RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 SBK1Q52WX2 424 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 FLAD1Q8NFF5 587 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
PRAME-205ENST00000405655 DDX4Q9NQI0 724 aaKnown RBP16.34■□□□□ 0.21
PRAME-205ENST00000405655 TTF2Q9UNY4 1162 aaKnown RBP16.34■□□□□ 0.21
PRAME-205ENST00000405655 DDX60LQ5H9U9 1706 aaKnown RBP16.34■□□□□ 0.21
PRAME-205ENST00000405655 H0YIN7 160 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 ORC4O43929 436 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 BAG3O95817 575 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 ALDH1B1P30837 517 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 GSTO1P78417 241 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 CLEC10AQ8IUN9 316 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 STK32BQ9NY57 414 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 VPS54Q9P1Q0 977 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
PRAME-205ENST00000405655 FLT1P17948 1338 aa16.34■□□□□ 0.21
PRAME-205ENST00000405655 A0A1B0GVL5 298 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 ATP2B1P20020 1258 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 FUT2Q10981 343 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 PKN1Q16512 942 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 IQCA1Q86XH1 822 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 SRBD1Q8N5C6 995 aaKnown RBP16.33■□□□□ 0.2
PRAME-205ENST00000405655 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 MKNK2Q9HBH9 465 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 G3V3G9 751 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 CDKL5O76039 1030 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 AOC3Q16853 763 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 EARS2Q5JPH6 523 aaKnown RBP16.33■□□□□ 0.2
PRAME-205ENST00000405655 DCAF8Q5TAQ9 597 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 KIAA0825Q8IV33 1275 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 ZFPM1Q8IX07 1006 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 NOL10Q9BSC4 688 aaKnown RBP16.33■□□□□ 0.2
PRAME-205ENST00000405655 COA1Q9GZY4 146 aa16.33■□□□□ 0.2
PRAME-205ENST00000405655 C21orf2O43822 256 aa16.32■□□□□ 0.2
PRAME-205ENST00000405655 WDHD1O75717 1129 aaPredicted RBP16.32■□□□□ 0.2
PRAME-205ENST00000405655 PDIA4P13667 645 aaKnown RBP16.32■□□□□ 0.2
PRAME-205ENST00000405655 PDE4BQ07343 736 aa16.32■□□□□ 0.2
PRAME-205ENST00000405655 SF3A1Q15459 793 aaKnown RBP16.32■□□□□ 0.2
PRAME-205ENST00000405655 CPLX2Q6PUV4 134 aaKnown RBP16.32■□□□□ 0.2
PRAME-205ENST00000405655 CATIPQ7Z7H3 387 aa16.32■□□□□ 0.2
PRAME-205ENST00000405655 LINC00301Q8NCQ3 95 aa16.32■□□□□ 0.2
PRAME-205ENST00000405655 ZNF396Q96N95 335 aaPredicted RBP16.32■□□□□ 0.2
PRAME-205ENST00000405655 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRAME-205ENST00000405655 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
PRAME-205ENST00000405655 FAM205AQ6ZU69 1335 aa16.32■□□□□ 0.2
PRAME-205ENST00000405655 LDHCP07864 332 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 RASA1P20936 1047 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
PRAME-205ENST00000405655 STK38Q15208 465 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 SLC35G1Q2M3R5 365 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 CLIC6Q96NY7 704 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 WNT7AO00755 349 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 GOLGA8HP0CJ92 632 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 CDK8P49336 464 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 NFIAQ12857 509 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 SNW1Q13573 536 aaKnown RBP16.31■□□□□ 0.2
PRAME-205ENST00000405655 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
PRAME-205ENST00000405655 SPECC1Q5M775 1068 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 FSIP1Q8NA03 581 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
PRAME-205ENST00000405655 FAM196BA6NMK8 535 aa16.3■□□□□ 0.2
PRAME-205ENST00000405655 TOB1P50616 345 aaPredicted RBP16.3■□□□□ 0.2
PRAME-205ENST00000405655 ANO1Q5XXA6 986 aa16.3■□□□□ 0.2
PRAME-205ENST00000405655 DIS3L2Q8IYB7 885 aaKnown RBP16.3■□□□□ 0.2
PRAME-205ENST00000405655 TMTC2Q8N394 836 aa16.3■□□□□ 0.2
PRAME-205ENST00000405655 TNMDQ9H2S6 317 aa16.3■□□□□ 0.2
PRAME-205ENST00000405655 ISY1Q9ULR0 285 aaKnown RBP16.3■□□□□ 0.2
PRAME-205ENST00000405655 GAKO14976 1311 aa16.3■□□□□ 0.2
PRAME-205ENST00000405655 EIF6P56537 245 aaKnown RBP16.3■□□□□ 0.2
PRAME-205ENST00000405655 GRIN1Q05586 938 aa16.3■□□□□ 0.2
PRAME-205ENST00000405655 NID2Q14112 1375 aa16.3■□□□□ 0.2
PRAME-205ENST00000405655 AP5Z1O43299 807 aa16.29■□□□□ 0.2
PRAME-205ENST00000405655 ECE2O60344 883 aa16.29■□□□□ 0.2
PRAME-205ENST00000405655 MMP1P03956 469 aa16.29■□□□□ 0.2
PRAME-205ENST00000405655 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
PRAME-205ENST00000405655 TSPY3P0CV98 308 aa16.29■□□□□ 0.2
PRAME-205ENST00000405655 TSPY8P0CW00 308 aa16.29■□□□□ 0.2
PRAME-205ENST00000405655 NDUFA8P51970 172 aa16.29■□□□□ 0.2
PRAME-205ENST00000405655 RRAGDQ9NQL2 400 aaPredicted RBP16.29■□□□□ 0.2
PRAME-205ENST00000405655 USP40Q9NVE5 1235 aa16.29■□□□□ 0.2
PRAME-205ENST00000405655 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
PRAME-205ENST00000405655 SNED1Q8TER0 1413 aa16.29■□□□□ 0.2
PRAME-205ENST00000405655 SPTLC2O15270 562 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 TCP10Q12799 353 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 TRIM29Q14134 588 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 TRIM22Q8IYM9 498 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 C7orf43Q8WVR3 580 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 CLSTN2Q9H4D0 955 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 FOCADQ5VW36 1801 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 DEXIO95424 95 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 CDC42EP5Q6NZY7 148 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 TMTC3Q6ZXV5 915 aa16.28■□□□□ 0.2
PRAME-205ENST00000405655 ZNF444Q8N0Y2 327 aaPredicted RBP16.28■□□□□ 0.2
PRAME-205ENST00000405655 TBC1D22AQ8WUA7 517 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms