RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 DDX60LQ5H9U9 1706 aaKnown RBP18.16■□□□□ 0.5
CDC42-203ENST00000400259 BTBD18B2RXH4 712 aa18.16■□□□□ 0.5
CDC42-203ENST00000400259 CUTAO60888 179 aa18.16■□□□□ 0.5
CDC42-203ENST00000400259 ST5P78524 1137 aa18.16■□□□□ 0.5
CDC42-203ENST00000400259 RPGRQ92834 1020 aaKnown RBP18.16■□□□□ 0.5
CDC42-203ENST00000400259 PRPF3O43395 683 aaKnown RBP18.16■□□□□ 0.5
CDC42-203ENST00000400259 LDHBP07195 334 aaKnown RBP18.16■□□□□ 0.5
CDC42-203ENST00000400259 MARCKSP29966 332 aaPredicted RBP18.16■□□□□ 0.5
CDC42-203ENST00000400259 ZNF75DP51815 510 aa18.16■□□□□ 0.5
CDC42-203ENST00000400259 GSTO1P78417 241 aa18.16■□□□□ 0.5
CDC42-203ENST00000400259 RESP18Q5W5W9 173 aa18.16■□□□□ 0.5
CDC42-203ENST00000400259 ROBO3Q96MS0 1386 aa18.16■□□□□ 0.5
CDC42-203ENST00000400259 PRDM1O75626 825 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 SERPINB2P05120 415 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 RILPL1Q5EBL4 403 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 SHC4Q6S5L8 630 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 CEP57L1Q8IYX8 460 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 PIBF1Q8WXW3 757 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 KCNJ14Q9UNX9 436 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 MORC2Q9Y6X9 1032 aaPredicted RBP18.15■□□□□ 0.5
CDC42-203ENST00000400259 ANKRD31Q8N7Z5 1873 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 FOCADQ5VW36 1801 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 CDC25BP30305 580 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 TOB1P50616 345 aaPredicted RBP18.15■□□□□ 0.5
CDC42-203ENST00000400259 PPP4CP60510 307 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 PDE4BQ07343 736 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 BPIFA3Q9BQP9 254 aa18.15■□□□□ 0.5
CDC42-203ENST00000400259 NAT10Q9H0A0 1025 aaKnown RBP18.15■□□□□ 0.5
CDC42-203ENST00000400259 TTC12Q9H892 705 aaPredicted RBP18.15■□□□□ 0.5
CDC42-203ENST00000400259 GOLGA6L19H0YKK7 550 aa18.14■□□□□ 0.49
CDC42-203ENST00000400259 ATP2B4P23634 1241 aa18.14■□□□□ 0.49
CDC42-203ENST00000400259 HOXA10P31260 410 aaPredicted RBP18.14■□□□□ 0.49
CDC42-203ENST00000400259 RBM6P78332 1123 aaKnown RBP18.14■□□□□ 0.49
CDC42-203ENST00000400259 GPSM2P81274 684 aa18.14■□□□□ 0.49
CDC42-203ENST00000400259 PKN1Q16512 942 aa18.14■□□□□ 0.49
CDC42-203ENST00000400259 DHX40Q8IX18 779 aaKnown RBP18.14■□□□□ 0.49
CDC42-203ENST00000400259 CMTR1Q8N1G2 835 aaKnown RBP18.14■□□□□ 0.49
CDC42-203ENST00000400259 RBM17Q96I25 401 aaKnown RBP18.14■□□□□ 0.49
CDC42-203ENST00000400259 QTRT2Q9H974 415 aaKnown RBP18.14■□□□□ 0.49
CDC42-203ENST00000400259 NRXN2Q9P2S2 1712 aa18.14■□□□□ 0.49
CDC42-203ENST00000400259 XBP1P17861 261 aa18.14■□□□□ 0.49
CDC42-203ENST00000400259 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
CDC42-203ENST00000400259 SYKP43405 635 aa18.14■□□□□ 0.49
CDC42-203ENST00000400259 SLC51AQ86UW1 340 aa18.14■□□□□ 0.49
CDC42-203ENST00000400259 TRIM5Q9C035 493 aa18.14■□□□□ 0.49
CDC42-203ENST00000400259 CYP2D6P10635 497 aa18.13■□□□□ 0.49
CDC42-203ENST00000400259 TERF1P54274 439 aa18.13■□□□□ 0.49
CDC42-203ENST00000400259 AKAP17AQ02040 695 aaKnown RBP18.13■□□□□ 0.49
CDC42-203ENST00000400259 EVX2Q03828 476 aa18.13■□□□□ 0.49
CDC42-203ENST00000400259 TMTC3Q6ZXV5 915 aa18.13■□□□□ 0.49
CDC42-203ENST00000400259 CERS3Q8IU89 383 aa18.13■□□□□ 0.49
CDC42-203ENST00000400259 CCDC82Q8N4S0 544 aa18.13■□□□□ 0.49
CDC42-203ENST00000400259 R3HCC1Q9Y3T6 440 aaKnown RBP18.13■□□□□ 0.49
CDC42-203ENST00000400259 KLRG2A4D1S0 409 aaPredicted RBP18.12■□□□□ 0.49
CDC42-203ENST00000400259 BBOX1O75936 387 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 IL1R1P14778 569 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 C12orf60Q5U649 245 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 ELOA2Q8IYF1 753 aaPredicted RBP18.12■□□□□ 0.49
CDC42-203ENST00000400259 C17orf53Q8N3J3 647 aaPredicted RBP18.12■□□□□ 0.49
CDC42-203ENST00000400259 KRI1Q8N9T8 703 aaKnown RBP18.12■□□□□ 0.49
CDC42-203ENST00000400259 SHISA4Q96DD7 197 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 PHF20Q9BVI0 1012 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 JAG2Q9Y219 1238 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 LDHCP07864 332 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 CRAMP1Q96RY5 1269 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 KCNF1Q9H3M0 494 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 MCM9Q9NXL9 1143 aa18.12■□□□□ 0.49
CDC42-203ENST00000400259 CNTNAP5Q8WYK1 1306 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 PLEKHA8P1O95397 391 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 BAG3O95817 575 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 MRFAP1L1Q96HT8 127 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 SPTLC3Q9NUV7 552 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 TUBE1Q9UJT0 475 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 MYH1P12882 1939 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 BECN2A8MW95 431 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 UFL1O94874 794 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 USP17L8P0C7I0 530 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 PTPREP23469 700 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 NLRP12P59046 1061 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 DDR1Q08345 913 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 NR5A1Q13285 461 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 KRT27Q7Z3Y8 459 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 ZNF579Q8NAF0 562 aaKnown RBP18.11■□□□□ 0.49
CDC42-203ENST00000400259 ANKS1AQ92625 1134 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 ERCC4Q92889 916 aaPredicted RBP18.11■□□□□ 0.49
CDC42-203ENST00000400259 CD209Q9NNX6 404 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 GGA1Q9UJY5 639 aa18.11■□□□□ 0.49
CDC42-203ENST00000400259 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
CDC42-203ENST00000400259 RCSD1Q6JBY9 416 aa18.1■□□□□ 0.49
CDC42-203ENST00000400259 CTCFLQ8NI51 663 aaPredicted RBP18.1■□□□□ 0.49
CDC42-203ENST00000400259 OXER1Q8TDS5 423 aa18.1■□□□□ 0.49
CDC42-203ENST00000400259 SH3RF3Q8TEJ3 882 aaPredicted RBP18.1■□□□□ 0.49
CDC42-203ENST00000400259 CLIC6Q96NY7 704 aa18.1■□□□□ 0.49
CDC42-203ENST00000400259 FBXO2Q9UK22 296 aaPredicted RBP18.1■□□□□ 0.49
CDC42-203ENST00000400259 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
CDC42-203ENST00000400259 CEP131Q9UPN4 1083 aa18.1■□□□□ 0.49
CDC42-203ENST00000400259 USP5P45974 858 aa18.1■□□□□ 0.49
CDC42-203ENST00000400259 ZRSR1Q15695 479 aaKnown RBP18.1■□□□□ 0.49
CDC42-203ENST00000400259 GRIK5Q16478 980 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms