RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CALML3P27482 149 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 ARHGAP4P98171 946 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 AFAP1Q8N556 730 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 CEP19Q96LK0 163 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 RASIP1Q5U651 963 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 CCDC13Q8IYE1 715 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 PPWD1Q96BP3 646 aaKnown RBP13.65□□□□□ -0.22
SMU1-201ENST00000397149 AZI2Q9H6S1 392 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 POLKQ9UBT6 870 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 TRPA1O75762 1119 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 ANGPTL8Q6UXH0 198 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 FAM186BQ8IYM0 893 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 DDX17Q92841 729 aaKnown RBP13.65□□□□□ -0.22
SMU1-201ENST00000397149 TMX3Q96JJ7 454 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 BCAP29Q9UHQ4 241 aa13.65□□□□□ -0.22
SMU1-201ENST00000397149 CALUO43852 315 aaPredicted RBP13.64□□□□□ -0.23
SMU1-201ENST00000397149 RAPH1Q70E73 1250 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 HMG20BQ9P0W2 317 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 SMARCA2P51531 1590 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 TTC4O95801 387 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 TROVE2P10155 538 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMU1-201ENST00000397149 TNNI1P19237 187 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 EEF1B2P24534 225 aaKnown RBP13.64□□□□□ -0.23
SMU1-201ENST00000397149 GNA11P29992 359 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 TXKP42681 527 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 DENND2CQ68D51 928 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 CDAN1Q8IWY9 1227 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 FAM193BQ96PV7 902 aaPredicted RBP13.64□□□□□ -0.23
SMU1-201ENST00000397149 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 RBM8AQ9Y5S9 174 aaKnown RBP13.64□□□□□ -0.23
SMU1-201ENST00000397149 KRT33BQ14525 404 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 ADAT2Q7Z6V5 191 aaKnown RBP13.64□□□□□ -0.23
SMU1-201ENST00000397149 RIPOR2Q9Y4F9 1068 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 GUCY2FP51841 1108 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 IQCB1Q15051 598 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 IFT20Q8IY31 132 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 MYCT1Q8N699 235 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 DDX41Q9UJV9 622 aaKnown RBP13.64□□□□□ -0.23
SMU1-201ENST00000397149 NELFCDQ8IXH7 590 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 GANCQ8TET4 914 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 ANAPC5Q9UJX4 755 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 GSTA4O15217 222 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 WBP4O75554 376 aaKnown RBP13.64□□□□□ -0.23
SMU1-201ENST00000397149 HLA-DPA1P20036 260 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 TRMT10CQ7L0Y3 403 aaKnown RBP13.64□□□□□ -0.23
SMU1-201ENST00000397149 DYMQ7RTS9 669 aa13.64□□□□□ -0.23
SMU1-201ENST00000397149 ZCRB1Q8TBF4 217 aaKnown RBP13.64□□□□□ -0.23
SMU1-201ENST00000397149 HMGB1P1B2RPK0 211 aaPredicted RBP13.63□□□□□ -0.23
SMU1-201ENST00000397149 GCNT3O95395 438 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 RASSF2P50749 326 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 TYRO3Q06418 890 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.63□□□□□ -0.23
SMU1-201ENST00000397149 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 KAZNQ674X7 775 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 DNAJC8O75937 253 aaPredicted RBP13.63□□□□□ -0.23
SMU1-201ENST00000397149 TMED1Q13445 227 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 STAG1Q8WVM7 1258 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 ORC6Q9Y5N6 252 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
SMU1-201ENST00000397149 LMCD1Q9NZU5 365 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 MOSPD1Q9UJG1 213 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 BNIP3LO60238 219 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 RCN2Q14257 317 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 NAPGQ99747 312 aaPredicted RBP13.63□□□□□ -0.23
SMU1-201ENST00000397149 NBPF3Q9H094 633 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 INPP5FQ9Y2H2 1132 aa13.63□□□□□ -0.23
SMU1-201ENST00000397149 DNM2P50570 870 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 IGSF22Q8N9C0 903 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 MTRQ99707 1265 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 TEKT2Q9UIF3 430 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 MAD1L1Q9Y6D9 718 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 A0A1B0GVL5 298 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 CCDC85BQ15834 202 aaPredicted RBP13.62□□□□□ -0.23
SMU1-201ENST00000397149 RINLQ6ZS11 566 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 FYCO1Q9BQS8 1478 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 DAB2P98082 770 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 ZBTB17Q13105 803 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 KRT71Q3SY84 523 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 C20orf194Q5TEA3 1177 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 C8orf37Q96NL8 207 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 SUGT1Q9Y2Z0 365 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 CAVIN2O95810 425 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
SMU1-201ENST00000397149 ZC3H12BQ5HYM0 836 aaKnown RBP13.62□□□□□ -0.23
SMU1-201ENST00000397149 NFKBIL1Q9UBC1 381 aaPredicted RBP13.62□□□□□ -0.23
SMU1-201ENST00000397149 FAM95CA0A1B0GW59 222 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 MCMDC2Q4G0Z9 681 aa13.62□□□□□ -0.23
SMU1-201ENST00000397149 MAP3K21Q5TCX8 1036 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 PNMA2Q9UL42 364 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 LDHBP07195 334 aaKnown RBP13.61□□□□□ -0.23
SMU1-201ENST00000397149 PHLDB3Q6NSJ2 640 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 SND1Q7KZF4 910 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMU1-201ENST00000397149 SLC13A4Q9UKG4 626 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 EXOC7Q9UPT5 735 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 HIP1RO75146 1068 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 SLC9C1Q4G0N8 1177 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 RTL9Q8NET4 1388 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 PDS5BQ9NTI5 1447 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 EXOC3O60645 756 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms