RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 ZNF444Q8N0Y2 327 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 ERCC4Q92889 916 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 CICQ96RK0 1608 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 TSPY3P0CV98 308 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 TSPY8P0CW00 308 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 SPTY2D1Q68D10 685 aaPredicted RBP15.23■□□□□ 0.03
TOP3B-202ENST00000398793 CLEC17AQ6ZS10 378 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 GPT2Q8TD30 523 aa15.23■□□□□ 0.03
TOP3B-202ENST00000398793 RIOK3O14730 519 aaKnown RBP15.22■□□□□ 0.03
TOP3B-202ENST00000398793 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 CHRM1P11229 460 aaPredicted RBP15.22■□□□□ 0.03
TOP3B-202ENST00000398793 KCNA3P22001 575 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 SYNE3Q6ZMZ3 975 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 SPICE1Q8N0Z3 855 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 C4AP0C0L4 1744 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 A0A087WWV3 80 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 CRKP46108 304 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 IFIT1BQ5T764 474 aaKnown RBP15.22■□□□□ 0.03
TOP3B-202ENST00000398793 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
TOP3B-202ENST00000398793 JDP2Q8WYK2 163 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 TMEM63CQ9P1W3 806 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 FRMPD2Q68DX3 1309 aaPredicted RBP15.22■□□□□ 0.03
TOP3B-202ENST00000398793 RTL9Q8NET4 1388 aa15.22■□□□□ 0.03
TOP3B-202ENST00000398793 UBR3Q6ZT12 1888 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 ZBTB43O43298 467 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 PLCB2Q00722 1185 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 EYA3Q99504 573 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 UBA5Q9GZZ9 404 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 ANGEL1Q9UNK9 670 aaKnown RBP15.21■□□□□ 0.03
TOP3B-202ENST00000398793 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 CAPN2P17655 700 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 BRD2P25440 801 aaKnown RBP15.21■□□□□ 0.03
TOP3B-202ENST00000398793 CAMK4Q16566 473 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 NBPF9Q3BBW0 867 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.03
TOP3B-202ENST00000398793 PLEKHA8P1O95397 391 aa15.21■□□□□ 0.02
TOP3B-202ENST00000398793 ANKRD7Q92527 254 aa15.21■□□□□ 0.02
TOP3B-202ENST00000398793 TEKT1Q969V4 418 aa15.21■□□□□ 0.02
TOP3B-202ENST00000398793 COA1Q9GZY4 146 aa15.21■□□□□ 0.02
TOP3B-202ENST00000398793 MYH13Q9UKX3 1938 aa15.21■□□□□ 0.02
TOP3B-202ENST00000398793 IKQ13123 557 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-202ENST00000398793 CFAP100Q494V2 611 aa15.2■□□□□ 0.02
TOP3B-202ENST00000398793 GTF3C6Q969F1 213 aa15.2■□□□□ 0.02
TOP3B-202ENST00000398793 RTFDC1Q9BY42 306 aaPredicted RBP15.2■□□□□ 0.02
TOP3B-202ENST00000398793 MCM2P49736 904 aa15.2■□□□□ 0.02
TOP3B-202ENST00000398793 EXOSC10Q01780 885 aaKnown RBP15.2■□□□□ 0.02
TOP3B-202ENST00000398793 CCDC93Q567U6 631 aa15.2■□□□□ 0.02
TOP3B-202ENST00000398793 CDC42EP5Q6NZY7 148 aa15.2■□□□□ 0.02
TOP3B-202ENST00000398793 MTFR1LQ9H019 292 aa15.2■□□□□ 0.02
TOP3B-202ENST00000398793 APOA5Q6Q788 366 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 AMOTL1Q8IY63 956 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 NIM1KQ8IY84 436 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 ESR2Q92731 530 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 ZNF512BQ96KM6 892 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-202ENST00000398793 MROH7-TTC4A0A0A0MT08 1334 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 SPECC1Q5M775 1068 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 ENAHQ8N8S7 591 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-202ENST00000398793 GPCPD1Q9NPB8 672 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 V9GY48 417 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-202ENST00000398793 RPAP1Q9BWH6 1393 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-202ENST00000398793 DDTLA6NHG4 134 aaPredicted RBP15.19■□□□□ 0.02
TOP3B-202ENST00000398793 SLC16A2P36021 539 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 NUCB2P80303 420 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 SART3Q15020 963 aaKnown RBP15.19■□□□□ 0.02
TOP3B-202ENST00000398793 USP17L2Q6R6M4 530 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 IQCA1Q86XH1 822 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 STAG2Q8N3U4 1231 aa15.19■□□□□ 0.02
TOP3B-202ENST00000398793 GPKOWQ92917 476 aaPredicted RBP eCLIP15.19■□□□□ 0.02
TOP3B-202ENST00000398793 BAZ2AQ9UIF9 1905 aaKnown RBP15.18■□□□□ 0.02
TOP3B-202ENST00000398793 AKAP11Q9UKA4 1901 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 LDHCP07864 332 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 CXCL9Q07325 125 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 ANKRD1Q15327 319 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 NSUN7Q8NE18 718 aaKnown RBP15.18■□□□□ 0.02
TOP3B-202ENST00000398793 TM6SF1Q9BZW5 370 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 TMEM39BQ9GZU3 492 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 VPS54Q9P1Q0 977 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 FLT1P17948 1338 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 DGKZQ13574 1117 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 ZRSR1Q15695 479 aaKnown RBP15.18■□□□□ 0.02
TOP3B-202ENST00000398793 USP48Q86UV5 1035 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 TAOK3Q9H2K8 898 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 CACNA1SQ13698 1873 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 SLX4Q8IY92 1834 aa15.18■□□□□ 0.02
TOP3B-202ENST00000398793 LY75O60449 1722 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 MARCKSP29966 332 aaPredicted RBP15.17■□□□□ 0.02
TOP3B-202ENST00000398793 NBPF11Q86T75 865 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 NUP88Q99567 741 aaPredicted RBP15.17■□□□□ 0.02
TOP3B-202ENST00000398793 LY9Q9HBG7 655 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 CALCOCO1Q9P1Z2 691 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 MTMR6Q9Y217 621 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 ZSCAN22P10073 491 aaPredicted RBP15.17■□□□□ 0.02
TOP3B-202ENST00000398793 RASGRP4Q8TDF6 673 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 HPS5Q9UPZ3 1129 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 N4BP2Q86UW6 1770 aaPredicted RBP15.17■□□□□ 0.02
TOP3B-202ENST00000398793 GOLGA6L4A6NEF3 574 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 IL1R1P14778 569 aa15.17■□□□□ 0.02
TOP3B-202ENST00000398793 PDE4BQ07343 736 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms