSO95271 1327 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 POLR2DO15514 142 aaKnown RBP19.01■□□□□ 0.63
COL23A1-202ENST00000407622 DEXIO95424 95 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 SEC23AQ15436 765 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 CFAP100Q494V2 611 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 KIF18AQ8NI77 898 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 FOXP1Q9H334 677 aaPredicted RBP19.01■□□□□ 0.63
COL23A1-202ENST00000407622 SERTAD1Q9UHV2 236 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 MAN1B1Q9UKM7 699 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 PDILTQ8N807 584 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 RAI14Q9P0K7 980 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 LAMB2P55268 1798 aa19.01■□□□□ 0.63
COL23A1-202ENST00000407622 RTL9Q8NET4 1388 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 DYNLL1P63167 89 aaKnown RBP19■□□□□ 0.63
COL23A1-202ENST00000407622 EVX2Q03828 476 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 FMR1Q06787 632 aaKnown RBP eCLIP19■□□□□ 0.63
COL23A1-202ENST00000407622 SYT10Q6XYQ8 523 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 SEPT12Q8IYM1 358 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 UBAC1Q9BSL1 405 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 CABP5Q9NP86 173 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 CACNA1SQ13698 1873 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 POSTNQ15063 836 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 RILPL1Q5EBL4 403 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 EARS2Q5JPH6 523 aaKnown RBP19■□□□□ 0.63
COL23A1-202ENST00000407622 VSTM4Q8IW00 320 aa19■□□□□ 0.63
COL23A1-202ENST00000407622 RREB1Q92766 1687 aa18.99■□□□□ 0.63
COL23A1-202ENST00000407622 ZNF804BA4D1E1 1349 aa18.99■□□□□ 0.63
COL23A1-202ENST00000407622 MAGEB6P1A0A0J9YX57 407 aa18.99■□□□□ 0.63
COL23A1-202ENST00000407622 PSDA5PKW4 1024 aaPredicted RBP18.99■□□□□ 0.63
COL23A1-202ENST00000407622 PRDM1O75626 825 aa18.99■□□□□ 0.63
COL23A1-202ENST00000407622 LRRN4CLQ8ND94 238 aa18.99■□□□□ 0.63
COL23A1-202ENST00000407622 ZNF384Q8TF68 577 aa18.99■□□□□ 0.63
COL23A1-202ENST00000407622 RIOK1Q9BRS2 568 aaKnown RBP18.99■□□□□ 0.63
COL23A1-202ENST00000407622 RNF41Q9H4P4 317 aaPredicted RBP18.99■□□□□ 0.63
COL23A1-202ENST00000407622 VPS54Q9P1Q0 977 aa18.99■□□□□ 0.63
COL23A1-202ENST00000407622 TRMT44Q8IYL2 757 aaKnown RBP18.99■□□□□ 0.63
COL23A1-202ENST00000407622 ENAHQ8N8S7 591 aaPredicted RBP18.99■□□□□ 0.63
COL23A1-202ENST00000407622 A0A1B0GUL6 1792 aa18.98■□□□□ 0.63
COL23A1-202ENST00000407622 WNT7AO00755 349 aa18.98■□□□□ 0.63
COL23A1-202ENST00000407622 ZSCAN20P17040 1043 aaPredicted RBP18.98■□□□□ 0.63
COL23A1-202ENST00000407622 ELF2Q15723 593 aa18.98■□□□□ 0.63
COL23A1-202ENST00000407622 PKN1Q16512 942 aa18.98■□□□□ 0.63
COL23A1-202ENST00000407622 ERFEQ4G0M1 354 aa18.98■□□□□ 0.63
COL23A1-202ENST00000407622 MED15Q96RN5 788 aa18.98■□□□□ 0.63
COL23A1-202ENST00000407622 CSRNP2Q9H175 543 aa18.98■□□□□ 0.63
COL23A1-202ENST00000407622 CCDC196A0A1B0GTZ2 297 aa18.97■□□□□ 0.63
COL23A1-202ENST00000407622 KCNJ6P48051 423 aa18.97■□□□□ 0.63
COL23A1-202ENST00000407622 SMIM5Q71RC9 77 aa18.97■□□□□ 0.63
COL23A1-202ENST00000407622 TMTC2Q8N394 836 aa18.97■□□□□ 0.63
COL23A1-202ENST00000407622 CBFA2T2O43439 604 aa18.97■□□□□ 0.63
COL23A1-202ENST00000407622 ACTN4O43707 911 aaKnown RBP18.97■□□□□ 0.63
COL23A1-202ENST00000407622 PLEKHA8P1O95397 391 aa18.97■□□□□ 0.63
COL23A1-202ENST00000407622 NOM1Q5C9Z4 860 aaKnown RBP18.97■□□□□ 0.63
COL23A1-202ENST00000407622 ESR2Q92731 530 aa18.97■□□□□ 0.63
COL23A1-202ENST00000407622 TMX1Q9H3N1 280 aa18.97■□□□□ 0.63
COL23A1-202ENST00000407622 ANAPC4Q9UJX5 808 aa18.97■□□□□ 0.63
COL23A1-202ENST00000407622 SRPRBQ9Y5M8 271 aaKnown RBP18.97■□□□□ 0.63
COL23A1-202ENST00000407622 BAZ2BQ9UIF8 2168 aaKnown RBP18.97■□□□□ 0.63
COL23A1-202ENST00000407622 DUOX1Q9NRD9 1551 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 A0A087X0B3 334 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 SARSP49591 514 aaKnown RBP18.96■□□□□ 0.63
COL23A1-202ENST00000407622 FUT2Q10981 343 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 MTA3Q9BTC8 594 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 CGNQ9P2M7 1197 aaKnown RBP18.96■□□□□ 0.63
COL23A1-202ENST00000407622 CASZ1Q86V15 1759 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 KIF2AO00139 706 aaPredicted RBP18.96■□□□□ 0.63
COL23A1-202ENST00000407622 FANCGO15287 622 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 TOP1P11387 765 aaKnown RBP18.96■□□□□ 0.63
COL23A1-202ENST00000407622 KCNQ4P56696 695 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 MORC3Q14149 939 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 KMT5BQ4FZB7 885 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 NT5DC1Q5TFE4 455 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 ERO1AQ96HE7 468 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 NFE2L3Q9Y4A8 694 aa18.96■□□□□ 0.63
COL23A1-202ENST00000407622 NPHP1O15259 732 aa18.95■□□□□ 0.62
COL23A1-202ENST00000407622 SLU7O95391 586 aaKnown RBP18.95■□□□□ 0.62
COL23A1-202ENST00000407622 KLRK1P26718 216 aa18.95■□□□□ 0.62
COL23A1-202ENST00000407622 RCAN1P53805 252 aa18.95■□□□□ 0.62
COL23A1-202ENST00000407622 TMEM139Q8IV31 216 aa18.95■□□□□ 0.62
COL23A1-202ENST00000407622 ELOA2Q8IYF1 753 aaPredicted RBP18.95■□□□□ 0.62
COL23A1-202ENST00000407622 ZSCAN10Q96SZ4 725 aaPredicted RBP18.95■□□□□ 0.62
COL23A1-202ENST00000407622 CDC5LQ99459 802 aaKnown RBP18.95■□□□□ 0.62
COL23A1-202ENST00000407622 RNF26Q9BY78 433 aaPredicted RBP18.95■□□□□ 0.62
COL23A1-202ENST00000407622 PRDM4Q9UKN5 801 aa18.95■□□□□ 0.62
COL23A1-202ENST00000407622 ANKRD18AQ8IVF6 992 aa18.95■□□□□ 0.62
COL23A1-202ENST00000407622 SMARCE1Q969G3 411 aa18.95■□□□□ 0.62
COL23A1-202ENST00000407622 EPSTI1Q96J88 318 aa18.95■□□□□ 0.62
COL23A1-202ENST00000407622 L2HGDHQ9H9P8 463 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms