RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 TFAP4Q01664 338 aa19.59■□□□□ 0.73
CDH23-204ENST00000398792 TNFAIP1Q13829 316 aa19.59■□□□□ 0.73
CDH23-204ENST00000398792 SEC23AQ15436 765 aa19.59■□□□□ 0.73
CDH23-204ENST00000398792 DPY19L2Q6NUT2 758 aa19.59■□□□□ 0.73
CDH23-204ENST00000398792 ZNF444Q8N0Y2 327 aaPredicted RBP19.59■□□□□ 0.73
CDH23-204ENST00000398792 CRACR2BQ8N4Y2 399 aaPredicted RBP19.59■□□□□ 0.73
CDH23-204ENST00000398792 CSRNP1Q96S65 589 aa19.59■□□□□ 0.73
CDH23-204ENST00000398792 SENP2Q9HC62 589 aa19.59■□□□□ 0.73
CDH23-204ENST00000398792 HACL1Q9UJ83 578 aa19.59■□□□□ 0.73
CDH23-204ENST00000398792 KLF18A0A0U1RQI7 1052 aa19.58■□□□□ 0.73
CDH23-204ENST00000398792 TSPY3P0CV98 308 aa19.58■□□□□ 0.73
CDH23-204ENST00000398792 TSPY8P0CW00 308 aa19.58■□□□□ 0.73
CDH23-204ENST00000398792 WTAPQ15007 396 aa19.58■□□□□ 0.73
CDH23-204ENST00000398792 METTL16Q86W50 562 aaKnown RBP19.58■□□□□ 0.73
CDH23-204ENST00000398792 ZNF274Q96GC6 653 aaPredicted RBP19.58■□□□□ 0.73
CDH23-204ENST00000398792 ADARB2Q9NS39 739 aaKnown RBP19.58■□□□□ 0.73
CDH23-204ENST00000398792 FOXD4L1Q9NU39 408 aa19.58■□□□□ 0.73
CDH23-204ENST00000398792 BRPF3Q9ULD4 1205 aa19.58■□□□□ 0.73
CDH23-204ENST00000398792 GREB1LQ9C091 1923 aaPredicted RBP19.58■□□□□ 0.73
CDH23-204ENST00000398792 CCDC83Q8IWF9 413 aa19.58■□□□□ 0.72
CDH23-204ENST00000398792 ENAHQ8N8S7 591 aaPredicted RBP19.58■□□□□ 0.72
CDH23-204ENST00000398792 GTF3C6Q969F1 213 aa19.58■□□□□ 0.72
CDH23-204ENST00000398792 INTS4Q96HW7 963 aaKnown RBP19.58■□□□□ 0.72
CDH23-204ENST00000398792 TMEM39BQ9GZU3 492 aa19.58■□□□□ 0.72
CDH23-204ENST00000398792 GLTPD2A6NH11 291 aa19.57■□□□□ 0.72
CDH23-204ENST00000398792 GOLGA8BA8MQT2 603 aa19.57■□□□□ 0.72
CDH23-204ENST00000398792 PFKFB2O60825 505 aa19.57■□□□□ 0.72
CDH23-204ENST00000398792 SLURP2P0DP57 97 aa19.57■□□□□ 0.72
CDH23-204ENST00000398792 STK3Q13188 491 aa19.57■□□□□ 0.72
CDH23-204ENST00000398792 FOXP4Q8IVH2 680 aaPredicted RBP19.57■□□□□ 0.72
CDH23-204ENST00000398792 NECAB1Q8N987 351 aa19.57■□□□□ 0.72
CDH23-204ENST00000398792 TRIM34Q9BYJ4 488 aa19.57■□□□□ 0.72
CDH23-204ENST00000398792 SLKQ9H2G2 1235 aaPredicted RBP19.57■□□□□ 0.72
CDH23-204ENST00000398792 PGAP2Q9UHJ9 254 aa19.57■□□□□ 0.72
CDH23-204ENST00000398792 WDR90Q96KV7 1748 aa19.56■□□□□ 0.72
CDH23-204ENST00000398792 FAM196BA6NMK8 535 aa19.56■□□□□ 0.72
CDH23-204ENST00000398792 NMT2O60551 498 aa19.56■□□□□ 0.72
CDH23-204ENST00000398792 PDIA3P30101 505 aaKnown RBP19.56■□□□□ 0.72
CDH23-204ENST00000398792 HIRAP54198 1017 aaPredicted RBP19.56■□□□□ 0.72
CDH23-204ENST00000398792 RASA3Q14644 834 aa19.56■□□□□ 0.72
CDH23-204ENST00000398792 APOA5Q6Q788 366 aa19.56■□□□□ 0.72
CDH23-204ENST00000398792 NFXL1Q6ZNB6 911 aa19.56■□□□□ 0.72
CDH23-204ENST00000398792 APOBEC3FQ8IUX4 373 aaKnown RBP19.56■□□□□ 0.72
CDH23-204ENST00000398792 CDAN1Q8IWY9 1227 aa19.56■□□□□ 0.72
CDH23-204ENST00000398792 NEDD1Q8NHV4 660 aa19.56■□□□□ 0.72
CDH23-204ENST00000398792 TCP11L1Q9NUJ3 509 aa19.56■□□□□ 0.72
CDH23-204ENST00000398792 HERC5Q9UII4 1024 aaKnown RBP19.56■□□□□ 0.72
CDH23-204ENST00000398792 NAP1L2Q9ULW6 460 aaPredicted RBP19.56■□□□□ 0.72
CDH23-204ENST00000398792 SCN4AP35499 1836 aa19.55■□□□□ 0.72
CDH23-204ENST00000398792 CCDC69A6NI79 296 aa19.55■□□□□ 0.72
CDH23-204ENST00000398792 ANGEL2Q5VTE6 544 aaKnown RBP19.55■□□□□ 0.72
CDH23-204ENST00000398792 TMTC2Q8N394 836 aa19.55■□□□□ 0.72
CDH23-204ENST00000398792 IL17RBQ9NRM6 502 aa19.55■□□□□ 0.72
CDH23-204ENST00000398792 GGA3Q9NZ52 723 aa19.55■□□□□ 0.72
CDH23-204ENST00000398792 NID2Q14112 1375 aa19.55■□□□□ 0.72
CDH23-204ENST00000398792 AKR1B1P15121 316 aa19.54■□□□□ 0.72
CDH23-204ENST00000398792 SCRN1Q12765 414 aa19.54■□□□□ 0.72
CDH23-204ENST00000398792 CCDC178Q5BJE1 867 aa19.54■□□□□ 0.72
CDH23-204ENST00000398792 IFIT1BQ5T764 474 aaKnown RBP19.54■□□□□ 0.72
CDH23-204ENST00000398792 TATDN1Q6P1N9 297 aa19.54■□□□□ 0.72
CDH23-204ENST00000398792 SCAF8Q9UPN6 1271 aaKnown RBP19.54■□□□□ 0.72
CDH23-204ENST00000398792 HPS5Q9UPZ3 1129 aa19.54■□□□□ 0.72
CDH23-204ENST00000398792 DDIT3P35638 169 aa19.54■□□□□ 0.72
CDH23-204ENST00000398792 RCSD1Q6JBY9 416 aa19.54■□□□□ 0.72
CDH23-204ENST00000398792 TEPSINQ96N21 525 aa19.54■□□□□ 0.72
CDH23-204ENST00000398792 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.54■□□□□ 0.72
CDH23-204ENST00000398792 SLC12A7Q9Y666 1083 aa19.54■□□□□ 0.72
CDH23-204ENST00000398792 PITPNM2Q9BZ72 1349 aa19.53■□□□□ 0.72
CDH23-204ENST00000398792 MICU3Q86XE3 530 aa19.53■□□□□ 0.72
CDH23-204ENST00000398792 DGKHQ86XP1 1220 aa19.53■□□□□ 0.72
CDH23-204ENST00000398792 ZNF654Q8IZM8 581 aa19.53■□□□□ 0.72
CDH23-204ENST00000398792 CCDC17Q96LX7 622 aa19.53■□□□□ 0.72
CDH23-204ENST00000398792 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.53■□□□□ 0.72
CDH23-204ENST00000398792 DEFB129Q9H1M3 183 aa19.53■□□□□ 0.72
CDH23-204ENST00000398792 IGKV6D-41A0A0C4DH26 115 aa19.52■□□□□ 0.72
CDH23-204ENST00000398792 ZBTB43O43298 467 aa19.52■□□□□ 0.72
CDH23-204ENST00000398792 RCAN1P53805 252 aa19.52■□□□□ 0.72
CDH23-204ENST00000398792 CCT2P78371 535 aaKnown RBP19.52■□□□□ 0.72
CDH23-204ENST00000398792 RAB11FIP4Q86YS3 637 aa19.52■□□□□ 0.72
CDH23-204ENST00000398792 ANKS1AQ92625 1134 aa19.52■□□□□ 0.72
CDH23-204ENST00000398792 MYL10Q9BUA6 226 aa19.52■□□□□ 0.72
CDH23-204ENST00000398792 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.52■□□□□ 0.72
CDH23-204ENST00000398792 NCOA5Q9HCD5 579 aaKnown RBP19.52■□□□□ 0.72
CDH23-204ENST00000398792 TBC1D12O60347 775 aa19.51■□□□□ 0.71
CDH23-204ENST00000398792 NOVP48745 357 aa19.51■□□□□ 0.71
CDH23-204ENST00000398792 METAP2P50579 478 aaKnown RBP eCLIP19.51■□□□□ 0.71
CDH23-204ENST00000398792 CERKLQ49MI3 558 aaPredicted RBP19.51■□□□□ 0.71
CDH23-204ENST00000398792 CEP95Q96GE4 821 aa19.51■□□□□ 0.71
CDH23-204ENST00000398792 CWC22Q9HCG8 908 aaKnown RBP19.51■□□□□ 0.71
CDH23-204ENST00000398792 GOLGA8AA7E2F4 631 aa19.51■□□□□ 0.71
CDH23-204ENST00000398792 RXRAP19793 462 aa19.51■□□□□ 0.71
CDH23-204ENST00000398792 EPHX2P34913 555 aa19.51■□□□□ 0.71
CDH23-204ENST00000398792 SYNE3Q6ZMZ3 975 aa19.51■□□□□ 0.71
CDH23-204ENST00000398792 PPP2R3BQ9Y5P8 575 aa19.51■□□□□ 0.71
CDH23-204ENST00000398792 IQCA1LA6NCM1 817 aa19.5■□□□□ 0.71
CDH23-204ENST00000398792 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
CDH23-204ENST00000398792 DDAH1O94760 285 aa19.5■□□□□ 0.71
CDH23-204ENST00000398792 MAP3K10Q02779 954 aa19.5■□□□□ 0.71
CDH23-204ENST00000398792 USP50Q70EL3 339 aaPredicted RBP19.5■□□□□ 0.71
CDH23-204ENST00000398792 CATIPQ7Z7H3 387 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms