RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 NBPF6Q5VWK0 638 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 NBPF5PQ86XG9 351 aaPredicted RBP15.39■□□□□ 0.05
RUNX3-203ENST00000399916 IL17RAQ96F46 866 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 NBPF4Q96M43 638 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 ATP7BP35670 1465 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 PGBD1Q96JS3 809 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 ALS2CR12Q96Q35 445 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 RWDD2BP57060 319 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 PARP9Q8IXQ6 854 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 SPAG5Q96R06 1193 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 TRIM31Q9BZY9 425 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 PSD3Q9NYI0 1048 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 CUTAO60888 179 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 SRGAP2O75044 1071 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
RUNX3-203ENST00000399916 TAF11Q15544 211 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 SH2D3CQ8N5H7 860 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 EAF2Q96CJ1 260 aaPredicted RBP15.39■□□□□ 0.05
RUNX3-203ENST00000399916 TM6SF1Q9BZW5 370 aa15.39■□□□□ 0.05
RUNX3-203ENST00000399916 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
RUNX3-203ENST00000399916 NEXMIFQ5QGS0 1516 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 PPLO60437 1756 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 HAUS2Q9NVX0 235 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 TLR7Q9NYK1 1049 aaKnown RBP15.38■□□□□ 0.05
RUNX3-203ENST00000399916 ARHGEF28Q8N1W1 1705 aaKnown RBP15.38■□□□□ 0.05
RUNX3-203ENST00000399916 UBXN1Q04323 297 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 NUTM2AQ8IVF1 878 aaPredicted RBP15.38■□□□□ 0.05
RUNX3-203ENST00000399916 SUGP1Q8IWZ8 645 aaKnown RBP15.38■□□□□ 0.05
RUNX3-203ENST00000399916 TTF2Q9UNY4 1162 aaKnown RBP15.38■□□□□ 0.05
RUNX3-203ENST00000399916 FLT4P35916 1363 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 KIF3CO14782 793 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 MMP14P50281 582 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 NNTQ13423 1086 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 CACNA2D4Q7Z3S7 1137 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 TAF6LQ9Y6J9 622 aa15.38■□□□□ 0.05
RUNX3-203ENST00000399916 FAM170AA1A519 330 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 TACC1O75410 805 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 IRAK1P51617 712 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 MTF1Q14872 753 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 SEPT7Q16181 437 aaKnown RBP15.37■□□□□ 0.05
RUNX3-203ENST00000399916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.37■□□□□ 0.05
RUNX3-203ENST00000399916 ARMCX6Q7L4S7 300 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 MIPOL1Q8TD10 442 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 CCDC43Q96MW1 224 aaKnown RBP15.37■□□□□ 0.05
RUNX3-203ENST00000399916 HIP1RO75146 1068 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 RXRAP19793 462 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 NECTIN1Q15223 517 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 GKAP1Q5VSY0 366 aaPredicted RBP15.37■□□□□ 0.05
RUNX3-203ENST00000399916 PARP3Q9Y6F1 533 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 SBNO1A3KN83 1393 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 GUCY1A3Q02108 690 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 RRAGBQ5VZM2 374 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 SLC30A9Q6PML9 568 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 KLHL7Q8IXQ5 586 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 L2HGDHQ9H9P8 463 aa15.37■□□□□ 0.05
RUNX3-203ENST00000399916 RBM5P52756 815 aaKnown RBP eCLIP15.36■□□□□ 0.05
RUNX3-203ENST00000399916 MICU3Q86XE3 530 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 CNGA4Q8IV77 575 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 ARL10Q8N8L6 244 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 STAMQ92783 540 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 GBP5Q96PP8 586 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 MEFVO15553 781 aaPredicted RBP15.36■□□□□ 0.05
RUNX3-203ENST00000399916 PDHBP11177 359 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 CYLC1P35663 651 aaPredicted RBP15.36■□□□□ 0.05
RUNX3-203ENST00000399916 SNX1Q13596 522 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 COL9A3Q14050 684 aaPredicted RBP15.36■□□□□ 0.05
RUNX3-203ENST00000399916 PTPROQ16827 1216 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 ZNF589Q86UQ0 364 aaPredicted RBP15.36■□□□□ 0.05
RUNX3-203ENST00000399916 IFNAR2P48551 515 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 ARID5AQ03989 594 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 PDE1CQ14123 709 aaPredicted RBP15.36■□□□□ 0.05
RUNX3-203ENST00000399916 BEND3Q5T5X7 828 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 REXO1L1PQ8IX06 675 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 MGARPQ8TDB4 240 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 EEF2KMTQ96G04 330 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 PCDHA7Q9UN72 937 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 FER1L4A9Z1Z3 1794 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 GOLGA8KD6RF30 607 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 STX10O60499 249 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 MTIF2P46199 727 aaKnown RBP15.36■□□□□ 0.05
RUNX3-203ENST00000399916 SEC24CP53992 1094 aa15.36■□□□□ 0.05
RUNX3-203ENST00000399916 DDX27Q96GQ7 796 aaKnown RBP15.36■□□□□ 0.05
RUNX3-203ENST00000399916 ZFYVE27Q5T4F4 411 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 MAP4K1Q92918 833 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 CCDC42Q96M95 316 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 LUC7L2Q9Y383 392 aaKnown RBP15.35■□□□□ 0.05
RUNX3-203ENST00000399916 ZNF335Q9H4Z2 1342 aaPredicted RBP15.35■□□□□ 0.05
RUNX3-203ENST00000399916 UBAP1LF5GYI3 381 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 GCOM1H8Y6P7 765 aaPredicted RBP15.35■□□□□ 0.05
RUNX3-203ENST00000399916 MYZAPP0CAP1 466 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 CXCR5P32302 372 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 C2orf54Q08AI8 447 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 KRT71Q3SY84 523 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 FNBP4Q8N3X1 1017 aaPredicted RBP15.35■□□□□ 0.05
RUNX3-203ENST00000399916 JAKMIP2Q96AA8 810 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 PNKPQ96T60 521 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 LBHD1Q9BQE6 289 aaPredicted RBP15.35■□□□□ 0.05
RUNX3-203ENST00000399916 VCXQ9H320 206 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 KCNK9Q9NPC2 374 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 SWAP70Q9UH65 585 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms