RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CHST3Q7LGC8 479 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 NEDD1Q8NHV4 660 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 HOOK2Q96ED9 719 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 MAP3K14Q99558 947 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 TACC3Q9Y6A5 838 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 ZBTB43O43298 467 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 SEC23AQ15436 765 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 APOA5Q6Q788 366 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 CRACR2BQ8N4Y2 399 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 GPRC5DQ9NZD1 345 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 ZNF541Q9H0D2 1346 aa22.28■■□□□ 1.16
TSPAN4-204ENST00000397404 TBC1D12O60347 775 aa22.27■■□□□ 1.16
TSPAN4-204ENST00000397404 DDAH1O94760 285 aa22.27■■□□□ 1.16
TSPAN4-204ENST00000397404 RASA1P20936 1047 aa22.27■■□□□ 1.16
TSPAN4-204ENST00000397404 LMOD1P29536 600 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-204ENST00000397404 TFAP4Q01664 338 aa22.27■■□□□ 1.16
TSPAN4-204ENST00000397404 COL9A3Q14050 684 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-204ENST00000397404 CATIPQ7Z7H3 387 aa22.27■■□□□ 1.16
TSPAN4-204ENST00000397404 CCDC83Q8IWF9 413 aa22.27■■□□□ 1.16
TSPAN4-204ENST00000397404 ZSCAN29Q8IWY8 852 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-204ENST00000397404 GOLGA8BA8MQT2 603 aa22.26■■□□□ 1.15
TSPAN4-204ENST00000397404 PRDM1O75626 825 aa22.26■■□□□ 1.15
TSPAN4-204ENST00000397404 METAP2P50579 478 aaKnown RBP eCLIP22.26■■□□□ 1.15
TSPAN4-204ENST00000397404 ENAHQ8N8S7 591 aaPredicted RBP22.26■■□□□ 1.15
TSPAN4-204ENST00000397404 DYNLL2Q96FJ2 89 aa22.26■■□□□ 1.15
TSPAN4-204ENST00000397404 INCENPQ9NQS7 918 aa22.26■■□□□ 1.15
TSPAN4-204ENST00000397404 PPP2R3BQ9Y5P8 575 aa22.26■■□□□ 1.15
TSPAN4-204ENST00000397404 KIF4BQ2VIQ3 1234 aa22.25■■□□□ 1.15
TSPAN4-204ENST00000397404 C9orf131Q5VYM1 1079 aa22.25■■□□□ 1.15
TSPAN4-204ENST00000397404 APOBEC3FQ8IUX4 373 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-204ENST00000397404 RBM28Q9NW13 759 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-204ENST00000397404 CPLX1O14810 134 aa22.24■■□□□ 1.15
TSPAN4-204ENST00000397404 LARGE1O95461 756 aa22.24■■□□□ 1.15
TSPAN4-204ENST00000397404 NOVP48745 357 aa22.24■■□□□ 1.15
TSPAN4-204ENST00000397404 SCRN1Q12765 414 aa22.24■■□□□ 1.15
TSPAN4-204ENST00000397404 TATDN1Q6P1N9 297 aa22.24■■□□□ 1.15
TSPAN4-204ENST00000397404 CSRNP1Q96S65 589 aa22.24■■□□□ 1.15
TSPAN4-204ENST00000397404 MYH8P13535 1937 aa22.24■■□□□ 1.15
TSPAN4-204ENST00000397404 PITPNM2Q9BZ72 1349 aa22.23■■□□□ 1.15
TSPAN4-204ENST00000397404 TCP10Q12799 353 aa22.23■■□□□ 1.15
TSPAN4-204ENST00000397404 SPRYD3Q8NCJ5 442 aa22.23■■□□□ 1.15
TSPAN4-204ENST00000397404 SMARCC2Q8TAQ2 1214 aa22.23■■□□□ 1.15
TSPAN4-204ENST00000397404 L3MBTL3Q96JM7 780 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-204ENST00000397404 GINM1Q9NU53 330 aa22.23■■□□□ 1.15
TSPAN4-204ENST00000397404 BRPF3Q9ULD4 1205 aa22.23■■□□□ 1.15
TSPAN4-204ENST00000397404 SYNPO2Q9UMS6 1093 aa22.23■■□□□ 1.15
TSPAN4-204ENST00000397404 PCDHAC2Q9Y5I4 1007 aa22.23■■□□□ 1.15
TSPAN4-204ENST00000397404 ZNF654Q8IZM8 581 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 STK11IPQ8N1F8 1099 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 KAT14Q9H8E8 782 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 VEZTQ9HBM0 779 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 ADARB2Q9NS39 739 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 NAP1L2Q9ULW6 460 aaPredicted RBP22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 DDTLA6NHG4 134 aaPredicted RBP22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 KIF5BP33176 963 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 SHMT1P34896 483 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 CACNB3P54284 484 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 MAP3K10Q02779 954 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 STK3Q13188 491 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 NBPF9Q3BBW0 867 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 LARP6Q9BRS8 491 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 HPS5Q9UPZ3 1129 aa22.22■■□□□ 1.15
TSPAN4-204ENST00000397404 WDR33Q9C0J8 1336 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-204ENST00000397404 CLRN2A0PK11 232 aa22.21■■□□□ 1.15
TSPAN4-204ENST00000397404 GOLGA8AA7E2F4 631 aa22.21■■□□□ 1.15
TSPAN4-204ENST00000397404 TCP10L2B9ZVM9 353 aa22.21■■□□□ 1.15
TSPAN4-204ENST00000397404 GJB2P29033 226 aa22.21■■□□□ 1.15
TSPAN4-204ENST00000397404 FAM47AQ5JRC9 791 aa22.21■■□□□ 1.15
TSPAN4-204ENST00000397404 NECAB1Q8N987 351 aa22.21■■□□□ 1.15
TSPAN4-204ENST00000397404 CNTNAP1P78357 1384 aa22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 TOP1P11387 765 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 GNAQP50148 359 aa22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 RAB3GAP1Q15042 981 aa22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 RTN1Q16799 776 aa22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 CERKLQ49MI3 558 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 SH3BP5LQ7L8J4 393 aa22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 FAM184AQ8NB25 1140 aa22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 FANCBQ8NB91 859 aa22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 SLC44A5Q8NCS7 719 aa22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 NSUN7Q8NE18 718 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 ZKSCAN3Q9BRR0 538 aa22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 RBM27Q9P2N5 1060 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-204ENST00000397404 STK36Q9NRP7 1315 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 SMIM22K7EJ46 135 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 ST3GAL1Q11201 340 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 TROAPQ12815 778 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 TMEM179Q6ZVK1 233 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 MICU3Q86XE3 530 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 ZFPM1Q8IX07 1006 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 CTCFLQ8NI51 663 aaPredicted RBP22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 WASF1Q92558 559 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 GPHNQ9NQX3 736 aaPredicted RBP22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 IL17RBQ9NRM6 502 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 ATP6V1DQ9Y5K8 247 aa22.19■■□□□ 1.14
TSPAN4-204ENST00000397404 IGKV6D-41A0A0C4DH26 115 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 TTLL1O95922 423 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 IFNAR1P17181 557 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 SLC4A8Q2Y0W8 1093 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 RCSD1Q6JBY9 416 aa22.18■■□□□ 1.14
TSPAN4-204ENST00000397404 LZTS2Q9BRK4 669 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms