RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 STX17P56962 302 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 RBL2Q08999 1139 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 MORC3Q14149 939 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 SLC9C2Q5TAH2 1124 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 PNKPQ96T60 521 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 TEX13AQ9BXU3 409 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-206ENST00000397163 NBPF3Q9H094 633 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 CXorf56Q9H5V9 222 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 ABCB6Q9NP58 842 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 UBN2Q6ZU65 1347 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 CTAGE9A4FU28 777 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 PLCD1P51178 756 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 HSP90B2PQ58FF3 399 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 DIS3L2Q8IYB7 885 aaKnown RBP10.41□□□□□ -0.74
CAPN3-206ENST00000397163 HNRNPLLQ8WVV9 542 aaKnown RBP10.41□□□□□ -0.74
CAPN3-206ENST00000397163 KCNJ14Q9UNX9 436 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 SLC12A7Q9Y666 1083 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 A0A1B0GTH6 734 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 IVLP07476 585 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 PTPREP23469 700 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 NTRK3Q16288 839 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 ELOA2Q8IYF1 753 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-206ENST00000397163 TRIML1Q8N9V2 468 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 TMEM87BQ96K49 555 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 MED15Q96RN5 788 aa10.41□□□□□ -0.74
CAPN3-206ENST00000397163 CYP27B1O15528 508 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 IDH1O75874 414 aaKnown RBP10.4□□□□□ -0.74
CAPN3-206ENST00000397163 A1BGP04217 495 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 SARSP49591 514 aaKnown RBP10.4□□□□□ -0.74
CAPN3-206ENST00000397163 LIG3P49916 1009 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 LRRC31Q6UY01 552 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 CCDC82Q8N4S0 544 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 PPM1EQ8WY54 764 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 NAA15Q9BXJ9 866 aaKnown RBP10.4□□□□□ -0.74
CAPN3-206ENST00000397163 FBXO2Q9UK22 296 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-206ENST00000397163 SIPA1L3O60292 1781 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-206ENST00000397163 AFDNP55196 1824 aaKnown RBP10.4□□□□□ -0.74
CAPN3-206ENST00000397163 IFIT3O14879 490 aaKnown RBP10.4□□□□□ -0.74
CAPN3-206ENST00000397163 CCDC172P0C7W6 258 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 TOB1P50616 345 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-206ENST00000397163 PIP4K2BP78356 416 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 FILIP1LQ4L180 1135 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 NT5DC1Q5TFE4 455 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 KANK3Q6NY19 840 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 KRT28Q7Z3Y7 464 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 SLC35F6Q8N357 371 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 WASF1Q92558 559 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 RAB21Q9UL25 225 aa10.4□□□□□ -0.74
CAPN3-206ENST00000397163 ZNF330Q9Y3S2 320 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-206ENST00000397163 CTAGE15A4D2H0 777 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CTAGE8P0CG41 777 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 ERCC5P28715 1186 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-206ENST00000397163 AFMP43652 599 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 MNAT1P51948 309 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CTAGE6Q86UF2 777 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CTAGE4Q8IX94 777 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CNPY4Q8N129 248 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 MSANTD4Q8NCY6 345 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CDC5LQ99459 802 aaKnown RBP10.39□□□□□ -0.75
CAPN3-206ENST00000397163 GBP3Q9H0R5 595 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 INCENPQ9NQS7 918 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 FAM217BQ9NTX9 383 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-206ENST00000397163 L1RE1Q9UN81 338 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CEP83Q9Y592 693 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 SLIT3O75094 1523 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 BRD2P25440 801 aaKnown RBP10.39□□□□□ -0.75
CAPN3-206ENST00000397163 GUCY1A2P33402 732 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 ADD2P35612 726 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 USP5P45974 858 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 TUBB2AQ13885 445 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 RILPL1Q5EBL4 403 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 FBXW10Q5XX13 1052 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 BRINP3Q76B58 766 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 TRIM22Q8IYM9 498 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 IGDCC4Q8TDY8 1250 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 TUBB2BQ9BVA1 445 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 LY9Q9HBG7 655 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 SEC31BQ9NQW1 1179 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.39□□□□□ -0.75
CAPN3-206ENST00000397163 PCDHB6Q9Y5E3 794 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CLGNO14967 610 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 MFAP3LO75121 409 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 MMP1P03956 469 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CASP14P31944 242 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CORO7P57737 925 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 VSNL1P62760 191 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 CASP8Q14790 479 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 SPATA1Q5VX52 437 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 USP49Q70CQ1 688 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 IQUBQ8NA54 791 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 ACRBPQ8NEB7 543 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 KAT2BQ92831 832 aa10.39□□□□□ -0.75
CAPN3-206ENST00000397163 NAPGQ99747 312 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-206ENST00000397163 SYNRGQ9UMZ2 1314 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 ACTN4O43707 911 aaKnown RBP10.38□□□□□ -0.75
CAPN3-206ENST00000397163 FMNL1O95466 1100 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-206ENST00000397163 TUBB4BP68371 445 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 METTL24Q5JXM2 366 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 RASGRP2Q7LDG7 609 aa10.38□□□□□ -0.75
CAPN3-206ENST00000397163 GDAP1L1Q96MZ0 367 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms