RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 CYP2D7A0A087X1C5 515 aa30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 TESPA1A2RU30 521 aaPredicted RBP30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 HSPA8P11142 646 aaKnown RBP30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 ERICH6BQ5W0A0 696 aa30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 TATDN1Q6P1N9 297 aa30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 CCDC84Q86UT8 332 aaPredicted RBP30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 IFNL3Q8IZI9 196 aa30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 BRI3BPQ8WY22 251 aa30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 DYNLL2Q96FJ2 89 aa30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.33■■■□□ 2.45
TSPAN4-207ENST00000397411 MFAP1P55081 439 aaKnown RBP30.32■■■□□ 2.44
TSPAN4-207ENST00000397411 ABCB5Q2M3G0 1257 aa30.32■■■□□ 2.44
TSPAN4-207ENST00000397411 TBC1D2Q9BYX2 928 aa30.32■■■□□ 2.44
TSPAN4-207ENST00000397411 NAPBQ9H115 298 aa30.32■■■□□ 2.44
TSPAN4-207ENST00000397411 KCNH4Q9UQ05 1017 aa30.32■■■□□ 2.44
TSPAN4-207ENST00000397411 AFG3L2Q9Y4W6 797 aa30.32■■■□□ 2.44
TSPAN4-207ENST00000397411 A0A0D9SFI3 127 aa30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 TRIM75PA6NK02 468 aa30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 IGF2BP3O00425 579 aaKnown RBP eCLIP30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 TBC1D8O95759 1140 aa30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 SHMT1P34896 483 aa30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 EVX2Q03828 476 aa30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 GABPAQ06546 454 aa30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 SBK1Q52WX2 424 aa30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 TAOK2Q9UL54 1235 aa30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 ZBTB21Q9ULJ3 1066 aa30.31■■■□□ 2.44
TSPAN4-207ENST00000397411 DDX60LQ5H9U9 1706 aaKnown RBP30.3■■■□□ 2.44
TSPAN4-207ENST00000397411 MPHOSPH10O00566 681 aaKnown RBP30.3■■■□□ 2.44
TSPAN4-207ENST00000397411 GH2P01242 217 aa30.3■■■□□ 2.44
TSPAN4-207ENST00000397411 CWC27Q6UX04 472 aaKnown RBP30.3■■■□□ 2.44
TSPAN4-207ENST00000397411 STK11IPQ8N1F8 1099 aa30.3■■■□□ 2.44
TSPAN4-207ENST00000397411 ZNF280CQ8ND82 737 aa30.3■■■□□ 2.44
TSPAN4-207ENST00000397411 PTPN18Q99952 460 aa30.3■■■□□ 2.44
TSPAN4-207ENST00000397411 PPP4R2Q9NY27 417 aa30.3■■■□□ 2.44
TSPAN4-207ENST00000397411 GSPT1P15170 499 aaKnown RBP30.29■■■□□ 2.44
TSPAN4-207ENST00000397411 SPP2Q13103 211 aa30.29■■■□□ 2.44
TSPAN4-207ENST00000397411 GADL1Q6ZQY3 521 aa30.29■■■□□ 2.44
TSPAN4-207ENST00000397411 FASTKD5Q7L8L6 764 aaKnown RBP30.29■■■□□ 2.44
TSPAN4-207ENST00000397411 CDK8P49336 464 aa30.28■■■□□ 2.44
TSPAN4-207ENST00000397411 RAB3GAP1Q15042 981 aa30.28■■■□□ 2.44
TSPAN4-207ENST00000397411 SLC44A5Q8NCS7 719 aa30.28■■■□□ 2.44
TSPAN4-207ENST00000397411 EPB41L4AQ9HCS5 686 aaPredicted RBP30.28■■■□□ 2.44
TSPAN4-207ENST00000397411 JAG1P78504 1218 aa30.27■■■□□ 2.44
TSPAN4-207ENST00000397411 MKNK2Q9HBH9 465 aa30.27■■■□□ 2.44
TSPAN4-207ENST00000397411 PRDM10Q9NQV6 1147 aa30.27■■■□□ 2.44
TSPAN4-207ENST00000397411 MYH8P13535 1937 aa30.27■■■□□ 2.44
TSPAN4-207ENST00000397411 LAMB1P07942 1786 aa30.26■■■□□ 2.44
TSPAN4-207ENST00000397411 BTBD19C9JJ37 291 aa30.26■■■□□ 2.43
TSPAN4-207ENST00000397411 SLC3A2P08195 630 aaKnown RBP30.26■■■□□ 2.43
TSPAN4-207ENST00000397411 TAF1CQ15572 869 aaPredicted RBP30.26■■■□□ 2.43
TSPAN4-207ENST00000397411 SHROOM1Q2M3G4 852 aaPredicted RBP30.26■■■□□ 2.43
TSPAN4-207ENST00000397411 C16orf86Q6ZW13 317 aa30.26■■■□□ 2.43
TSPAN4-207ENST00000397411 CCDC171Q6TFL3 1326 aa30.25■■■□□ 2.43
TSPAN4-207ENST00000397411 A0A0G2JLL6 359 aaPredicted RBP30.25■■■□□ 2.43
TSPAN4-207ENST00000397411 PRRT2Q7Z6L0 340 aaPredicted RBP30.25■■■□□ 2.43
TSPAN4-207ENST00000397411 FAM43AQ8N2R8 423 aa30.25■■■□□ 2.43
TSPAN4-207ENST00000397411 WDR18Q9BV38 432 aa30.25■■■□□ 2.43
TSPAN4-207ENST00000397411 ZNF287Q9HBT7 754 aa30.25■■■□□ 2.43
TSPAN4-207ENST00000397411 ZFYVE28Q9HCC9 887 aa30.25■■■□□ 2.43
TSPAN4-207ENST00000397411 PCNTO95613 3336 aa30.25■■■□□ 2.43
TSPAN4-207ENST00000397411 PHIPQ8WWQ0 1821 aa30.24■■■□□ 2.43
TSPAN4-207ENST00000397411 SMIM22K7EJ46 135 aa30.24■■■□□ 2.43
TSPAN4-207ENST00000397411 ANKRD23Q86SG2 305 aa30.24■■■□□ 2.43
TSPAN4-207ENST00000397411 CCDC17Q96LX7 622 aa30.24■■■□□ 2.43
TSPAN4-207ENST00000397411 VPS53Q5VIR6 699 aa30.23■■■□□ 2.43
TSPAN4-207ENST00000397411 ZNF589Q86UQ0 364 aaPredicted RBP30.23■■■□□ 2.43
TSPAN4-207ENST00000397411 RUFY2Q8WXA3 655 aa30.23■■■□□ 2.43
TSPAN4-207ENST00000397411 TMOD4Q9NZQ9 345 aa30.23■■■□□ 2.43
TSPAN4-207ENST00000397411 HSPD1P10809 573 aaKnown RBP30.22■■■□□ 2.43
TSPAN4-207ENST00000397411 SKAP1Q86WV1 359 aa30.22■■■□□ 2.43
TSPAN4-207ENST00000397411 FEZ1Q99689 392 aa30.22■■■□□ 2.43
TSPAN4-207ENST00000397411 ZCCHC17Q9NP64 241 aaKnown RBP30.22■■■□□ 2.43
TSPAN4-207ENST00000397411 USP17L10C9JJH3 530 aa30.21■■■□□ 2.43
TSPAN4-207ENST00000397411 PDHXO00330 501 aa30.21■■■□□ 2.43
TSPAN4-207ENST00000397411 HMGCS2P54868 508 aa30.21■■■□□ 2.43
TSPAN4-207ENST00000397411 PPARAQ07869 468 aa30.21■■■□□ 2.43
TSPAN4-207ENST00000397411 CRHR2Q13324 411 aa30.21■■■□□ 2.43
TSPAN4-207ENST00000397411 SEPT2Q15019 361 aa30.21■■■□□ 2.43
TSPAN4-207ENST00000397411 TMEM179Q6ZVK1 233 aa30.21■■■□□ 2.43
TSPAN4-207ENST00000397411 ZNF444Q8N0Y2 327 aaPredicted RBP30.21■■■□□ 2.43
TSPAN4-207ENST00000397411 CASP8AP2Q9UKL3 1982 aa30.21■■■□□ 2.43
TSPAN4-207ENST00000397411 C19orf81C9J6K1 198 aa30.2■■■□□ 2.43
TSPAN4-207ENST00000397411 AKR1B1P15121 316 aa30.2■■■□□ 2.43
TSPAN4-207ENST00000397411 BACE1P56817 501 aa30.2■■■□□ 2.43
TSPAN4-207ENST00000397411 PDE4BQ07343 736 aa30.2■■■□□ 2.43
TSPAN4-207ENST00000397411 MTMR2Q13614 643 aa30.2■■■□□ 2.43
TSPAN4-207ENST00000397411 ALX1Q15699 326 aa30.2■■■□□ 2.43
TSPAN4-207ENST00000397411 CFHR5Q9BXR6 569 aa30.2■■■□□ 2.43
TSPAN4-207ENST00000397411 GPR25O00155 361 aa30.19■■■□□ 2.42
TSPAN4-207ENST00000397411 R3HDMLQ9H3Y0 253 aa30.19■■■□□ 2.42
TSPAN4-207ENST00000397411 FGAP02671 866 aa30.18■■■□□ 2.42
TSPAN4-207ENST00000397411 CHMLP26374 656 aa30.18■■■□□ 2.42
TSPAN4-207ENST00000397411 MOGSQ13724 837 aa30.18■■■□□ 2.42
TSPAN4-207ENST00000397411 PROCA1Q8NCQ7 364 aaPredicted RBP30.18■■■□□ 2.42
TSPAN4-207ENST00000397411 PABPC4Q13310 644 aaKnown RBP eCLIP30.17■■■□□ 2.42
TSPAN4-207ENST00000397411 GPAT2Q6NUI2 795 aa30.17■■■□□ 2.42
TSPAN4-207ENST00000397411 USP17L2Q6R6M4 530 aa30.17■■■□□ 2.42
TSPAN4-207ENST00000397411 PTPRFP10586 1907 aa30.17■■■□□ 2.42
TSPAN4-207ENST00000397411 FOXP2O15409 715 aa30.16■■■□□ 2.42
TSPAN4-207ENST00000397411 FKTNO75072 461 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms