RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 DOCK3Q8IZD9 2030 aa23.39■■□□□ 1.34
SMARCB1-204ENST00000407422 NAV1Q8NEY1 1877 aa23.39■■□□□ 1.33
SMARCB1-204ENST00000407422 PRMT2P55345 433 aa23.39■■□□□ 1.33
SMARCB1-204ENST00000407422 MTMR2Q13614 643 aa23.39■■□□□ 1.33
SMARCB1-204ENST00000407422 SLFNL1Q499Z3 407 aa23.39■■□□□ 1.33
SMARCB1-204ENST00000407422 WDR18Q9BV38 432 aa23.39■■□□□ 1.33
SMARCB1-204ENST00000407422 ZBTB21Q9ULJ3 1066 aa23.39■■□□□ 1.33
SMARCB1-204ENST00000407422 SH3D19Q5HYK7 790 aa23.38■■□□□ 1.33
SMARCB1-204ENST00000407422 HAUS7Q99871 368 aa23.38■■□□□ 1.33
SMARCB1-204ENST00000407422 MYPNQ86TC9 1320 aa23.38■■□□□ 1.33
SMARCB1-204ENST00000407422 EN2P19622 333 aaPredicted RBP23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 FCGRTP55899 365 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 BACE1P56817 501 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 ANKRD13CQ8N6S4 541 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 SERPINB13Q9UIV8 391 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 MYH7P12883 1935 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 CHGBP05060 677 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 HOXD10P28358 340 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 PLCD1P51178 756 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 EVX2Q03828 476 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 PRKCZQ05513 592 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 LCORLQ8N3X6 602 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 EHD4Q9H223 541 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 PNMA3Q9UL41 463 aa23.37■■□□□ 1.33
SMARCB1-204ENST00000407422 GH2P01242 217 aa23.36■■□□□ 1.33
SMARCB1-204ENST00000407422 TATDN1Q6P1N9 297 aa23.36■■□□□ 1.33
SMARCB1-204ENST00000407422 TTC6Q86TZ1 520 aa23.36■■□□□ 1.33
SMARCB1-204ENST00000407422 CRNKL1Q9BZJ0 848 aaKnown RBP23.36■■□□□ 1.33
SMARCB1-204ENST00000407422 DCTPP1Q9H773 170 aa23.36■■□□□ 1.33
SMARCB1-204ENST00000407422 RAET1EQ8TD07 263 aa23.35■■□□□ 1.33
SMARCB1-204ENST00000407422 SDR42E1Q8WUS8 393 aa23.35■■□□□ 1.33
SMARCB1-204ENST00000407422 TMEM106CQ9BVX2 250 aa23.35■■□□□ 1.33
SMARCB1-204ENST00000407422 ASCC2Q9H1I8 757 aaPredicted RBP23.35■■□□□ 1.33
SMARCB1-204ENST00000407422 GINM1Q9NU53 330 aa23.35■■□□□ 1.33
SMARCB1-204ENST00000407422 GABRQQ9UN88 632 aa23.35■■□□□ 1.33
SMARCB1-204ENST00000407422 ADD2P35612 726 aa23.34■■□□□ 1.33
SMARCB1-204ENST00000407422 ARMT1Q9H993 441 aa23.34■■□□□ 1.33
SMARCB1-204ENST00000407422 USP17L10C9JJH3 530 aa23.33■■□□□ 1.33
SMARCB1-204ENST00000407422 POLR3DP05423 398 aaPredicted RBP23.33■■□□□ 1.33
SMARCB1-204ENST00000407422 PABPC4Q13310 644 aaKnown RBP eCLIP23.33■■□□□ 1.33
SMARCB1-204ENST00000407422 MCM9Q9NXL9 1143 aa23.33■■□□□ 1.33
SMARCB1-204ENST00000407422 TMOD4Q9NZQ9 345 aa23.33■■□□□ 1.33
SMARCB1-204ENST00000407422 PCDHB15Q9Y5E8 787 aa23.33■■□□□ 1.33
SMARCB1-204ENST00000407422 BAZ2AQ9UIF9 1905 aaKnown RBP23.33■■□□□ 1.33
SMARCB1-204ENST00000407422 SHMT1P34896 483 aa23.33■■□□□ 1.32
SMARCB1-204ENST00000407422 DCP1AQ9NPI6 582 aaPredicted RBP23.33■■□□□ 1.32
SMARCB1-204ENST00000407422 C19orf81C9J6K1 198 aa23.32■■□□□ 1.32
SMARCB1-204ENST00000407422 PRKAB2O43741 272 aa23.32■■□□□ 1.32
SMARCB1-204ENST00000407422 GRK4P32298 578 aa23.32■■□□□ 1.32
SMARCB1-204ENST00000407422 MTFR1Q15390 333 aa23.32■■□□□ 1.32
SMARCB1-204ENST00000407422 FAM110CQ1W6H9 321 aa23.32■■□□□ 1.32
SMARCB1-204ENST00000407422 CERKLQ49MI3 558 aaPredicted RBP23.32■■□□□ 1.32
SMARCB1-204ENST00000407422 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.32■■□□□ 1.32
SMARCB1-204ENST00000407422 TNPO2O14787 897 aaKnown RBP23.31■■□□□ 1.32
SMARCB1-204ENST00000407422 MBD4O95243 580 aa23.31■■□□□ 1.32
SMARCB1-204ENST00000407422 RRP1P56182 461 aaKnown RBP23.31■■□□□ 1.32
SMARCB1-204ENST00000407422 GABPAQ06546 454 aa23.31■■□□□ 1.32
SMARCB1-204ENST00000407422 TSHZ3Q63HK5 1081 aa23.31■■□□□ 1.32
SMARCB1-204ENST00000407422 YTHDC1Q96MU7 727 aaKnown RBP23.31■■□□□ 1.32
SMARCB1-204ENST00000407422 EMILIN3Q9NT22 766 aa23.31■■□□□ 1.32
SMARCB1-204ENST00000407422 ECHDC1Q9NTX5 307 aa23.31■■□□□ 1.32
SMARCB1-204ENST00000407422 CYP2D6P10635 497 aa23.3■■□□□ 1.32
SMARCB1-204ENST00000407422 GCLCP48506 637 aaPredicted RBP23.3■■□□□ 1.32
SMARCB1-204ENST00000407422 FLT3LGP49771 235 aa23.3■■□□□ 1.32
SMARCB1-204ENST00000407422 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
SMARCB1-204ENST00000407422 ABCB5Q2M3G0 1257 aa23.3■■□□□ 1.32
SMARCB1-204ENST00000407422 PEX10O60683 326 aa23.3■■□□□ 1.32
SMARCB1-204ENST00000407422 HOXA7P31268 230 aaPredicted RBP23.3■■□□□ 1.32
SMARCB1-204ENST00000407422 IRX3P78415 501 aaPredicted RBP23.3■■□□□ 1.32
SMARCB1-204ENST00000407422 P2RX7Q99572 595 aaKnown RBP23.3■■□□□ 1.32
SMARCB1-204ENST00000407422 ZYXQ15942 572 aaKnown RBP23.29■■□□□ 1.32
SMARCB1-204ENST00000407422 UBE3CQ15386 1083 aa23.28■■□□□ 1.32
SMARCB1-204ENST00000407422 ACER1Q8TDN7 264 aa23.28■■□□□ 1.32
SMARCB1-204ENST00000407422 BIN2Q9UBW5 565 aaPredicted RBP23.28■■□□□ 1.32
SMARCB1-204ENST00000407422 MYH8P13535 1937 aa23.28■■□□□ 1.32
SMARCB1-204ENST00000407422 GUCY1A2P33402 732 aa23.27■■□□□ 1.32
SMARCB1-204ENST00000407422 USP17L2Q6R6M4 530 aa23.27■■□□□ 1.32
SMARCB1-204ENST00000407422 SLC44A5Q8NCS7 719 aa23.27■■□□□ 1.32
SMARCB1-204ENST00000407422 FEZ1Q99689 392 aa23.27■■□□□ 1.32
SMARCB1-204ENST00000407422 SMIM22K7EJ46 135 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 ADCY3O60266 1144 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 ELNP15502 786 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 HERVK_113P62684 666 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 SLAIN1Q8ND83 568 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 COA7Q96BR5 231 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 DYNLL2Q96FJ2 89 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 PUS7LQ9H0K6 701 aaKnown RBP23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 TXNRD2Q9NNW7 524 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 CABP5Q9NP86 173 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 ATP8A2Q9NTI2 1148 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 MORF4L1Q9UBU8 362 aa23.26■■□□□ 1.31
SMARCB1-204ENST00000407422 CYP2D7A0A087X1C5 515 aa23.25■■□□□ 1.31
SMARCB1-204ENST00000407422 CCL5P13501 91 aa23.25■■□□□ 1.31
SMARCB1-204ENST00000407422 SEPT2Q15019 361 aa23.25■■□□□ 1.31
SMARCB1-204ENST00000407422 PRPF38BQ5VTL8 546 aaKnown RBP23.25■■□□□ 1.31
SMARCB1-204ENST00000407422 ZSCAN25Q6NSZ9 544 aa23.25■■□□□ 1.31
SMARCB1-204ENST00000407422 POTEEQ6S8J3 1075 aa23.25■■□□□ 1.31
SMARCB1-204ENST00000407422 C12orf42Q96LP6 360 aa23.25■■□□□ 1.31
SMARCB1-204ENST00000407422 CRBNQ96SW2 442 aa23.25■■□□□ 1.31
SMARCB1-204ENST00000407422 TAOK2Q9UL54 1235 aa23.25■■□□□ 1.31
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