RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 TCHPQ9BT92 498 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 B4E1Z4 1266 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 CHUKO15111 745 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 CYP7A1P22680 504 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 ERCC5P28715 1186 aaPredicted RBP10.89□□□□□ -0.67
HERC3-202ENST00000402738 RBM6P78332 1123 aaKnown RBP10.89□□□□□ -0.67
HERC3-202ENST00000402738 PSMD6Q15008 389 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 DBN1Q16643 649 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 RRAGAQ7L523 313 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 SDCCAG8Q86SQ7 713 aaPredicted RBP10.89□□□□□ -0.67
HERC3-202ENST00000402738 KSR1Q8IVT5 923 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 UHMK1Q8TAS1 419 aaKnown RBP10.89□□□□□ -0.67
HERC3-202ENST00000402738 NCAPGQ9BPX3 1015 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 HELLSQ9NRZ9 838 aa10.89□□□□□ -0.67
HERC3-202ENST00000402738 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.89□□□□□ -0.67
HERC3-202ENST00000402738 NUTM2BA6NNL0 878 aaPredicted RBP10.88□□□□□ -0.67
HERC3-202ENST00000402738 NUTM2EB1AL46 878 aaPredicted RBP10.88□□□□□ -0.67
HERC3-202ENST00000402738 BAG2O95816 211 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 APBA1Q02410 837 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
HERC3-202ENST00000402738 TMCO4Q5TGY1 634 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 NBPF14Q5TI25 921 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 PEX26Q7Z412 305 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 LINS1Q8NG48 757 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 DPH5Q9H2P9 285 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 HOMER3Q9NSC5 361 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 SNAPC4Q5SXM2 1469 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 KRT15P19012 456 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 IFNAR2P48551 515 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 RASEFQ8IZ41 740 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 CRACR2BQ8N4Y2 399 aaPredicted RBP10.88□□□□□ -0.67
HERC3-202ENST00000402738 EPN1Q9Y6I3 576 aaPredicted RBP10.88□□□□□ -0.67
HERC3-202ENST00000402738 RTL9Q8NET4 1388 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 SSH2Q76I76 1423 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 BUB1O43683 1085 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 EIF4A2Q14240 407 aaKnown RBP10.88□□□□□ -0.67
HERC3-202ENST00000402738 TAF11Q15544 211 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 PTPROQ16827 1216 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 DDX23Q9BUQ8 820 aaKnown RBP10.88□□□□□ -0.67
HERC3-202ENST00000402738 NUP160Q12769 1436 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 CASP14P31944 242 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 SH3BGRP55822 239 aaPredicted RBP10.88□□□□□ -0.67
HERC3-202ENST00000402738 CUL4AQ13619 759 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 IQSEC3Q9UPP2 1182 aaPredicted RBP10.88□□□□□ -0.67
HERC3-202ENST00000402738 NDUFB9Q9Y6M9 179 aa10.88□□□□□ -0.67
HERC3-202ENST00000402738 KCNJ18B7U540 433 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 KCNK3O14649 394 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 TCP1P17987 556 aaKnown RBP10.87□□□□□ -0.67
HERC3-202ENST00000402738 ACTN3Q08043 901 aaPredicted RBP10.87□□□□□ -0.67
HERC3-202ENST00000402738 KLHL30Q0D2K2 578 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 KCNJ12Q14500 433 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 SV2BQ7L1I2 683 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 KCNH5Q8NCM2 988 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 NLRC4Q9NPP4 1024 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 MRFAP1Q9Y605 127 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 NNTQ13423 1086 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 CLUL1Q15846 466 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 FAM133BQ5BKY9 247 aaKnown RBP10.87□□□□□ -0.67
HERC3-202ENST00000402738 CCDC105Q8IYK2 499 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 ABTB1Q969K4 478 aaPredicted RBP10.87□□□□□ -0.67
HERC3-202ENST00000402738 MYL10Q9BUA6 226 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 FAF1Q9UNN5 650 aaPredicted RBP10.87□□□□□ -0.67
HERC3-202ENST00000402738 KIF1CO43896 1103 aaKnown RBP10.87□□□□□ -0.67
HERC3-202ENST00000402738 TNFAIP3P21580 790 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 PIK3AP1Q6ZUJ8 805 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 SAAL1Q96ER3 474 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 SYNCQ9H7C4 482 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 KCNJ14Q9UNX9 436 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 DEXIO95424 95 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 CMA1P23946 247 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 PPP1R2P41236 205 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 UBL4BQ8N7F7 174 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 YIPF3Q9GZM5 350 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 RAB17Q9H0T7 212 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 EPC1Q9H2F5 836 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 ACTR5Q9H9F9 607 aaPredicted RBP10.87□□□□□ -0.67
HERC3-202ENST00000402738 ANGEL1Q9UNK9 670 aaKnown RBP10.87□□□□□ -0.67
HERC3-202ENST00000402738 COMMD10Q9Y6G5 202 aa10.87□□□□□ -0.67
HERC3-202ENST00000402738 FAM170AA1A519 330 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 USP27XA6NNY8 438 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 CALM1P0DP23 149 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 CALM2P0DP24 149 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 CALM3P0DP25 149 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 CYP2C19P33261 490 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 GNAQP50148 359 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 PLCD1P51178 756 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 INF2Q27J81 1249 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 CNNM4Q6P4Q7 775 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 SRLQ86TD4 932 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 TSC22D3Q99576 134 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 MAGI1Q96QZ7 1491 aaPredicted RBP10.86□□□□□ -0.67
HERC3-202ENST00000402738 KRIT1O00522 736 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 EPHB4P54760 987 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 ANKRD13CQ8N6S4 541 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 KLHDC4Q8TBB5 520 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 CDC5LQ99459 802 aaKnown RBP10.86□□□□□ -0.67
HERC3-202ENST00000402738 C6orf50Q9HD87 102 aa10.86□□□□□ -0.67
HERC3-202ENST00000402738 SUFUQ9UMX1 484 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms