RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 ARMT1Q9H993 441 aa19.19■□□□□ 0.66
ATG4B-203ENST00000400772 AS3MTQ9HBK9 375 aa19.19■□□□□ 0.66
ATG4B-203ENST00000400772 GINM1Q9NU53 330 aa19.19■□□□□ 0.66
ATG4B-203ENST00000400772 ZBTB21Q9ULJ3 1066 aa19.19■□□□□ 0.66
ATG4B-203ENST00000400772 PRKAB2O43741 272 aa19.18■□□□□ 0.66
ATG4B-203ENST00000400772 GNRH1P01148 92 aa19.18■□□□□ 0.66
ATG4B-203ENST00000400772 UBE3CQ15386 1083 aa19.18■□□□□ 0.66
ATG4B-203ENST00000400772 TSHZ3Q63HK5 1081 aa19.18■□□□□ 0.66
ATG4B-203ENST00000400772 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.18■□□□□ 0.662e-6■■□□□ 13.4
ATG4B-203ENST00000400772 DCP1AQ9NPI6 582 aaPredicted RBP19.18■□□□□ 0.66
ATG4B-203ENST00000400772 POLR3DP05423 398 aaPredicted RBP19.17■□□□□ 0.66
ATG4B-203ENST00000400772 SHMT1P34896 483 aa19.17■□□□□ 0.66
ATG4B-203ENST00000400772 BACE1P56817 501 aa19.17■□□□□ 0.66
ATG4B-203ENST00000400772 GABPAQ06546 454 aa19.17■□□□□ 0.66
ATG4B-203ENST00000400772 MTMR2Q13614 643 aa19.17■□□□□ 0.66
ATG4B-203ENST00000400772 DDX60LQ5H9U9 1706 aaKnown RBP19.17■□□□□ 0.66
ATG4B-203ENST00000400772 BRCA2P51587 3418 aa19.16■□□□□ 0.66
ATG4B-203ENST00000400772 MBD4O95243 580 aa19.16■□□□□ 0.66
ATG4B-203ENST00000400772 GH2P01242 217 aa19.16■□□□□ 0.66
ATG4B-203ENST00000400772 OSBPP22059 807 aa19.16■□□□□ 0.66
ATG4B-203ENST00000400772 MCM9Q9NXL9 1143 aa19.16■□□□□ 0.66
ATG4B-203ENST00000400772 SRRDQ9UH36 339 aa19.16■□□□□ 0.66
ATG4B-203ENST00000400772 LOC285556D6RIA3 1793 aa19.16■□□□□ 0.66
ATG4B-203ENST00000400772 FMNL1O95466 1100 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-203ENST00000400772 CYP2D6P10635 497 aa19.15■□□□□ 0.66
ATG4B-203ENST00000400772 CERKLQ49MI3 558 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-203ENST00000400772 OTUD7AQ8TE49 926 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-203ENST00000400772 SMCR8Q8TEV9 937 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-203ENST00000400772 ZNF333Q96JL9 665 aa19.15■□□□□ 0.66
ATG4B-203ENST00000400772 PUS7LQ9H0K6 701 aaKnown RBP19.15■□□□□ 0.66
ATG4B-203ENST00000400772 POTEFA5A3E0 1075 aa19.14■□□□□ 0.65
ATG4B-203ENST00000400772 C19orf81C9J6K1 198 aa19.14■□□□□ 0.65
ATG4B-203ENST00000400772 USP17L10C9JJH3 530 aa19.14■□□□□ 0.65
ATG4B-203ENST00000400772 PRMT2P55345 433 aa19.14■□□□□ 0.65
ATG4B-203ENST00000400772 ANKRD13CQ8N6S4 541 aa19.14■□□□□ 0.65
ATG4B-203ENST00000400772 ASCC2Q9H1I8 757 aaPredicted RBP19.14■□□□□ 0.65
ATG4B-203ENST00000400772 EMILIN3Q9NT22 766 aa19.14■□□□□ 0.65
ATG4B-203ENST00000400772 PNMA3Q9UL41 463 aa19.14■□□□□ 0.65
ATG4B-203ENST00000400772 NAV1Q8NEY1 1877 aa19.14■□□□□ 0.65
ATG4B-203ENST00000400772 SMIM22K7EJ46 135 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 HOXD10P28358 340 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 HOXA7P31268 230 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-203ENST00000400772 GUCY1A2P33402 732 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 FCGRTP55899 365 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 ABCB5Q2M3G0 1257 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 SLC9C1Q4G0N8 1177 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 ZSCAN25Q6NSZ9 544 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 KBTBD3Q8NAB2 608 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 SH3TC2Q8TF17 1288 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 GPATCH3Q96I76 525 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 ATP8A2Q9NTI2 1148 aa19.13■□□□□ 0.65
ATG4B-203ENST00000400772 TTC41PQ6P2S7 1318 aa19.12■□□□□ 0.65
ATG4B-203ENST00000400772 PABPC4Q13310 644 aaKnown RBP eCLIP19.12■□□□□ 0.65
ATG4B-203ENST00000400772 NBPF11Q86T75 865 aa19.12■□□□□ 0.65
ATG4B-203ENST00000400772 PI4K2BQ8TCG2 481 aa19.12■□□□□ 0.65
ATG4B-203ENST00000400772 DYNLL2Q96FJ2 89 aa19.12■□□□□ 0.65
ATG4B-203ENST00000400772 TMOD4Q9NZQ9 345 aa19.12■□□□□ 0.65
ATG4B-203ENST00000400772 MYH7P12883 1935 aa19.12■□□□□ 0.65
ATG4B-203ENST00000400772 MYPNQ86TC9 1320 aa19.11■□□□□ 0.65
ATG4B-203ENST00000400772 PRKCZQ05513 592 aa19.11■□□□□ 0.65
ATG4B-203ENST00000400772 HDAC1Q13547 482 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-203ENST00000400772 RAB3GAP1Q15042 981 aa19.11■□□□□ 0.65
ATG4B-203ENST00000400772 FAM110CQ1W6H9 321 aa19.11■□□□□ 0.65
ATG4B-203ENST00000400772 SLC44A5Q8NCS7 719 aa19.11■□□□□ 0.65
ATG4B-203ENST00000400772 ACER1Q8TDN7 264 aa19.11■□□□□ 0.65
ATG4B-203ENST00000400772 P2RX7Q99572 595 aaKnown RBP19.11■□□□□ 0.65
ATG4B-203ENST00000400772 GABRQQ9UN88 632 aa19.11■□□□□ 0.65
ATG4B-203ENST00000400772 SLC4A4Q9Y6R1 1079 aa19.11■□□□□ 0.65
ATG4B-203ENST00000400772 MGAMO43451 1857 aa19.1■□□□□ 0.65
ATG4B-203ENST00000400772 SALL3Q9BXA9 1300 aa19.1■□□□□ 0.65
ATG4B-203ENST00000400772 CYP2D7A0A087X1C5 515 aa19.1■□□□□ 0.65
ATG4B-203ENST00000400772 GCLCP48506 637 aaPredicted RBP19.1■□□□□ 0.65
ATG4B-203ENST00000400772 C12orf60Q5U649 245 aa19.1■□□□□ 0.65
ATG4B-203ENST00000400772 USP17L2Q6R6M4 530 aa19.1■□□□□ 0.65
ATG4B-203ENST00000400772 OSBP2Q969R2 916 aa19.1■□□□□ 0.65
ATG4B-203ENST00000400772 STRBPQ96SI9 672 aaKnown RBP19.1■□□□□ 0.65
ATG4B-203ENST00000400772 CABP5Q9NP86 173 aa19.1■□□□□ 0.65
ATG4B-203ENST00000400772 USP17L12C9JPN9 530 aa19.09■□□□□ 0.65
ATG4B-203ENST00000400772 USP17L21D6R901 530 aa19.09■□□□□ 0.65
ATG4B-203ENST00000400772 RNF113AO15541 343 aaKnown RBP19.09■□□□□ 0.65
ATG4B-203ENST00000400772 SEPT2Q15019 361 aa19.09■□□□□ 0.65
ATG4B-203ENST00000400772 ANKRD45Q5TZF3 282 aa19.09■□□□□ 0.65
ATG4B-203ENST00000400772 POTEEQ6S8J3 1075 aa19.09■□□□□ 0.65
ATG4B-203ENST00000400772 RAET1EQ8TD07 263 aa19.09■□□□□ 0.65
ATG4B-203ENST00000400772 C12orf42Q96LP6 360 aa19.09■□□□□ 0.65
ATG4B-203ENST00000400772 BAZ2AQ9UIF9 1905 aaKnown RBP19.08■□□□□ 0.65
ATG4B-203ENST00000400772 PEX10O60683 326 aa19.08■□□□□ 0.64
ATG4B-203ENST00000400772 EN2P19622 333 aaPredicted RBP19.08■□□□□ 0.64
ATG4B-203ENST00000400772 ZYXQ15942 572 aaKnown RBP19.08■□□□□ 0.64
ATG4B-203ENST00000400772 CTR9Q6PD62 1173 aa19.08■□□□□ 0.64
ATG4B-203ENST00000400772 APPBP2Q92624 585 aa19.08■□□□□ 0.64
ATG4B-203ENST00000400772 GCC1Q96CN9 775 aa19.08■□□□□ 0.64
ATG4B-203ENST00000400772 KIAA1683Q9H0B3 1180 aa19.08■□□□□ 0.64
ATG4B-203ENST00000400772 TXNRD2Q9NNW7 524 aa19.08■□□□□ 0.64
ATG4B-203ENST00000400772 SWAP70Q9UH65 585 aa19.08■□□□□ 0.64
ATG4B-203ENST00000400772 KIAA0100Q14667 2235 aaKnown RBP19.08■□□□□ 0.64
ATG4B-203ENST00000400772 A0A1W2PRG0 241 aa19.07■□□□□ 0.64
ATG4B-203ENST00000400772 TNPO2O14787 897 aaKnown RBP19.07■□□□□ 0.64
ATG4B-203ENST00000400772 ERC2O15083 957 aa19.07■□□□□ 0.64
ATG4B-203ENST00000400772 GLRX3O76003 335 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms