RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 NECAB2Q7Z6G3 386 aa14.64□□□□□ -0.07
LINC00544-201ENST00000400540 C7orf61Q8IZ16 206 aa14.64□□□□□ -0.07
LINC00544-201ENST00000400540 LRCH3Q96II8 777 aa14.64□□□□□ -0.07
LINC00544-201ENST00000400540 P2RX7Q99572 595 aaKnown RBP14.64□□□□□ -0.07
LINC00544-201ENST00000400540 WDR18Q9BV38 432 aa14.64□□□□□ -0.07
LINC00544-201ENST00000400540 C1orf115Q9H7X2 142 aa14.64□□□□□ -0.07
LINC00544-201ENST00000400540 PIH1D3Q9NQM4 214 aaKnown RBP14.64□□□□□ -0.07
LINC00544-201ENST00000400540 SAP30BPQ9UHR5 308 aaKnown RBP14.64□□□□□ -0.07
LINC00544-201ENST00000400540 PALD1Q9ULE6 856 aa14.64□□□□□ -0.07
LINC00544-201ENST00000400540 IPO8O15397 1037 aaKnown RBP14.63□□□□□ -0.07
LINC00544-201ENST00000400540 BAG3O95817 575 aa14.63□□□□□ -0.07
LINC00544-201ENST00000400540 ASNSP08243 561 aa14.63□□□□□ -0.07
LINC00544-201ENST00000400540 ZAP70P43403 619 aa14.63□□□□□ -0.07
LINC00544-201ENST00000400540 PPP4CP60510 307 aa14.63□□□□□ -0.07
LINC00544-201ENST00000400540 HERVK_113P62684 666 aa14.63□□□□□ -0.07
LINC00544-201ENST00000400540 DYNLL1P63167 89 aaKnown RBP14.63□□□□□ -0.07
LINC00544-201ENST00000400540 POLA2Q14181 598 aa14.63□□□□□ -0.07
LINC00544-201ENST00000400540 CRACR2BQ8N4Y2 399 aaPredicted RBP14.63□□□□□ -0.07
LINC00544-201ENST00000400540 DHX36Q9H2U1 1008 aaKnown RBP14.63□□□□□ -0.07
LINC00544-201ENST00000400540 HMX1Q9NP08 348 aaPredicted RBP14.63□□□□□ -0.07
LINC00544-201ENST00000400540 TLR7Q9NYK1 1049 aaKnown RBP14.63□□□□□ -0.07
LINC00544-201ENST00000400540 TMOD4Q9NZQ9 345 aa14.63□□□□□ -0.07
LINC00544-201ENST00000400540 ZMYND8Q9ULU4 1186 aaPredicted RBP14.63□□□□□ -0.07
LINC00544-201ENST00000400540 UNC80Q8N2C7 3258 aa14.63□□□□□ -0.07
LINC00544-201ENST00000400540 RPTORQ8N122 1335 aa14.63□□□□□ -0.07
LINC00544-201ENST00000400540 OS9Q13438 667 aaPredicted RBP14.62□□□□□ -0.07
LINC00544-201ENST00000400540 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
LINC00544-201ENST00000400540 METTL16Q86W50 562 aaKnown RBP14.62□□□□□ -0.07
LINC00544-201ENST00000400540 GPR108Q9NPR9 543 aa14.62□□□□□ -0.07
LINC00544-201ENST00000400540 ZBTB21Q9ULJ3 1066 aa14.62□□□□□ -0.07
LINC00544-201ENST00000400540 A0A0C4DFX4 3053 aa14.62□□□□□ -0.07
LINC00544-201ENST00000400540 A0A1W2PPC1 479 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 USP17L10C9JJH3 530 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 PRKAR2AP13861 404 aaKnown RBP14.61□□□□□ -0.07
LINC00544-201ENST00000400540 PLCG2P16885 1265 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 SYN1P17600 705 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 CAPN2P17655 700 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 HOXA7P31268 230 aaPredicted RBP14.61□□□□□ -0.07
LINC00544-201ENST00000400540 Q3C1V9 767 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 CCDC158Q5M9N0 1113 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 MAP3K21Q5TCX8 1036 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 ANKLE1Q8NAG6 615 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 SSH3Q8TE77 659 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 TRIM34Q9BYJ4 488 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 PORCNQ9H237 461 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 RBPJLQ9UBG7 517 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 DBNLQ9UJU6 430 aaKnown RBP14.61□□□□□ -0.07
LINC00544-201ENST00000400540 NDUFB9Q9Y6M9 179 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 PARP14Q460N5 1801 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 A0A0G2JMZ2 1700 aa14.61□□□□□ -0.07
LINC00544-201ENST00000400540 RLFQ13129 1914 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 CCER2I3L3R5 266 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 SURF6O75683 361 aaKnown RBP14.6□□□□□ -0.07
LINC00544-201ENST00000400540 MIGA1Q8NAN2 632 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 GPRC5AQ8NFJ5 357 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 GDF15Q99988 308 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 PAGR1Q9BTK6 254 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 NBPF3Q9H094 633 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 CCDC8Q9H0W5 538 aaPredicted RBP14.6□□□□□ -0.07
LINC00544-201ENST00000400540 C11orf49Q9H6J7 331 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 EMILIN3Q9NT22 766 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 OGDHLQ9ULD0 1010 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 PFASO15067 1338 aa14.6□□□□□ -0.07
LINC00544-201ENST00000400540 EYSQ5T1H1 3165 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 BAZ2AQ9UIF9 1905 aaKnown RBP14.59□□□□□ -0.07
LINC00544-201ENST00000400540 C19orf81C9J6K1 198 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 GH2P01242 217 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 CYP7A1P22680 504 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 ERVK-9P63128 1117 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 ERVK-24P63145 666 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 ATP8B2P98198 1209 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 ZYXQ15942 572 aaKnown RBP14.59□□□□□ -0.07
LINC00544-201ENST00000400540 CCL14Q16627 93 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 ZKSCAN2Q63HK3 967 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 FOXP4Q8IVH2 680 aaPredicted RBP14.59□□□□□ -0.07
LINC00544-201ENST00000400540 NUDT12Q9BQG2 462 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 LTBP2Q14767 1821 aa14.59□□□□□ -0.07
LINC00544-201ENST00000400540 MYH7P12883 1935 aa14.58□□□□□ -0.07
LINC00544-201ENST00000400540 COL11A1P12107 1806 aaPredicted RBP14.58□□□□□ -0.08
LINC00544-201ENST00000400540 HLA-DOAP06340 250 aa14.58□□□□□ -0.08
LINC00544-201ENST00000400540 ZKSCAN1P17029 563 aaPredicted RBP14.58□□□□□ -0.08
LINC00544-201ENST00000400540 CCND3P30281 292 aaPredicted RBP14.58□□□□□ -0.08
LINC00544-201ENST00000400540 CACNB2Q08289 660 aaPredicted RBP14.58□□□□□ -0.08
LINC00544-201ENST00000400540 GPR142Q7Z601 462 aa14.58□□□□□ -0.08
LINC00544-201ENST00000400540 SOCS4Q8WXH5 440 aa14.58□□□□□ -0.08
LINC00544-201ENST00000400540 USP6NLQ92738 828 aa14.58□□□□□ -0.08
LINC00544-201ENST00000400540 EAF2Q96CJ1 260 aaPredicted RBP14.58□□□□□ -0.08
LINC00544-201ENST00000400540 ZNF512BQ96KM6 892 aaPredicted RBP14.58□□□□□ -0.08
LINC00544-201ENST00000400540 ZNF236Q9UL36 1845 aa14.57□□□□□ -0.08
LINC00544-201ENST00000400540 CNMDO75829 334 aa14.57□□□□□ -0.08
LINC00544-201ENST00000400540 IDH1O75874 414 aaKnown RBP14.57□□□□□ -0.08
LINC00544-201ENST00000400540 RLBP1P12271 317 aa14.57□□□□□ -0.08
LINC00544-201ENST00000400540 XRCC5P13010 732 aaKnown RBP14.57□□□□□ -0.08
LINC00544-201ENST00000400540 MAPK4P31152 587 aa14.57□□□□□ -0.08
LINC00544-201ENST00000400540 MAGEA10P43363 369 aaPredicted RBP14.57□□□□□ -0.08
LINC00544-201ENST00000400540 PDE3AQ14432 1141 aa14.57□□□□□ -0.08
LINC00544-201ENST00000400540 MORN1Q5T089 497 aa14.57□□□□□ -0.08
LINC00544-201ENST00000400540 USP17L2Q6R6M4 530 aa14.57□□□□□ -0.08
LINC00544-201ENST00000400540 MAGEB6Q8N7X4 407 aa14.57□□□□□ -0.08
LINC00544-201ENST00000400540 ANTXR1Q9H6X2 564 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms