RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 HMGCS2P54868 508 aa16.7■□□□□ 0.26
SEC13-205ENST00000397101 TRIM32Q13049 653 aa16.7■□□□□ 0.26
SEC13-205ENST00000397101 B4GALNT3Q6L9W6 998 aa16.7■□□□□ 0.26
SEC13-205ENST00000397101 Q7L0L9 218 aa16.7■□□□□ 0.26
SEC13-205ENST00000397101 ERICH6Q7L0X2 663 aa16.7■□□□□ 0.26
SEC13-205ENST00000397101 WDR18Q9BV38 432 aa16.7■□□□□ 0.26
SEC13-205ENST00000397101 UBE2OQ9C0C9 1292 aaKnown RBP16.7■□□□□ 0.26
SEC13-205ENST00000397101 HERC5Q9UII4 1024 aaKnown RBP16.7■□□□□ 0.26
SEC13-205ENST00000397101 DDX60LQ5H9U9 1706 aaKnown RBP16.7■□□□□ 0.26
SEC13-205ENST00000397101 EYSQ5T1H1 3165 aa16.69■□□□□ 0.26
SEC13-205ENST00000397101 LDHCP07864 332 aa16.69■□□□□ 0.26
SEC13-205ENST00000397101 SYN1P17600 705 aa16.69■□□□□ 0.26
SEC13-205ENST00000397101 ADORA1P30542 326 aa16.69■□□□□ 0.26
SEC13-205ENST00000397101 ATP8B2P98198 1209 aa16.69■□□□□ 0.26
SEC13-205ENST00000397101 CEP85Q6P2H3 762 aa16.69■□□□□ 0.26
SEC13-205ENST00000397101 NUDT12Q9BQG2 462 aa16.69■□□□□ 0.26
SEC13-205ENST00000397101 SPTBN5Q9NRC6 3674 aaKnown RBP16.68■□□□□ 0.26
SEC13-205ENST00000397101 SRGAP3O43295 1099 aa16.68■□□□□ 0.26
SEC13-205ENST00000397101 PRKAR2AP13861 404 aaKnown RBP16.68■□□□□ 0.26
SEC13-205ENST00000397101 GSTO1P78417 241 aa16.68■□□□□ 0.26
SEC13-205ENST00000397101 MECOMQ03112 1051 aa16.68■□□□□ 0.26
SEC13-205ENST00000397101 GTF3C2Q8WUA4 911 aaPredicted RBP16.68■□□□□ 0.26
SEC13-205ENST00000397101 GINM1Q9NU53 330 aa16.68■□□□□ 0.26
SEC13-205ENST00000397101 AKAP2Q9Y2D5 859 aa16.68■□□□□ 0.26
SEC13-205ENST00000397101 POTEB2H3BUK9 544 aa16.67■□□□□ 0.26
SEC13-205ENST00000397101 CYP2B6P20813 491 aa16.67■□□□□ 0.26
SEC13-205ENST00000397101 MAPK4P31152 587 aa16.67■□□□□ 0.26
SEC13-205ENST00000397101 BACE1P56817 501 aa16.67■□□□□ 0.26
SEC13-205ENST00000397101 GPRC5AQ8NFJ5 357 aa16.67■□□□□ 0.26
SEC13-205ENST00000397101 ZNF384Q8TF68 577 aa16.67■□□□□ 0.26
SEC13-205ENST00000397101 USP6NLQ92738 828 aa16.67■□□□□ 0.26
SEC13-205ENST00000397101 NSUN4Q96CB9 384 aaKnown RBP16.67■□□□□ 0.26
SEC13-205ENST00000397101 PLXNB2O15031 1838 aa16.67■□□□□ 0.26
SEC13-205ENST00000397101 C19orf81C9J6K1 198 aa16.66■□□□□ 0.26
SEC13-205ENST00000397101 ASNSP08243 561 aa16.66■□□□□ 0.26
SEC13-205ENST00000397101 TIMM10P62072 90 aa16.66■□□□□ 0.26
SEC13-205ENST00000397101 IRX3P78415 501 aaPredicted RBP16.66■□□□□ 0.26
SEC13-205ENST00000397101 RRP1BQ14684 758 aaKnown RBP16.66■□□□□ 0.26
SEC13-205ENST00000397101 XAGE2Q96GT9 111 aa16.66■□□□□ 0.26
SEC13-205ENST00000397101 COL25A1Q9BXS0 654 aaPredicted RBP16.66■□□□□ 0.26
SEC13-205ENST00000397101 DHX36Q9H2U1 1008 aaKnown RBP16.66■□□□□ 0.26
SEC13-205ENST00000397101 PI4KBQ9UBF8 816 aa16.66■□□□□ 0.26
SEC13-205ENST00000397101 PA2G4Q9UQ80 394 aaKnown RBP16.66■□□□□ 0.26
SEC13-205ENST00000397101 A0A1B0GUL7 405 aa16.65■□□□□ 0.26
SEC13-205ENST00000397101 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
SEC13-205ENST00000397101 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
SEC13-205ENST00000397101 HERVK_113P62684 666 aa16.65■□□□□ 0.26
SEC13-205ENST00000397101 CACNB2Q08289 660 aaPredicted RBP16.65■□□□□ 0.26
SEC13-205ENST00000397101 LHX8Q68G74 356 aa16.65■□□□□ 0.26
SEC13-205ENST00000397101 METTL16Q86W50 562 aaKnown RBP16.65■□□□□ 0.26
SEC13-205ENST00000397101 P2RX7Q99572 595 aaKnown RBP16.65■□□□□ 0.26
SEC13-205ENST00000397101 TMOD4Q9NZQ9 345 aa16.65■□□□□ 0.26
SEC13-205ENST00000397101 PNMA6EA0A0J9YXQ4 647 aa16.64■□□□□ 0.25
SEC13-205ENST00000397101 RGS2P41220 211 aa16.64■□□□□ 0.25
SEC13-205ENST00000397101 MORN1Q5T089 497 aa16.64■□□□□ 0.25
SEC13-205ENST00000397101 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.64■□□□□ 0.25
SEC13-205ENST00000397101 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
SEC13-205ENST00000397101 CDH23Q9H251 3354 aa16.64■□□□□ 0.25
SEC13-205ENST00000397101 IGSF3O75054 1194 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 IGHDP01880 384 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 ERVK-9P63128 1117 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 ERVK-24P63145 666 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 OS9Q13438 667 aaPredicted RBP16.63■□□□□ 0.25
SEC13-205ENST00000397101 HDAC1Q13547 482 aaPredicted RBP16.63■□□□□ 0.25
SEC13-205ENST00000397101 MTMR2Q13614 643 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 LRRC26Q2I0M4 334 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 SIRT2Q8IXJ6 389 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 APBA2Q99767 749 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 TXNRD2Q9NNW7 524 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 HMG20BQ9P0W2 317 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 RBPJLQ9UBG7 517 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
SEC13-205ENST00000397101 USP17L10C9JJH3 530 aa16.62■□□□□ 0.25
SEC13-205ENST00000397101 SURF6O75683 361 aaKnown RBP16.62■□□□□ 0.25
SEC13-205ENST00000397101 ARID4AP29374 1257 aaPredicted RBP16.62■□□□□ 0.25
SEC13-205ENST00000397101 GPR142Q7Z601 462 aa16.62■□□□□ 0.25
SEC13-205ENST00000397101 FOXP4Q8IVH2 680 aaPredicted RBP16.62■□□□□ 0.25
SEC13-205ENST00000397101 TEX11Q8IYF3 940 aa16.62■□□□□ 0.25
SEC13-205ENST00000397101 SPATA5Q8NB90 893 aa16.62■□□□□ 0.25
SEC13-205ENST00000397101 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
SEC13-205ENST00000397101 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
SEC13-205ENST00000397101 PRUNE2Q8WUY3 3088 aa16.62■□□□□ 0.25
SEC13-205ENST00000397101 MUC3AQ02505 3323 aa16.61■□□□□ 0.25
SEC13-205ENST00000397101 APBB1O00213 710 aa16.61■□□□□ 0.25
SEC13-205ENST00000397101 MSCO60682 206 aa16.61■□□□□ 0.25
SEC13-205ENST00000397101 PLCG2P16885 1265 aa16.61■□□□□ 0.25
SEC13-205ENST00000397101 G3BP1Q13283 466 aaKnown RBP eCLIP16.61■□□□□ 0.25
SEC13-205ENST00000397101 MTX1Q13505 466 aa16.61■□□□□ 0.25
SEC13-205ENST00000397101 CENPQQ7L2Z9 268 aaPredicted RBP16.61■□□□□ 0.25
SEC13-205ENST00000397101 PLEKHH3Q7Z736 793 aa16.61■□□□□ 0.25
SEC13-205ENST00000397101 SSH3Q8TE77 659 aa16.61■□□□□ 0.25
SEC13-205ENST00000397101 BAG3O95817 575 aa16.6■□□□□ 0.25
SEC13-205ENST00000397101 CCND3P30281 292 aaPredicted RBP16.6■□□□□ 0.25
SEC13-205ENST00000397101 PPP4CP60510 307 aa16.6■□□□□ 0.25
SEC13-205ENST00000397101 MDM2Q00987 491 aaPredicted RBP16.6■□□□□ 0.25
SEC13-205ENST00000397101 POLA2Q14181 598 aa16.6■□□□□ 0.25
SEC13-205ENST00000397101 Q3C1V9 767 aa16.6■□□□□ 0.25
SEC13-205ENST00000397101 CCAR1Q8IX12 1150 aaKnown RBP16.6■□□□□ 0.25
SEC13-205ENST00000397101 PORCNQ9H237 461 aa16.6■□□□□ 0.25
SEC13-205ENST00000397101 TFCP2Q12800 502 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms