RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PICK1Q9NRD5 415 aa30.55■■■□□ 2.48
U2AF1-203ENST00000398137 LACTBP83111 547 aaPredicted RBP30.54■■■□□ 2.48
U2AF1-203ENST00000398137 CERS3Q8IU89 383 aa30.54■■■□□ 2.48
U2AF1-203ENST00000398137 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.54■■■□□ 2.48
U2AF1-203ENST00000398137 CPA4Q9UI42 421 aa30.54■■■□□ 2.48
U2AF1-203ENST00000398137 M0R2C6 588 aa30.53■■■□□ 2.48
U2AF1-203ENST00000398137 ZMYM1Q5SVZ6 1142 aa30.53■■■□□ 2.48
U2AF1-203ENST00000398137 TGFBRAP1Q8WUH2 860 aa30.53■■■□□ 2.48
U2AF1-203ENST00000398137 FLT1P17948 1338 aa30.52■■■□□ 2.48
U2AF1-203ENST00000398137 SEC62Q99442 399 aaKnown RBP30.52■■■□□ 2.48
U2AF1-203ENST00000398137 DNAJC18Q9H819 358 aa30.52■■■□□ 2.48
U2AF1-203ENST00000398137 BMP2KLQ5H9B9 411 aa30.51■■■□□ 2.47
U2AF1-203ENST00000398137 MAPKAPK5Q8IW41 473 aa30.51■■■□□ 2.47
U2AF1-203ENST00000398137 ARMC5Q96C12 935 aa30.51■■■□□ 2.47
U2AF1-203ENST00000398137 FAM227BQ96M60 508 aa30.51■■■□□ 2.47
U2AF1-203ENST00000398137 CRNKL1Q9BZJ0 848 aaKnown RBP30.51■■■□□ 2.47
U2AF1-203ENST00000398137 DIAPH3Q9NSV4 1193 aa30.51■■■□□ 2.47
U2AF1-203ENST00000398137 PTCH2Q9Y6C5 1203 aa30.51■■■□□ 2.47
U2AF1-203ENST00000398137 RBBP6Q7Z6E9 1792 aaKnown RBP30.51■■■□□ 2.47
U2AF1-203ENST00000398137 A0A0D9SFI3 127 aa30.5■■■□□ 2.47
U2AF1-203ENST00000398137 CYP2C8P10632 490 aa30.5■■■□□ 2.47
U2AF1-203ENST00000398137 NMIQ13287 307 aaPredicted RBP30.5■■■□□ 2.47
U2AF1-203ENST00000398137 TICAM2Q86XR7 235 aa30.5■■■□□ 2.47
U2AF1-203ENST00000398137 USP5P45974 858 aa30.49■■■□□ 2.47
U2AF1-203ENST00000398137 JAG1P78504 1218 aa30.49■■■□□ 2.47
U2AF1-203ENST00000398137 METTL16Q86W50 562 aaKnown RBP30.49■■■□□ 2.47
U2AF1-203ENST00000398137 PI4KBQ9UBF8 816 aa30.49■■■□□ 2.47
U2AF1-203ENST00000398137 MKI67P46013 3256 aaKnown RBP30.48■■■□□ 2.47
U2AF1-203ENST00000398137 POTEFA5A3E0 1075 aa30.48■■■□□ 2.47
U2AF1-203ENST00000398137 TRIM75PA6NK02 468 aa30.48■■■□□ 2.47
U2AF1-203ENST00000398137 GPAA1O43292 621 aa30.48■■■□□ 2.47
U2AF1-203ENST00000398137 CAP2P40123 477 aa30.48■■■□□ 2.47
U2AF1-203ENST00000398137 LOC285556D6RIA3 1793 aa30.48■■■□□ 2.47
U2AF1-203ENST00000398137 PRKAB2O43741 272 aa30.47■■■□□ 2.47
U2AF1-203ENST00000398137 BCRP11274 1271 aa30.47■■■□□ 2.47
U2AF1-203ENST00000398137 CCDC129Q6ZRS4 1044 aa30.47■■■□□ 2.47
U2AF1-203ENST00000398137 FASTKD5Q7L8L6 764 aaKnown RBP30.47■■■□□ 2.47
U2AF1-203ENST00000398137 DHX36Q9H2U1 1008 aaKnown RBP30.47■■■□□ 2.47
U2AF1-203ENST00000398137 HERC5Q9UII4 1024 aaKnown RBP30.47■■■□□ 2.47
U2AF1-203ENST00000398137 PALD1Q9ULE6 856 aa30.47■■■□□ 2.47
U2AF1-203ENST00000398137 MYH1P12882 1939 aa30.47■■■□□ 2.47
U2AF1-203ENST00000398137 HIP1O00291 1037 aa30.46■■■□□ 2.47
U2AF1-203ENST00000398137 ECM2O94769 699 aaPredicted RBP30.46■■■□□ 2.47
U2AF1-203ENST00000398137 SHROOM1Q2M3G4 852 aaPredicted RBP30.46■■■□□ 2.47
U2AF1-203ENST00000398137 GADL1Q6ZQY3 521 aa30.46■■■□□ 2.47
U2AF1-203ENST00000398137 SDR42E1Q8WUS8 393 aa30.46■■■□□ 2.47
U2AF1-203ENST00000398137 STRBPQ96SI9 672 aaKnown RBP30.46■■■□□ 2.47
U2AF1-203ENST00000398137 HELLSQ9NRZ9 838 aa30.46■■■□□ 2.47
U2AF1-203ENST00000398137 MGAMO43451 1857 aa30.46■■■□□ 2.47
U2AF1-203ENST00000398137 NAV1Q8NEY1 1877 aa30.46■■■□□ 2.47
U2AF1-203ENST00000398137 TRIM47Q96LD4 638 aa30.45■■■□□ 2.47
U2AF1-203ENST00000398137 PARK7Q99497 189 aaKnown RBP30.45■■■□□ 2.47
U2AF1-203ENST00000398137 SAP30BPQ9UHR5 308 aaKnown RBP30.45■■■□□ 2.47
U2AF1-203ENST00000398137 SLC4A4Q9Y6R1 1079 aa30.45■■■□□ 2.47
U2AF1-203ENST00000398137 TREML2Q5T2D2 321 aa30.44■■■□□ 2.46
U2AF1-203ENST00000398137 CWC27Q6UX04 472 aaKnown RBP30.44■■■□□ 2.46
U2AF1-203ENST00000398137 ZNF333Q96JL9 665 aa30.44■■■□□ 2.46
U2AF1-203ENST00000398137 SLC45A1Q9Y2W3 748 aa30.44■■■□□ 2.46
U2AF1-203ENST00000398137 DDX60LQ5H9U9 1706 aaKnown RBP30.44■■■□□ 2.46
U2AF1-203ENST00000398137 SPP2Q13103 211 aa30.43■■■□□ 2.46
U2AF1-203ENST00000398137 ARHGEF6Q15052 776 aa30.43■■■□□ 2.46
U2AF1-203ENST00000398137 MCMDC2Q4G0Z9 681 aa30.43■■■□□ 2.46
U2AF1-203ENST00000398137 KIAA0100Q14667 2235 aaKnown RBP30.43■■■□□ 2.46
U2AF1-203ENST00000398137 CHMLP26374 656 aa30.42■■■□□ 2.46
U2AF1-203ENST00000398137 PSMC4P43686 418 aa30.42■■■□□ 2.46
U2AF1-203ENST00000398137 KIF22Q14807 665 aa30.42■■■□□ 2.46
U2AF1-203ENST00000398137 ZNF589Q86UQ0 364 aaPredicted RBP30.42■■■□□ 2.46
U2AF1-203ENST00000398137 ZNF280CQ8ND82 737 aa30.42■■■□□ 2.46
U2AF1-203ENST00000398137 AGTPBP1Q9UPW5 1226 aa30.42■■■□□ 2.46
U2AF1-203ENST00000398137 SLC4A8Q2Y0W8 1093 aa30.41■■■□□ 2.46
U2AF1-203ENST00000398137 FOXP4Q8IVH2 680 aaPredicted RBP30.41■■■□□ 2.46
U2AF1-203ENST00000398137 DCP1AQ9NPI6 582 aaPredicted RBP30.41■■■□□ 2.46
U2AF1-203ENST00000398137 PDE4DIPQ5VU43 2346 aa30.41■■■□□ 2.46
U2AF1-203ENST00000398137 GNRH1P01148 92 aa30.4■■■□□ 2.46
U2AF1-203ENST00000398137 OSBPP22059 807 aa30.4■■■□□ 2.46
U2AF1-203ENST00000398137 CCDC171Q6TFL3 1326 aa30.4■■■□□ 2.46
U2AF1-203ENST00000398137 USP17L5A8MUK1 530 aa30.39■■■□□ 2.46
U2AF1-203ENST00000398137 GNAT2P19087 354 aa30.39■■■□□ 2.46
U2AF1-203ENST00000398137 SLC9C1Q4G0N8 1177 aa30.39■■■□□ 2.46
U2AF1-203ENST00000398137 ATP8A2Q9NTI2 1148 aa30.39■■■□□ 2.46
U2AF1-203ENST00000398137 SRRDQ9UH36 339 aa30.39■■■□□ 2.46
U2AF1-203ENST00000398137 GSG1L2A8MUP6 293 aa30.38■■■□□ 2.45
U2AF1-203ENST00000398137 PROCA1Q8NCQ7 364 aaPredicted RBP30.38■■■□□ 2.45
U2AF1-203ENST00000398137 SH3TC2Q8TF17 1288 aa30.38■■■□□ 2.45
U2AF1-203ENST00000398137 IL25Q9H293 177 aa30.38■■■□□ 2.45
U2AF1-203ENST00000398137 EPB41L4AQ9HCS5 686 aaPredicted RBP30.38■■■□□ 2.45
U2AF1-203ENST00000398137 MCM9Q9NXL9 1143 aa30.38■■■□□ 2.45
U2AF1-203ENST00000398137 HMGCS2P54868 508 aa30.37■■■□□ 2.45
U2AF1-203ENST00000398137 SH3D19Q5HYK7 790 aa30.37■■■□□ 2.45
U2AF1-203ENST00000398137 VPS53Q5VIR6 699 aa30.37■■■□□ 2.45
U2AF1-203ENST00000398137 DDRGK1Q96HY6 314 aa30.37■■■□□ 2.45
U2AF1-203ENST00000398137 WDR18Q9BV38 432 aa30.37■■■□□ 2.45
U2AF1-203ENST00000398137 TBC1D2Q9BYX2 928 aa30.37■■■□□ 2.45
U2AF1-203ENST00000398137 BAZ2AQ9UIF9 1905 aaKnown RBP30.36■■■□□ 2.45
U2AF1-203ENST00000398137 GDF11O95390 407 aa30.36■■■□□ 2.45
U2AF1-203ENST00000398137 APPP05067 770 aa30.36■■■□□ 2.45
U2AF1-203ENST00000398137 PRMT2P55345 433 aa30.36■■■□□ 2.45
U2AF1-203ENST00000398137 RUFY2Q8WXA3 655 aa30.36■■■□□ 2.45
U2AF1-203ENST00000398137 FOXP2O15409 715 aa30.35■■■□□ 2.45
U2AF1-203ENST00000398137 CDC45O75419 566 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms