RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 UNC80Q8N2C7 3258 aa19.86■□□□□ 0.77
CUX2-202ENST00000397643 FOCADQ5VW36 1801 aa19.86■□□□□ 0.77
CUX2-202ENST00000397643 HERVK_113P62684 666 aa19.85■□□□□ 0.77
CUX2-202ENST00000397643 IRX3P78415 501 aaPredicted RBP19.85■□□□□ 0.77
CUX2-202ENST00000397643 SOCS4Q8WXH5 440 aa19.85■□□□□ 0.77
CUX2-202ENST00000397643 ASNSP08243 561 aa19.84■□□□□ 0.77
CUX2-202ENST00000397643 GPRC5AQ8NFJ5 357 aa19.84■□□□□ 0.77
CUX2-202ENST00000397643 NUDT12Q9BQG2 462 aa19.84■□□□□ 0.77
CUX2-202ENST00000397643 MTMR10Q9NXD2 777 aa19.84■□□□□ 0.77
CUX2-202ENST00000397643 RBPJLQ9UBG7 517 aa19.84■□□□□ 0.77
CUX2-202ENST00000397643 STXBP5LQ9Y2K9 1186 aa19.84■□□□□ 0.77
CUX2-202ENST00000397643 FLT1P17948 1338 aa19.83■□□□□ 0.77
CUX2-202ENST00000397643 GNAI3P08754 354 aa19.83■□□□□ 0.77
CUX2-202ENST00000397643 CACNB2Q08289 660 aaPredicted RBP19.83■□□□□ 0.77
CUX2-202ENST00000397643 Q3C1V9 767 aa19.83■□□□□ 0.77
CUX2-202ENST00000397643 LHX8Q68G74 356 aa19.83■□□□□ 0.77
CUX2-202ENST00000397643 ADGRA1Q86SQ6 560 aa19.83■□□□□ 0.77
CUX2-202ENST00000397643 PORCNQ9H237 461 aa19.83■□□□□ 0.77
CUX2-202ENST00000397643 DHX36Q9H2U1 1008 aaKnown RBP19.83■□□□□ 0.77
CUX2-202ENST00000397643 TMOD4Q9NZQ9 345 aa19.83■□□□□ 0.77
CUX2-202ENST00000397643 FRMPD3Q5JV73 1810 aa19.83■□□□□ 0.76
CUX2-202ENST00000397643 HNRNPUQ00839 825 aaKnown RBP eCLIP19.82■□□□□ 0.76
CUX2-202ENST00000397643 CCL14Q16627 93 aa19.82■□□□□ 0.76
CUX2-202ENST00000397643 MORN1Q5T089 497 aa19.82■□□□□ 0.76
CUX2-202ENST00000397643 UBE2OQ9C0C9 1292 aaKnown RBP19.82■□□□□ 0.76
CUX2-202ENST00000397643 AATFQ9NY61 560 aaKnown RBP eCLIP19.82■□□□□ 0.76
CUX2-202ENST00000397643 C19orf81C9J6K1 198 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 GDF11O95390 407 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 ZKSCAN1P17029 563 aaPredicted RBP19.81■□□□□ 0.76
CUX2-202ENST00000397643 CCND3P30281 292 aaPredicted RBP19.81■□□□□ 0.76
CUX2-202ENST00000397643 MAPK4P31152 587 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 RARSP54136 660 aaKnown RBP19.81■□□□□ 0.76
CUX2-202ENST00000397643 PPP4CP60510 307 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 ERVK-9P63128 1117 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 ERVK-24P63145 666 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 LRRC26Q2I0M4 334 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 GORABQ5T7V8 394 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 GPR142Q7Z601 462 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 MAPKAPK5Q8IW41 473 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 TGFBRAP1Q8WUH2 860 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 LRP2BPQ9P2M1 347 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 ZBTB21Q9ULJ3 1066 aa19.81■□□□□ 0.76
CUX2-202ENST00000397643 LAMA2P24043 3122 aaKnown RBP19.8■□□□□ 0.76
CUX2-202ENST00000397643 PNMA6EA0A0J9YXQ4 647 aa19.8■□□□□ 0.76
CUX2-202ENST00000397643 USP17L10C9JJH3 530 aa19.8■□□□□ 0.76
CUX2-202ENST00000397643 UQCRFS1P1P0C7P4 283 aa19.8■□□□□ 0.76
CUX2-202ENST00000397643 TRMT44Q8IYL2 757 aaKnown RBP19.8■□□□□ 0.76
CUX2-202ENST00000397643 ARHGAP45Q92619 1136 aa19.8■□□□□ 0.76
CUX2-202ENST00000397643 EMILIN3Q9NT22 766 aa19.8■□□□□ 0.76
CUX2-202ENST00000397643 GINM1Q9NU53 330 aa19.8■□□□□ 0.76
CUX2-202ENST00000397643 MYO5AQ9Y4I1 1855 aaKnown RBP19.79■□□□□ 0.76
CUX2-202ENST00000397643 DNAH12Q6ZR08 3092 aa19.79■□□□□ 0.76
CUX2-202ENST00000397643 PDE3AQ14432 1141 aa19.79■□□□□ 0.76
CUX2-202ENST00000397643 NAA16Q6N069 864 aaPredicted RBP19.79■□□□□ 0.76
CUX2-202ENST00000397643 FOXP4Q8IVH2 680 aaPredicted RBP19.79■□□□□ 0.76
CUX2-202ENST00000397643 APBA2Q99767 749 aa19.79■□□□□ 0.76
CUX2-202ENST00000397643 SNRKQ9NRH2 765 aa19.79■□□□□ 0.76
CUX2-202ENST00000397643 PALD1Q9ULE6 856 aa19.79■□□□□ 0.76
CUX2-202ENST00000397643 BAG3O95817 575 aa19.78■□□□□ 0.76
CUX2-202ENST00000397643 PLCG2P16885 1265 aa19.78■□□□□ 0.76
CUX2-202ENST00000397643 RGS2P41220 211 aa19.78■□□□□ 0.76
CUX2-202ENST00000397643 GTF3C2Q8WUA4 911 aaPredicted RBP19.78■□□□□ 0.76
CUX2-202ENST00000397643 NOL10Q9BSC4 688 aaKnown RBP19.78■□□□□ 0.76
CUX2-202ENST00000397643 PAGR1Q9BTK6 254 aa19.78■□□□□ 0.76
CUX2-202ENST00000397643 CNMDO75829 334 aa19.77■□□□□ 0.76
CUX2-202ENST00000397643 CYP2E1P05181 493 aaPredicted RBP19.77■□□□□ 0.76
CUX2-202ENST00000397643 PLEKHH3Q7Z736 793 aa19.77■□□□□ 0.76
CUX2-202ENST00000397643 TNNQ9UQP3 1299 aa19.77■□□□□ 0.76
CUX2-202ENST00000397643 MDM2Q00987 491 aaPredicted RBP19.76■□□□□ 0.75
CUX2-202ENST00000397643 CRACR2BQ8N4Y2 399 aaPredicted RBP19.76■□□□□ 0.75
CUX2-202ENST00000397643 C12orf42Q96LP6 360 aa19.76■□□□□ 0.75
CUX2-202ENST00000397643 DBNDD2Q9BQY9 259 aa19.76■□□□□ 0.75
CUX2-202ENST00000397643 FLRT1Q9NZU1 646 aa19.76■□□□□ 0.75
CUX2-202ENST00000397643 VCANP13611 3396 aa19.75■□□□□ 0.75
CUX2-202ENST00000397643 GNAI2P04899 355 aa19.75■□□□□ 0.75
CUX2-202ENST00000397643 TRIM27P14373 513 aa19.75■□□□□ 0.75
CUX2-202ENST00000397643 MAP2K5Q13163 448 aa19.75■□□□□ 0.75
CUX2-202ENST00000397643 G3BP1Q13283 466 aaKnown RBP eCLIP19.75■□□□□ 0.75
CUX2-202ENST00000397643 USP17L2Q6R6M4 530 aa19.75■□□□□ 0.75
CUX2-202ENST00000397643 GPR108Q9NPR9 543 aa19.75■□□□□ 0.75
CUX2-202ENST00000397643 SAP30BPQ9UHR5 308 aaKnown RBP19.75■□□□□ 0.75
CUX2-202ENST00000397643 GH2P01242 217 aa19.74■□□□□ 0.75
CUX2-202ENST00000397643 TNNI3KQ59H18 835 aa19.74■□□□□ 0.75
CUX2-202ENST00000397643 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
CUX2-202ENST00000397643 GUCD1Q96NT3 240 aa19.74■□□□□ 0.75
CUX2-202ENST00000397643 TRIM34Q9BYJ4 488 aa19.74■□□□□ 0.75
CUX2-202ENST00000397643 PIH1D3Q9NQM4 214 aaKnown RBP19.74■□□□□ 0.75
CUX2-202ENST00000397643 FPGT-TNNI3KV9GXZ4 949 aa19.74■□□□□ 0.75
CUX2-202ENST00000397643 POTEB2H3BUK9 544 aa19.73■□□□□ 0.75
CUX2-202ENST00000397643 DYNLL1P63167 89 aaKnown RBP19.73■□□□□ 0.75
CUX2-202ENST00000397643 TTC39AQ5SRH9 613 aa19.73■□□□□ 0.75
CUX2-202ENST00000397643 TATDN1Q6P1N9 297 aa19.73■□□□□ 0.75
CUX2-202ENST00000397643 CCAR1Q8IX12 1150 aaKnown RBP19.73■□□□□ 0.75
CUX2-202ENST00000397643 ZNF512BQ96KM6 892 aaPredicted RBP19.73■□□□□ 0.75
CUX2-202ENST00000397643 RABGAP1Q9Y3P9 1069 aa19.73■□□□□ 0.75
CUX2-202ENST00000397643 LTBP2Q14767 1821 aa19.73■□□□□ 0.75
CUX2-202ENST00000397643 MYH1P12882 1939 aa19.72■□□□□ 0.75
CUX2-202ENST00000397643 IGHA2P01877 340 aa19.72■□□□□ 0.75
CUX2-202ENST00000397643 HLA-DOAP06340 250 aa19.72■□□□□ 0.75
CUX2-202ENST00000397643 ZAP70P43403 619 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms