RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 CCDC50Q8IVM0 306 aa16.96■□□□□ 0.31
CYLD-202ENST00000398568 CAGE1Q8TC20 777 aa16.96■□□□□ 0.31
CYLD-202ENST00000398568 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
CYLD-202ENST00000398568 PCDHA5Q9Y5H7 936 aa16.96■□□□□ 0.31
CYLD-202ENST00000398568 CRYBG1Q9Y4K1 1723 aa16.96■□□□□ 0.3
CYLD-202ENST00000398568 GOLGA6L7A0A1B0GV03 622 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 SMTNP53814 917 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 PHRF1Q9P1Y6 1649 aaKnown RBP16.95■□□□□ 0.3
CYLD-202ENST00000398568 CPDO75976 1380 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 SLIT3O75094 1523 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 PEAK1Q9H792 1746 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 SRCAPQ6ZRS2 3230 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
CYLD-202ENST00000398568 RBL2Q08999 1139 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 SNCBQ16143 134 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 TARSL2A2RTX5 802 aaKnown RBP16.95■□□□□ 0.3
CYLD-202ENST00000398568 ZMYND10O75800 440 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 GBP2P32456 591 aaPredicted RBP16.95■□□□□ 0.3
CYLD-202ENST00000398568 CKAP4Q07065 602 aaKnown RBP16.95■□□□□ 0.3
CYLD-202ENST00000398568 TEFQ10587 303 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 C11orf91Q3C1V1 193 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 FNBP4Q8N3X1 1017 aaPredicted RBP16.95■□□□□ 0.3
CYLD-202ENST00000398568 ACRBPQ8NEB7 543 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 EAF2Q96CJ1 260 aaPredicted RBP16.95■□□□□ 0.3
CYLD-202ENST00000398568 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.95■□□□□ 0.3
CYLD-202ENST00000398568 LTN1O94822 1766 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 RGPD5Q99666 1765 aa16.95■□□□□ 0.3
CYLD-202ENST00000398568 FRMD3A2A2Y4 597 aa16.94■□□□□ 0.3
CYLD-202ENST00000398568 ZEB2O60315 1214 aa16.94■□□□□ 0.3
CYLD-202ENST00000398568 FILIP1LQ4L180 1135 aa16.94■□□□□ 0.3
CYLD-202ENST00000398568 WLSQ5T9L3 541 aa16.94■□□□□ 0.3
CYLD-202ENST00000398568 XAGE2Q96GT9 111 aa16.94■□□□□ 0.3
CYLD-202ENST00000398568 ABCC6O95255 1503 aa16.94■□□□□ 0.3
CYLD-202ENST00000398568 PDE4BQ07343 736 aa16.94■□□□□ 0.3
CYLD-202ENST00000398568 GRIN2DO15399 1336 aa16.94■□□□□ 0.3
CYLD-202ENST00000398568 AGPSO00116 658 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 AP1ARQ63HQ0 302 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 RPGRIP1Q96KN7 1286 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 CCDC114Q96M63 670 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 PI4KAP2A4QPH2 592 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 SF3B2Q13435 895 aaKnown RBP16.93■□□□□ 0.3
CYLD-202ENST00000398568 NBPF14Q5TI25 921 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 CNGA4Q8IV77 575 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 TRMT44Q8IYL2 757 aaKnown RBP16.93■□□□□ 0.3
CYLD-202ENST00000398568 PI4KAP1Q8N8J0 262 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 ENOX1Q8TC92 643 aaKnown RBP16.93■□□□□ 0.3
CYLD-202ENST00000398568 BCL9LQ86UU0 1499 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 PDIA3P30101 505 aaKnown RBP16.93■□□□□ 0.3
CYLD-202ENST00000398568 PDCLQ13371 301 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 NR1I3Q14994 352 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 SLC39A14Q15043 492 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 TMTC1Q8IUR5 882 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 GSPT2Q8IYD1 628 aaKnown RBP16.93■□□□□ 0.3
CYLD-202ENST00000398568 MLKLQ8NB16 471 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 ZNF274Q96GC6 653 aaPredicted RBP16.93■□□□□ 0.3
CYLD-202ENST00000398568 GJD4Q96KN9 370 aaPredicted RBP16.93■□□□□ 0.3
CYLD-202ENST00000398568 SCLT1Q96NL6 688 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 MROH7-TTC4A0A0A0MT08 1334 aa16.93■□□□□ 0.3
CYLD-202ENST00000398568 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
CYLD-202ENST00000398568 COL5A2P05997 1499 aaPredicted RBP16.92■□□□□ 0.3
CYLD-202ENST00000398568 GCKP35557 465 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 SND1Q7KZF4 910 aaKnown RBP eCLIP16.92■□□□□ 0.3
CYLD-202ENST00000398568 ARMC2Q8NEN0 867 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 VCPKMTQ9H867 229 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 SPATS2LQ9NUQ6 558 aaKnown RBP16.92■□□□□ 0.3
CYLD-202ENST00000398568 TRPC5Q9UL62 973 aaPredicted RBP16.92■□□□□ 0.3
CYLD-202ENST00000398568 CCDC129Q6ZRS4 1044 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 CPLX1O14810 134 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 PLCB4Q15147 1175 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 CCNI2Q6ZMN8 369 aaPredicted RBP16.92■□□□□ 0.3
CYLD-202ENST00000398568 CAPZA3Q96KX2 299 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 GUCA1BQ9UMX6 200 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 MYH15Q9Y2K3 1946 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 SALL1Q9NSC2 1324 aa16.92■□□□□ 0.3
CYLD-202ENST00000398568 ZNF18P17022 549 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 CCDC51Q96ER9 411 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 TAOK2Q9UL54 1235 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 IQCEQ6IPM2 695 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 YTHDF3Q7Z739 585 aaKnown RBP16.91■□□□□ 0.3
CYLD-202ENST00000398568 SH3GL2Q99962 352 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 SLC40A1Q9NP59 571 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 SAMSN1Q9NSI8 373 aaKnown RBP16.91■□□□□ 0.3
CYLD-202ENST00000398568 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 SAR1BQ9Y6B6 198 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 KLHL33A6NCF5 533 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 HSF2BPO75031 334 aa16.91■□□□□ 0.3
CYLD-202ENST00000398568 METTL16Q86W50 562 aaKnown RBP16.91■□□□□ 0.3
CYLD-202ENST00000398568 CALR3Q96L12 384 aaKnown RBP16.91■□□□□ 0.3
CYLD-202ENST00000398568 TEX13AQ9BXU3 409 aaPredicted RBP16.91■□□□□ 0.3
CYLD-202ENST00000398568 MFAP3LO75121 409 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 SSBP05455 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
CYLD-202ENST00000398568 AMPD2Q01433 879 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 MCMDC2Q4G0Z9 681 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 EDC3Q96F86 508 aaKnown RBP16.9■□□□□ 0.3
CYLD-202ENST00000398568 TLR7Q9NYK1 1049 aaKnown RBP16.9■□□□□ 0.3
CYLD-202ENST00000398568 IRF6O14896 467 aa16.9■□□□□ 0.3
CYLD-202ENST00000398568 FDPSP14324 419 aaKnown RBP16.9■□□□□ 0.3
CYLD-202ENST00000398568 CDC27P30260 824 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms