RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 UQCRFS1P1P0C7P4 283 aa15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 ZKSCAN1P17029 563 aaPredicted RBP15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 SYN1P17600 705 aa15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 TRIM32Q13049 653 aa15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 MTMR2Q13614 643 aa15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 FOXP4Q8IVH2 680 aaPredicted RBP15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 TRMT2AQ8IZ69 625 aaKnown RBP15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 ZNF384Q8TF68 577 aa15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 TRIB2Q92519 343 aa15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 P2RX7Q99572 595 aaKnown RBP15.11■□□□□ 0.01
APOBEC3B-204ENST00000407298 ALPK3Q96L96 1907 aa15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 IGSF3O75054 1194 aa15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 ARID4AP29374 1257 aaPredicted RBP15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 RGS2P41220 211 aa15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 HERVK_113P62684 666 aa15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 MTX1Q13505 466 aa15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 ATF7IPQ6VMQ6 1270 aa15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 TBC1D9Q6ZT07 1266 aa15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 CRACR2BQ8N4Y2 399 aaPredicted RBP15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 MEIS3Q99687 375 aa15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
APOBEC3B-204ENST00000407298 GLRX3O76003 335 aaKnown RBP15.09■□□□□ 0.01
APOBEC3B-204ENST00000407298 G3BP1Q13283 466 aaKnown RBP eCLIP15.09■□□□□ 0.01
APOBEC3B-204ENST00000407298 NAA16Q6N069 864 aaPredicted RBP15.09■□□□□ 0.01
APOBEC3B-204ENST00000407298 ARHGAP45Q92619 1136 aa15.09■□□□□ 0.01
APOBEC3B-204ENST00000407298 MTMR10Q9NXD2 777 aa15.09■□□□□ 0.01
APOBEC3B-204ENST00000407298 HLA-DOAP06340 250 aa15.08■□□□□ 0
APOBEC3B-204ENST00000407298 PPP4CP60510 307 aa15.08■□□□□ 0
APOBEC3B-204ENST00000407298 ERVK-9P63128 1117 aa15.08■□□□□ 0
APOBEC3B-204ENST00000407298 ERVK-24P63145 666 aa15.08■□□□□ 0
APOBEC3B-204ENST00000407298 CCNA1P78396 465 aa15.08■□□□□ 0
APOBEC3B-204ENST00000407298 CACNB2Q08289 660 aaPredicted RBP15.08■□□□□ 0
APOBEC3B-204ENST00000407298 RRP1BQ14684 758 aaKnown RBP15.08■□□□□ 0
APOBEC3B-204ENST00000407298 PLEKHH3Q7Z736 793 aa15.08■□□□□ 0
APOBEC3B-204ENST00000407298 METTL16Q86W50 562 aaKnown RBP15.08■□□□□ 0
APOBEC3B-204ENST00000407298 SH3RF3Q8TEJ3 882 aaPredicted RBP15.08■□□□□ 0
APOBEC3B-204ENST00000407298 DDX60LQ5H9U9 1706 aaKnown RBP15.07■□□□□ 0
APOBEC3B-204ENST00000407298 COL6A1P12109 1028 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 USP17L2Q6R6M4 530 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 PI16Q6UXB8 463 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 Q7L0L9 218 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 GPR142Q7Z601 462 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 USP6NLQ92738 828 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 APBA2Q99767 749 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 LBHD1Q9BQE6 289 aaPredicted RBP15.07■□□□□ 0
APOBEC3B-204ENST00000407298 TXNRD2Q9NNW7 524 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 AATFQ9NY61 560 aaKnown RBP eCLIP15.07■□□□□ 0
APOBEC3B-204ENST00000407298 RBPJLQ9UBG7 517 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 ATAD5Q96QE3 1844 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 PFASO15067 1338 aa15.07■□□□□ 0
APOBEC3B-204ENST00000407298 IPO8O15397 1037 aaKnown RBP15.06■□□□□ 0
APOBEC3B-204ENST00000407298 GNAI2P04899 355 aa15.06■□□□□ 0
APOBEC3B-204ENST00000407298 MCAMP43121 646 aa15.06■□□□□ 0
APOBEC3B-204ENST00000407298 CCDC158Q5M9N0 1113 aa15.06■□□□□ 0
APOBEC3B-204ENST00000407298 MORN1Q5T089 497 aa15.06■□□□□ 0
APOBEC3B-204ENST00000407298 MFSD14CQ5VZR4 134 aa15.06■□□□□ 0
APOBEC3B-204ENST00000407298 LHX8Q68G74 356 aa15.06■□□□□ 0
APOBEC3B-204ENST00000407298 FAM109BQ6ICB4 259 aaPredicted RBP15.06■□□□□ 0
APOBEC3B-204ENST00000407298 TGFBRAP1Q8WUH2 860 aa15.06■□□□□ 0
APOBEC3B-204ENST00000407298 RABGAP1Q9Y3P9 1069 aa15.06■□□□□ 0
APOBEC3B-204ENST00000407298 MSCO60682 206 aa15.05■□□□□ -0
APOBEC3B-204ENST00000407298 Q3C1V9 767 aa15.05■□□□□ -0
APOBEC3B-204ENST00000407298 TTC39AQ5SRH9 613 aa15.05■□□□□ -0
APOBEC3B-204ENST00000407298 CERS3Q8IU89 383 aa15.05■□□□□ -0
APOBEC3B-204ENST00000407298 MAPKAPK5Q8IW41 473 aa15.05■□□□□ -0
APOBEC3B-204ENST00000407298 EDC3Q96F86 508 aaKnown RBP15.05■□□□□ -0
APOBEC3B-204ENST00000407298 PAGR1Q9BTK6 254 aa15.05■□□□□ -0
APOBEC3B-204ENST00000407298 ZBTB21Q9ULJ3 1066 aa15.05■□□□□ -0
APOBEC3B-204ENST00000407298 DNAH12Q6ZR08 3092 aa15.05■□□□□ -0
APOBEC3B-204ENST00000407298 PLXNB2O15031 1838 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 FLT1P17948 1338 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 USP17L15C9J2P7 530 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 USP17L13C9JLJ4 530 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 USP17L11C9JVI0 530 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 USP17L18D6R9N7 530 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 USP17L22D6RA61 530 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 USP17L17D6RBQ6 530 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 USP17L19D6RCP7 530 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 USP17L20D6RJB6 530 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 CCND3P30281 292 aaPredicted RBP15.04■□□□□ -0
APOBEC3B-204ENST00000407298 USP17L24Q0WX57 530 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 MAP2K5Q13163 448 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 LRRC26Q2I0M4 334 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 PORCNQ9H237 461 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 GPR108Q9NPR9 543 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 PRKAG2Q9UGJ0 569 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 PALD1Q9ULE6 856 aa15.04■□□□□ -0
APOBEC3B-204ENST00000407298 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
APOBEC3B-204ENST00000407298 GDF11O95390 407 aa15.03■□□□□ -0
APOBEC3B-204ENST00000407298 RARSP54136 660 aaKnown RBP15.03■□□□□ -0
APOBEC3B-204ENST00000407298 USP14P54578 494 aa15.03■□□□□ -0
APOBEC3B-204ENST00000407298 MDM2Q00987 491 aaPredicted RBP15.03■□□□□ -0
APOBEC3B-204ENST00000407298 FEZ1Q99689 392 aa15.03■□□□□ -0
APOBEC3B-204ENST00000407298 EMILIN3Q9NT22 766 aa15.03■□□□□ -0
APOBEC3B-204ENST00000407298 IVNS1ABPQ9Y6Y0 642 aa15.03■□□□□ -0
APOBEC3B-204ENST00000407298 ATP2B2Q01814 1243 aa15.02■□□□□ -0
APOBEC3B-204ENST00000407298 CCL14Q16627 93 aa15.02■□□□□ -0
APOBEC3B-204ENST00000407298 C12orf42Q96LP6 360 aa15.02■□□□□ -0
APOBEC3B-204ENST00000407298 SENP6Q9GZR1 1112 aaPredicted RBP15.02■□□□□ -0
APOBEC3B-204ENST00000407298 DNAJC18Q9H819 358 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms